RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 RUVBL2Q9Y230 463 aaKnown RBP17.1■□□□□ 0.33
CHGA-202ENST00000334654 TRBV23OR9-2A0A075B6M9 112 aa17.09■□□□□ 0.33
CHGA-202ENST00000334654 A0A096LPK6 155 aa17.09■□□□□ 0.33
CHGA-202ENST00000334654 PRAMEF33A0A0G2JMD5 474 aa17.09■□□□□ 0.33
CHGA-202ENST00000334654 OR52A4PA6NMU1 304 aa17.09■□□□□ 0.33
CHGA-202ENST00000334654 PDZK1P1A8MUH7 402 aa17.09■□□□□ 0.33
CHGA-202ENST00000334654 CCDC166P0CW27 439 aa17.09■□□□□ 0.33
CHGA-202ENST00000334654 MPC1LP0DKB6 136 aa17.09■□□□□ 0.33
CHGA-202ENST00000334654 ENO3P13929 434 aaPredicted RBP17.09■□□□□ 0.33
CHGA-202ENST00000334654 CD59P13987 128 aa17.09■□□□□ 0.33
CHGA-202ENST00000334654 SLC19A1P41440 591 aa17.09■□□□□ 0.33
CHGA-202ENST00000334654 ABRQ12979 859 aa17.09■□□□□ 0.33
CHGA-202ENST00000334654 RPE65Q16518 533 aa17.09■□□□□ 0.33
CHGA-202ENST00000334654 C6orf132Q5T0Z8 1188 aa17.09■□□□□ 0.33
CHGA-202ENST00000334654 CLEC14AQ86T13 490 aa17.09■□□□□ 0.33
CHGA-202ENST00000334654 TRABD2AQ86V40 505 aa17.09■□□□□ 0.33
CHGA-202ENST00000334654 CNPY4Q8N129 248 aa17.09■□□□□ 0.33
CHGA-202ENST00000334654 PLD6Q8N2A8 252 aaKnown RBP17.09■□□□□ 0.33
CHGA-202ENST00000334654 SPATA6LQ8N4H0 392 aa17.09■□□□□ 0.33
CHGA-202ENST00000334654 NKAPQ8N5F7 415 aaKnown RBP17.09■□□□□ 0.33
CHGA-202ENST00000334654 LINGO1Q96FE5 620 aa17.09■□□□□ 0.33
CHGA-202ENST00000334654 TMEM9BQ9NQ34 198 aa17.09■□□□□ 0.33
CHGA-202ENST00000334654 IGSF5Q9NSI5 407 aa17.09■□□□□ 0.33
CHGA-202ENST00000334654 TSR3Q9UJK0 312 aaKnown RBP17.09■□□□□ 0.33
CHGA-202ENST00000334654 DOLKQ9UPQ8 538 aa17.09■□□□□ 0.33
CHGA-202ENST00000334654 BTBD3Q9Y2F9 522 aa17.09■□□□□ 0.33
CHGA-202ENST00000334654 ACOT9Q9Y305 439 aa17.09■□□□□ 0.33
CHGA-202ENST00000334654 CFAP20Q9Y6A4 193 aaKnown RBP17.09■□□□□ 0.33
CHGA-202ENST00000334654 ASXL3Q9C0F0 2248 aa17.08■□□□□ 0.33
CHGA-202ENST00000334654 LY6G6EA0A0G2JKS1 128 aa17.08■□□□□ 0.32
CHGA-202ENST00000334654 B4DGG1 531 aa17.08■□□□□ 0.32
CHGA-202ENST00000334654 TOP3BO95985 862 aaKnown RBP17.08■□□□□ 0.32
CHGA-202ENST00000334654 MPOP05164 745 aa17.08■□□□□ 0.32
CHGA-202ENST00000334654 SLC35G4P0C7Q5 338 aa17.08■□□□□ 0.32
CHGA-202ENST00000334654 XRCC1P18887 633 aaPredicted RBP17.08■□□□□ 0.32
CHGA-202ENST00000334654 SLC26A3P40879 764 aa17.08■□□□□ 0.32
CHGA-202ENST00000334654 UBE2IP63279 158 aaKnown RBP17.08■□□□□ 0.32
CHGA-202ENST00000334654 SLC14A1Q13336 389 aa17.08■□□□□ 0.32
CHGA-202ENST00000334654 RAPH1Q70E73 1250 aa17.08■□□□□ 0.32
CHGA-202ENST00000334654 PHC3Q8NDX5 983 aa17.08■□□□□ 0.32
CHGA-202ENST00000334654 SLC37A2Q8TED4 501 aa17.08■□□□□ 0.32
CHGA-202ENST00000334654 ASB11Q8WXH4 323 aa17.08■□□□□ 0.32
CHGA-202ENST00000334654 TFGQ92734 400 aaPredicted RBP17.08■□□□□ 0.32
CHGA-202ENST00000334654 DLG3Q92796 817 aa17.08■□□□□ 0.32
CHGA-202ENST00000334654 PGM2Q96G03 612 aa17.08■□□□□ 0.32
CHGA-202ENST00000334654 PKNOX2Q96KN3 472 aa17.08■□□□□ 0.32
CHGA-202ENST00000334654 C12orf66Q96MD2 445 aa17.08■□□□□ 0.32
CHGA-202ENST00000334654 GPR78Q96P69 363 aa17.08■□□□□ 0.32
CHGA-202ENST00000334654 U3KQA8 63 aa17.08■□□□□ 0.32
CHGA-202ENST00000334654 C4orf47A7E2U8 309 aa17.07■□□□□ 0.32
CHGA-202ENST00000334654 GFYI3L273 518 aa17.07■□□□□ 0.32
CHGA-202ENST00000334654 GOLGA8RI6L899 631 aa17.07■□□□□ 0.32
CHGA-202ENST00000334654 SIGLEC6O43699 453 aa17.07■□□□□ 0.32
CHGA-202ENST00000334654 FOXD2O60548 495 aaPredicted RBP17.07■□□□□ 0.32
CHGA-202ENST00000334654 PSIP1O75475 530 aaKnown RBP17.07■□□□□ 0.32
CHGA-202ENST00000334654 MT-ND3P03897 115 aa17.07■□□□□ 0.32
CHGA-202ENST00000334654 PYGBP11216 843 aa17.07■□□□□ 0.32
CHGA-202ENST00000334654 CD1DP15813 335 aa17.07■□□□□ 0.32
CHGA-202ENST00000334654 KRT15P19012 456 aa17.07■□□□□ 0.32
CHGA-202ENST00000334654 CCNFP41002 786 aa17.07■□□□□ 0.32
CHGA-202ENST00000334654 RGS4P49798 205 aa17.07■□□□□ 0.32
CHGA-202ENST00000334654 AASDHQ4L235 1098 aaPredicted RBP17.07■□□□□ 0.32
CHGA-202ENST00000334654 DUS1LQ6P1R4 473 aaKnown RBP17.07■□□□□ 0.32
CHGA-202ENST00000334654 CCDC91Q7Z6B0 441 aa17.07■□□□□ 0.32
CHGA-202ENST00000334654 CROCCP2Q86T23 111 aa17.07■□□□□ 0.32
CHGA-202ENST00000334654 SLC35F3Q8IY50 421 aa17.07■□□□□ 0.32
CHGA-202ENST00000334654 EID2Q8N6I1 236 aa17.07■□□□□ 0.32
CHGA-202ENST00000334654 ACMSDQ8TDX5 336 aa17.07■□□□□ 0.32
CHGA-202ENST00000334654 KCTD4Q8WVF5 259 aa17.07■□□□□ 0.32
CHGA-202ENST00000334654 NXNL1Q96CM4 212 aa17.07■□□□□ 0.32
CHGA-202ENST00000334654 UNKQ9C0B0 810 aaKnown RBP17.07■□□□□ 0.32
CHGA-202ENST00000334654 DERL2Q9GZP9 239 aa17.07■□□□□ 0.32
CHGA-202ENST00000334654 VPS11Q9H270 941 aa17.07■□□□□ 0.32
CHGA-202ENST00000334654 TMBIM4Q9HC24 238 aa17.07■□□□□ 0.32
CHGA-202ENST00000334654 ZNF358Q9NW07 568 aa17.07■□□□□ 0.32
CHGA-202ENST00000334654 SIRPGQ9P1W8 387 aa17.07■□□□□ 0.32
CHGA-202ENST00000334654 TLK1Q9UKI8 766 aa17.07■□□□□ 0.32
CHGA-202ENST00000334654 ADAMTS6Q9UKP5 1117 aa17.07■□□□□ 0.32
CHGA-202ENST00000334654 RP1P56715 2156 aa17.07■□□□□ 0.32
CHGA-202ENST00000334654 A0A087X1B8 175 aa17.06■□□□□ 0.32
CHGA-202ENST00000334654 KIR2DS5A0A0G2JLQ3 304 aa17.06■□□□□ 0.32
CHGA-202ENST00000334654 A0A0G2JNG1 304 aa17.06■□□□□ 0.32
CHGA-202ENST00000334654 PCNX2A6NKB5 2137 aa17.06■□□□□ 0.32
CHGA-202ENST00000334654 OR5K4A6NMS3 321 aa17.06■□□□□ 0.32
CHGA-202ENST00000334654 KIR2DS3K7RE56 304 aa17.06■□□□□ 0.32
CHGA-202ENST00000334654 CDC7O00311 574 aa17.06■□□□□ 0.32
CHGA-202ENST00000334654 RGS16O15492 202 aaPredicted RBP17.06■□□□□ 0.32
CHGA-202ENST00000334654 TPBGLP0DKB5 382 aa17.06■□□□□ 0.32
CHGA-202ENST00000334654 MTHFD1P11586 935 aaKnown RBP17.06■□□□□ 0.32
CHGA-202ENST00000334654 HALP42357 657 aa17.06■□□□□ 0.32
CHGA-202ENST00000334654 MAZP56270 477 aaKnown RBP17.06■□□□□ 0.32
CHGA-202ENST00000334654 SLC18A2Q05940 514 aa17.06■□□□□ 0.32
CHGA-202ENST00000334654 CSHL1Q14406 222 aa17.06■□□□□ 0.32
CHGA-202ENST00000334654 KIR2DS5Q14953 304 aa17.06■□□□□ 0.32
CHGA-202ENST00000334654 LRRC8EQ6NSJ5 796 aa17.06■□□□□ 0.32
CHGA-202ENST00000334654 ARL14Q8N4G2 192 aa17.06■□□□□ 0.32
CHGA-202ENST00000334654 FAM181AQ8N9Y4 354 aa17.06■□□□□ 0.32
CHGA-202ENST00000334654 KYQ8NBH2 561 aa17.06■□□□□ 0.32
CHGA-202ENST00000334654 DUSP23Q9BVJ7 150 aa17.06■□□□□ 0.32
CHGA-202ENST00000334654 COL5A1P20908 1838 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms