RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 LYNP07948 512 aa12.79□□□□□ -0.36
VSTM4-202ENST00000332853 FGF3P11487 239 aaPredicted RBP12.79□□□□□ -0.36
VSTM4-202ENST00000332853 IVDP26440 423 aa12.79□□□□□ -0.36
VSTM4-202ENST00000332853 ASMTP46597 345 aa12.79□□□□□ -0.36
VSTM4-202ENST00000332853 BDKRB1P46663 353 aa12.79□□□□□ -0.36
VSTM4-202ENST00000332853 CCNHP51946 323 aaPredicted RBP12.79□□□□□ -0.36
VSTM4-202ENST00000332853 DGKQP52824 942 aa12.79□□□□□ -0.36
VSTM4-202ENST00000332853 BEND7Q8N7W2 519 aaPredicted RBP12.79□□□□□ -0.36
VSTM4-202ENST00000332853 ZCCHC10Q8TBK6 192 aa12.79□□□□□ -0.36
VSTM4-202ENST00000332853 SLC13A3Q8WWT9 602 aa12.79□□□□□ -0.36
VSTM4-202ENST00000332853 ZNF778Q96MU6 729 aa12.79□□□□□ -0.36
VSTM4-202ENST00000332853 SLC22A14Q9Y267 594 aa12.79□□□□□ -0.36
VSTM4-202ENST00000332853 DDX60LQ5H9U9 1706 aaKnown RBP12.79□□□□□ -0.36
VSTM4-202ENST00000332853 HLA-DQA2P01906 255 aa12.79□□□□□ -0.36
VSTM4-202ENST00000332853 STATHP02808 62 aa12.79□□□□□ -0.36
VSTM4-202ENST00000332853 PPIBP23284 216 aaKnown RBP12.79□□□□□ -0.36
VSTM4-202ENST00000332853 MAGEA11P43364 429 aa12.79□□□□□ -0.36
VSTM4-202ENST00000332853 PLA2G16P53816 162 aa12.79□□□□□ -0.36
VSTM4-202ENST00000332853 NUSAP1Q9BXS6 441 aaKnown RBP12.79□□□□□ -0.36
VSTM4-202ENST00000332853 HAS3O00219 553 aa12.79□□□□□ -0.36
VSTM4-202ENST00000332853 AP3D1O14617 1153 aa12.79□□□□□ -0.36
VSTM4-202ENST00000332853 WNT9AO14904 365 aa12.79□□□□□ -0.36
VSTM4-202ENST00000332853 GUCA1AP43080 201 aaPredicted RBP12.79□□□□□ -0.36
VSTM4-202ENST00000332853 ADARP55265 1226 aaKnown RBP12.79□□□□□ -0.36
VSTM4-202ENST00000332853 MED22Q15528 200 aa12.79□□□□□ -0.36
VSTM4-202ENST00000332853 RTP2Q5QGT7 225 aa12.79□□□□□ -0.36
VSTM4-202ENST00000332853 LRRTM3Q86VH5 581 aa12.79□□□□□ -0.36
VSTM4-202ENST00000332853 C12orf66Q96MD2 445 aa12.79□□□□□ -0.36
VSTM4-202ENST00000332853 PRKAB1Q9Y478 270 aa12.79□□□□□ -0.36
VSTM4-202ENST00000332853 DYTNA2CJ06 578 aa12.79□□□□□ -0.36
VSTM4-202ENST00000332853 CXCR6O00574 342 aa12.79□□□□□ -0.36
VSTM4-202ENST00000332853 TPST2O60704 377 aa12.79□□□□□ -0.36
VSTM4-202ENST00000332853 OR6B1O95007 311 aa12.79□□□□□ -0.36
VSTM4-202ENST00000332853 MARCH8Q5T0T0 291 aa12.79□□□□□ -0.36
VSTM4-202ENST00000332853 MACC1Q6ZN28 852 aa12.79□□□□□ -0.36
VSTM4-202ENST00000332853 RAD51AP1Q96B01 352 aa12.79□□□□□ -0.36
VSTM4-202ENST00000332853 SYT11Q9BT88 431 aa12.79□□□□□ -0.36
VSTM4-202ENST00000332853 SEC14L3Q9UDX4 400 aa12.79□□□□□ -0.36
VSTM4-202ENST00000332853 MAGEB17A8MXT2 336 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 TBX10O75333 385 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 MED26O95402 600 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 HLA-EP13747 358 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 TALDO1P37837 337 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 ADGRE1Q14246 886 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 PPP1R3AQ16821 1122 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 LUZP2Q86TE4 346 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 IFNLR1Q8IU57 520 aaPredicted RBP12.78□□□□□ -0.36
VSTM4-202ENST00000332853 TXNDC5Q8NBS9 432 aaKnown RBP12.78□□□□□ -0.36
VSTM4-202ENST00000332853 OR52L1Q8NGH7 329 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 MYDGFQ969H8 173 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 RAB26Q9ULW5 256 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 COQ6Q9Y2Z9 468 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 PNMA8CA0A1B0GUJ8 204 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 TGFB1P01137 390 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 VIPP01282 170 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 PFKMP08237 780 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 POU2F1P14859 743 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 STC1P52823 247 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 UFM1P61960 85 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 ERVK-8P63133 956 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 RSBN1Q5VWQ0 802 aaPredicted RBP12.78□□□□□ -0.36
VSTM4-202ENST00000332853 C17orf99Q6UX52 265 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 GOLGA7Q7Z5G4 137 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 SLC9A6Q92581 669 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 TDP1Q9NUW8 608 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 TOMM20Q15388 145 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 OR4F6Q8NGB9 312 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 C1orf74Q96LT6 269 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 NUAK2Q9H093 628 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 FNIP2Q9P278 1114 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 TSC22D4Q9Y3Q8 395 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 NRAPQ86VF7 1730 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 ZNF487B1APH4 448 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 PSMD11O00231 422 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 PDE9AO76083 593 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 ATP1B2P14415 290 aaPredicted RBP12.78□□□□□ -0.36
VSTM4-202ENST00000332853 NR4A1P22736 598 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 ADSLP30566 484 aaPredicted RBP12.78□□□□□ -0.36
VSTM4-202ENST00000332853 RPS9P46781 194 aaKnown RBP12.78□□□□□ -0.36
VSTM4-202ENST00000332853 STK19P49842 368 aaPredicted RBP12.78□□□□□ -0.36
VSTM4-202ENST00000332853 CEP78Q5JTW2 689 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 ZNF57Q68EA5 555 aaPredicted RBP12.78□□□□□ -0.36
VSTM4-202ENST00000332853 SLC2A7Q6PXP3 512 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 ERVW-1Q9UQF0 538 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 TESMINQ9Y4I5 508 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 ACTL7AQ9Y615 435 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 ZBTB42B2RXF5 422 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 CHURC1-FNTBB4DL54 471 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 KLF11O14901 512 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 DLDP09622 509 aaKnown RBP12.78□□□□□ -0.36
VSTM4-202ENST00000332853 CYBAP13498 195 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 KLHL12Q53G59 568 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 CEP97Q8IW35 865 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 ARFGAP1Q8N6T3 406 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 SEZ6LQ9BYH1 1024 aa12.78□□□□□ -0.36
VSTM4-202ENST00000332853 FAM234BA2RU67 622 aa12.77□□□□□ -0.36
VSTM4-202ENST00000332853 BCKDKO14874 412 aa12.77□□□□□ -0.36
VSTM4-202ENST00000332853 UGT2B17O75795 530 aa12.77□□□□□ -0.36
VSTM4-202ENST00000332853 THRBP10828 461 aa12.77□□□□□ -0.36
VSTM4-202ENST00000332853 RPL4P36578 427 aaKnown RBP12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms