RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 CMTR2Q8IYT2 770 aaKnown RBP13.66□□□□□ -0.22
SF1-202ENST00000334944 SEPT8Q92599 483 aa13.66□□□□□ -0.22
SF1-202ENST00000334944 L3HYPDHQ96EM0 354 aa13.66□□□□□ -0.22
SF1-202ENST00000334944 TEX37Q96LM6 180 aa13.66□□□□□ -0.22
SF1-202ENST00000334944 MUS81Q96NY9 551 aa13.66□□□□□ -0.22
SF1-202ENST00000334944 SH3GL1Q99961 368 aa13.66□□□□□ -0.22
SF1-202ENST00000334944 TRIM39Q9HCM9 518 aa13.66□□□□□ -0.22
SF1-202ENST00000334944 TAS2R13Q9NYV9 303 aa13.66□□□□□ -0.22
SF1-202ENST00000334944 PCM1Q15154 2024 aa13.66□□□□□ -0.22
SF1-202ENST00000334944 TCRBV3S1A0A5B6 114 aa13.66□□□□□ -0.22
SF1-202ENST00000334944 H0Y626 953 aa13.66□□□□□ -0.22
SF1-202ENST00000334944 SNPHO15079 494 aa13.66□□□□□ -0.22
SF1-202ENST00000334944 HOXC11O43248 304 aaPredicted RBP13.66□□□□□ -0.22
SF1-202ENST00000334944 ICMTO60725 284 aa13.66□□□□□ -0.22
SF1-202ENST00000334944 ALDH1A1P00352 501 aa13.66□□□□□ -0.22
SF1-202ENST00000334944 SPNP16150 400 aa13.66□□□□□ -0.22
SF1-202ENST00000334944 CAPN3P20807 821 aa13.66□□□□□ -0.22
SF1-202ENST00000334944 TTKP33981 857 aa13.66□□□□□ -0.22
SF1-202ENST00000334944 CA5AP35218 305 aa13.66□□□□□ -0.22
SF1-202ENST00000334944 CDH4P55283 916 aa13.66□□□□□ -0.22
SF1-202ENST00000334944 STX1BP61266 288 aa13.66□□□□□ -0.22
SF1-202ENST00000334944 RPS6KA2Q15349 733 aa13.66□□□□□ -0.22
SF1-202ENST00000334944 RSBN1Q5VWQ0 802 aaPredicted RBP13.66□□□□□ -0.22
SF1-202ENST00000334944 ERMP1Q7Z2K6 904 aa13.66□□□□□ -0.22
SF1-202ENST00000334944 RAB44Q7Z6P3 723 aaPredicted RBP13.66□□□□□ -0.22
SF1-202ENST00000334944 ANKK1Q8NFD2 765 aa13.66□□□□□ -0.22
SF1-202ENST00000334944 CAPNS2Q96L46 248 aa13.66□□□□□ -0.22
SF1-202ENST00000334944 CDK5RAP1Q96SZ6 601 aaKnown RBP13.66□□□□□ -0.22
SF1-202ENST00000334944 CLSTN3Q9BQT9 956 aa13.66□□□□□ -0.22
SF1-202ENST00000334944 NLE1Q9NVX2 485 aaPredicted RBP13.66□□□□□ -0.22
SF1-202ENST00000334944 PKD2L2Q9NZM6 624 aa13.66□□□□□ -0.22
SF1-202ENST00000334944 C2orf81A6NN90 581 aa13.65□□□□□ -0.22
SF1-202ENST00000334944 KDELR3O43731 214 aa13.65□□□□□ -0.22
SF1-202ENST00000334944 TBL1XO60907 577 aa13.65□□□□□ -0.22
SF1-202ENST00000334944 CD160O95971 181 aa13.65□□□□□ -0.22
SF1-202ENST00000334944 HSPA1AP0DMV8 641 aaKnown RBP13.65□□□□□ -0.22
SF1-202ENST00000334944 HSPA1BP0DMV9 641 aaKnown RBP13.65□□□□□ -0.22
SF1-202ENST00000334944 ZXDBP98169 803 aa13.65□□□□□ -0.22
SF1-202ENST00000334944 CEP78Q5JTW2 689 aa13.65□□□□□ -0.22
SF1-202ENST00000334944 SNAP47Q5SQN1 464 aa13.65□□□□□ -0.22
SF1-202ENST00000334944 CATSPEREQ5SY80 951 aa13.65□□□□□ -0.22
SF1-202ENST00000334944 SPATC1Q76KD6 591 aa13.65□□□□□ -0.22
SF1-202ENST00000334944 GATAD2AQ86YP4 633 aa13.65□□□□□ -0.22
SF1-202ENST00000334944 FAM126BQ8IXS8 530 aa13.65□□□□□ -0.22
SF1-202ENST00000334944 FUBP1Q96AE4 644 aaKnown RBP13.65□□□□□ -0.22
SF1-202ENST00000334944 SUCOQ9UBS9 1254 aaKnown RBP13.65□□□□□ -0.22
SF1-202ENST00000334944 POLG2Q9UHN1 485 aa13.65□□□□□ -0.22
SF1-202ENST00000334944 EIF2B4Q9UI10 523 aaKnown RBP13.65□□□□□ -0.22
SF1-202ENST00000334944 MAGED1Q9Y5V3 778 aaPredicted RBP13.65□□□□□ -0.22
SF1-202ENST00000334944 ANKRD66B4E2M5 251 aa13.65□□□□□ -0.22
SF1-202ENST00000334944 H7C4K7 107 aa13.65□□□□□ -0.22
SF1-202ENST00000334944 STX7O15400 261 aaKnown RBP13.65□□□□□ -0.22
SF1-202ENST00000334944 MTHFD1P11586 935 aaKnown RBP13.65□□□□□ -0.22
SF1-202ENST00000334944 PRKCAP17252 672 aa13.65□□□□□ -0.22
SF1-202ENST00000334944 GPX3P22352 226 aa13.65□□□□□ -0.22
SF1-202ENST00000334944 HTR1BP28222 390 aa13.65□□□□□ -0.22
SF1-202ENST00000334944 TGFBR1P36897 503 aa13.65□□□□□ -0.22
SF1-202ENST00000334944 RBBP7Q16576 425 aa13.65□□□□□ -0.22
SF1-202ENST00000334944 FUT11Q495W5 492 aa13.65□□□□□ -0.22
SF1-202ENST00000334944 TXNDC8Q6A555 127 aa13.65□□□□□ -0.22
SF1-202ENST00000334944 XAF1Q6GPH4 301 aa13.65□□□□□ -0.22
SF1-202ENST00000334944 CXorf57Q6NSI4 855 aaKnown RBP13.65□□□□□ -0.22
SF1-202ENST00000334944 PRR23CQ6ZRP0 262 aa13.65□□□□□ -0.22
SF1-202ENST00000334944 CLDN19Q8N6F1 224 aa13.65□□□□□ -0.22
SF1-202ENST00000334944 ANKFN1Q8N957 763 aa13.65□□□□□ -0.22
SF1-202ENST00000334944 FATE1Q969F0 183 aa13.65□□□□□ -0.22
SF1-202ENST00000334944 EID2BQ96D98 161 aa13.65□□□□□ -0.22
SF1-202ENST00000334944 LINGO1Q96FE5 620 aa13.65□□□□□ -0.22
SF1-202ENST00000334944 CCDC90BQ9GZT6 254 aa13.65□□□□□ -0.22
SF1-202ENST00000334944 UNC93B1Q9H1C4 597 aa13.65□□□□□ -0.22
SF1-202ENST00000334944 SPAG4Q9NPE6 437 aa13.65□□□□□ -0.22
SF1-202ENST00000334944 EXD2Q9NVH0 621 aa13.65□□□□□ -0.22
SF1-202ENST00000334944 COMMD10Q9Y6G5 202 aa13.65□□□□□ -0.22
SF1-202ENST00000334944 SLC22A2O15244 555 aa13.65□□□□□ -0.23
SF1-202ENST00000334944 NADKO95544 446 aaPredicted RBP13.65□□□□□ -0.23
SF1-202ENST00000334944 EPOP01588 193 aa13.65□□□□□ -0.23
SF1-202ENST00000334944 MBL2P11226 248 aaPredicted RBP13.65□□□□□ -0.23
SF1-202ENST00000334944 SHMT2P34897 504 aa13.65□□□□□ -0.23
SF1-202ENST00000334944 HK3P52790 923 aa13.65□□□□□ -0.23
SF1-202ENST00000334944 TMBIM6P55061 237 aa13.65□□□□□ -0.23
SF1-202ENST00000334944 SMAD3P84022 425 aaKnown RBP13.65□□□□□ -0.23
SF1-202ENST00000334944 RAD51Q06609 339 aa13.65□□□□□ -0.23
SF1-202ENST00000334944 AAK1Q2M2I8 961 aa13.65□□□□□ -0.23
SF1-202ENST00000334944 CYBRD1Q53TN4 286 aa13.65□□□□□ -0.23
SF1-202ENST00000334944 SIGIRRQ6IA17 410 aa13.65□□□□□ -0.23
SF1-202ENST00000334944 FAM20CQ8IXL6 584 aa13.65□□□□□ -0.23
SF1-202ENST00000334944 CDYL2Q8N8U2 506 aa13.65□□□□□ -0.23
SF1-202ENST00000334944 NDNFQ8TB73 568 aa13.65□□□□□ -0.23
SF1-202ENST00000334944 DMRTB1Q96MA1 342 aa13.65□□□□□ -0.23
SF1-202ENST00000334944 ING2Q9H160 280 aa13.65□□□□□ -0.23
SF1-202ENST00000334944 TRPM5Q9NZQ8 1165 aa13.65□□□□□ -0.23
SF1-202ENST00000334944 MAP10Q9P2G4 905 aa13.65□□□□□ -0.23
SF1-202ENST00000334944 PNMA8BQ9ULN7 279 aaPredicted RBP13.65□□□□□ -0.23
SF1-202ENST00000334944 ANKRD36A6QL64 1941 aa13.64□□□□□ -0.23
SF1-202ENST00000334944 LOC105371267A0A1B0GV96 52 aa13.64□□□□□ -0.23
SF1-202ENST00000334944 PTGES3LE9PB15 166 aa13.64□□□□□ -0.23
SF1-202ENST00000334944 ASNA1O43681 348 aa13.64□□□□□ -0.23
SF1-202ENST00000334944 IDH3BO43837 385 aa13.64□□□□□ -0.23
SF1-202ENST00000334944 CLDN11O75508 207 aa13.64□□□□□ -0.23
SF1-202ENST00000334944 CR2P20023 1033 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms