RNA–Protein interactions for RNA: ENST00000333235.3

CSPG4P4Y-201, Transcript of CSPG4 pseudogene 4 Y-linked, humanhuman

BASIC

Gene CSPG4P4Y, Length 3,724 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P4Y-201ENST00000333235 VPS51Q9UID3 782 aa11.49□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.49□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 K7EPI3 171 aa11.49□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 OR7A17O14581 309 aa11.49□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 VNN2O95498 520 aa11.49□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 PGRP06401 933 aa11.49□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 ANXA5P08758 320 aa11.49□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 CSKP41240 450 aa11.49□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 STT3AP46977 705 aa11.49□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 HLCSP50747 726 aa11.49□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 MAPK10P53779 464 aa11.49□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 IL1RL1Q01638 556 aa11.49□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 SP3Q02447 781 aa11.49□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 VAC14Q08AM6 782 aa11.49□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 NFATC2Q13469 925 aa11.49□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 SELPLGQ14242 412 aa11.49□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 CXorf57Q6NSI4 855 aaKnown RBP11.49□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 C16orf87Q6PH81 154 aa11.49□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 ZNF783Q6ZMS7 281 aa11.49□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 TMEM26Q6ZUK4 368 aa11.49□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 ADHFE1Q8IWW8 467 aa11.49□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 CLHC1Q8NHS4 586 aa11.49□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 CEP295NLQ96MC4 621 aa11.49□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 TMEM175Q9BSA9 504 aa11.49□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 BOCQ9BWV1 1114 aa11.49□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 CWH43Q9H720 699 aa11.49□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 VAPAQ9P0L0 249 aa11.49□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 DNAJB9Q9UBS3 223 aa11.49□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 LSM7Q9UK45 103 aaKnown RBP11.49□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 TRPM7Q96QT4 1865 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 A0A1W2PQ45 241 aaPredicted RBP11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 A0A1W2PQY0 241 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 C2orf78A6NCI8 922 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 STK16O75716 305 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 PGLSO95336 258 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 HNRNPCP07910 306 aaKnown RBP eCLIP11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 GGT1P19440 569 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 SPANXN4Q5MJ08 99 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 PDPRQ8NCN5 879 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 CD244Q9BZW8 370 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 RNF38Q9H0F5 515 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 P2RY12Q9H244 342 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 RMND5AQ9H871 391 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 RNF186Q9NXI6 227 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 OARD1Q9Y530 152 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 HS6ST1O60243 411 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 F11P03951 625 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 S100A3P33764 101 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 GGT5P36269 586 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 MAPK8P45983 427 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 ARHGDIAP52565 204 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 FAM9CQ8IZT9 166 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 BPIFB1Q8TDL5 484 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 SELENOMQ8WWX9 145 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 ATP13A3Q9H7F0 1226 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 C3orf18Q9UK00 162 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 RSL1D1O76021 490 aaKnown RBP11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 CLDN7O95471 211 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 GLUD1P00367 558 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 CCNA2P20248 432 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 ELK4P28324 431 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 ENTPD1P49961 510 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 TRAF3Q13114 568 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 SLC8B1Q6J4K2 584 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 MAGED4Q96JG8 741 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 FANCEQ9HB96 536 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 IRAK4Q9NWZ3 460 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 C1orf109Q9NX04 203 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 HSFX1Q9UBD0 423 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 PCDHGA11Q9Y5H2 935 aa11.48□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 PATJQ8NI35 1801 aa11.47□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 A0A0J9YVX5 310 aa11.47□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 A0A1W2PPW3 197 aa11.47□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 K7ERQ8 282 aa11.47□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 CXCR6O00574 342 aa11.47□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 SCELO95171 688 aa11.47□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 PRAMEF12O95522 483 aa11.47□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 ZFP36L2P47974 494 aaKnown RBP11.47□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 RAD23AP54725 363 aa11.47□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 PGS1Q32NB8 556 aa11.47□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 ZNF773Q6PK81 442 aa11.47□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 TMEM132CQ8N3T6 1108 aa11.47□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 ZNF461Q8TAF7 563 aa11.47□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 NUDT8Q8WV74 236 aa11.47□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 RBM4BQ9BQ04 359 aaKnown RBP11.47□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 RBM4Q9BWF3 364 aaKnown RBP11.47□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 MTRRQ9UBK8 725 aa11.47□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 LHX3Q9UBR4 397 aa11.47□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 LOC730098B7Z3J9 87 aa11.47□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 ARVCFO00192 962 aa11.47□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 RECQL5O94762 991 aaPredicted RBP11.47□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 CLDN9O95484 217 aa11.47□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 IGSF6O95976 241 aa11.47□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 BCL10O95999 233 aa11.47□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 SERPINA4P29622 427 aa11.47□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 SPAM1P38567 509 aa11.47□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 PHEXP78562 749 aa11.47□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 PHKG1Q16816 387 aa11.47□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 GRAMD4Q6IC98 578 aa11.47□□□□□ -0.57
CSPG4P4Y-201ENST00000333235 TBPL2Q6SJ96 375 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms