RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 E5RI56 91 aa9.32□□□□□ -0.92
C11orf54-201ENST00000331239 SLC31A1O15431 190 aa9.32□□□□□ -0.92
C11orf54-201ENST00000331239 YKT6O15498 198 aa9.32□□□□□ -0.92
C11orf54-201ENST00000331239 CIB2O75838 187 aa9.32□□□□□ -0.92
C11orf54-201ENST00000331239 SMNDC1O75940 238 aaKnown RBP eCLIP9.32□□□□□ -0.92
C11orf54-201ENST00000331239 PROCP04070 461 aa9.32□□□□□ -0.92
C11orf54-201ENST00000331239 SP9P0CG40 484 aa9.32□□□□□ -0.92
C11orf54-201ENST00000331239 CD38P28907 300 aa9.32□□□□□ -0.92
C11orf54-201ENST00000331239 FMO4P31512 558 aa9.32□□□□□ -0.92
C11orf54-201ENST00000331239 CDKN1CP49918 316 aaPredicted RBP9.32□□□□□ -0.92
C11orf54-201ENST00000331239 THOP1P52888 689 aa9.32□□□□□ -0.92
C11orf54-201ENST00000331239 PRKAA2P54646 552 aa9.32□□□□□ -0.92
C11orf54-201ENST00000331239 SLC34A1Q06495 639 aa9.32□□□□□ -0.92
C11orf54-201ENST00000331239 SP140Q13342 867 aa9.32□□□□□ -0.92
C11orf54-201ENST00000331239 SMAD1Q15797 465 aaKnown RBP9.32□□□□□ -0.92
C11orf54-201ENST00000331239 CCDC153Q494R4 210 aa9.32□□□□□ -0.92
C11orf54-201ENST00000331239 ZNF658BQ4V348 819 aaPredicted RBP9.32□□□□□ -0.92
C11orf54-201ENST00000331239 METTL2BQ6P1Q9 378 aaKnown RBP9.32□□□□□ -0.92
C11orf54-201ENST00000331239 CACUL1Q86Y37 369 aa9.32□□□□□ -0.92
C11orf54-201ENST00000331239 RASGEF1AQ8N9B8 481 aa9.32□□□□□ -0.92
C11orf54-201ENST00000331239 AVL9Q8NBF6 648 aa9.32□□□□□ -0.92
C11orf54-201ENST00000331239 PLA2G15Q8NCC3 412 aa9.32□□□□□ -0.92
C11orf54-201ENST00000331239 OR56A4Q8NGH8 313 aa9.32□□□□□ -0.92
C11orf54-201ENST00000331239 FBXO27Q8NI29 283 aa9.32□□□□□ -0.92
C11orf54-201ENST00000331239 RHEBL1Q8TAI7 183 aa9.32□□□□□ -0.92
C11orf54-201ENST00000331239 TPSD1Q9BZJ3 242 aa9.32□□□□□ -0.92
C11orf54-201ENST00000331239 ZDHHC5Q9C0B5 715 aa9.32□□□□□ -0.92
C11orf54-201ENST00000331239 STX18Q9P2W9 335 aaKnown RBP9.32□□□□□ -0.92
C11orf54-201ENST00000331239 ATXN10Q9UBB4 475 aa9.32□□□□□ -0.92
C11orf54-201ENST00000331239 SLC39A10Q9ULF5 831 aa9.32□□□□□ -0.92
C11orf54-201ENST00000331239 PCDHGA5Q9Y5G8 931 aa9.32□□□□□ -0.92
C11orf54-201ENST00000331239 A0A0U1RQS6 177 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 SPTY2D1-AS1A0A0U1RR47 76 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 A0A1B0GTW7 788 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 K7ESM1 405 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 RAD51BO15315 384 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 ITM2AO43736 263 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 SGTAO43765 313 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 GPC4O75487 556 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 LYPLA1O75608 230 aaPredicted RBP9.31□□□□□ -0.92
C11orf54-201ENST00000331239 KLHL2O95198 593 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 CEACAM5P06731 702 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 ENO2P09104 434 aaPredicted RBP9.31□□□□□ -0.92
C11orf54-201ENST00000331239 RBP1P09455 135 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 GRK2P25098 689 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 SLC1A6P48664 564 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 AFF3P51826 1226 aaKnown RBP9.31□□□□□ -0.92
C11orf54-201ENST00000331239 TAS2R39P59534 338 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 IL2P60568 153 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 ARHGAP8P85298 464 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 PDAP1Q13442 181 aaKnown RBP9.31□□□□□ -0.92
C11orf54-201ENST00000331239 UBAP2LQ14157 1087 aaKnown RBP9.31□□□□□ -0.92
C11orf54-201ENST00000331239 ACAP2Q15057 778 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 TRMT5Q32P41 509 aaKnown RBP9.31□□□□□ -0.92
C11orf54-201ENST00000331239 C6orf163Q5TEZ5 329 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 KLC3Q6P597 504 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 TMEM220Q6QAJ8 160 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 LRRC74BQ6ZQY2 392 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 NET1Q7Z628 596 aaPredicted RBP9.31□□□□□ -0.92
C11orf54-201ENST00000331239 ZBTB2Q8N680 514 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 FBXO15Q8NCQ5 510 aaPredicted RBP9.31□□□□□ -0.92
C11orf54-201ENST00000331239 PPP4R1Q8TF05 950 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 TFB2MQ9H5Q4 396 aaKnown RBP9.31□□□□□ -0.92
C11orf54-201ENST00000331239 IL1RAPL1Q9NZN1 696 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 CRYL1Q9Y2S2 319 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 BDP1A6H8Y1 2624 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 PRR19A6NJB7 356 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 GRID2O43424 1007 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 OR1I1O60431 355 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 SNUPNO95149 360 aaKnown RBP9.31□□□□□ -0.92
C11orf54-201ENST00000331239 RASGRP1O95267 797 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 C2P06681 752 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 LTA4HP09960 611 aaKnown RBP9.31□□□□□ -0.92
C11orf54-201ENST00000331239 SLC2A4P14672 509 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 CHRM3P20309 590 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 MXRA7P84157 204 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 TIAL1Q01085 375 aaKnown RBP eCLIP9.31□□□□□ -0.92
C11orf54-201ENST00000331239 TUBB3Q13509 450 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 ZRSR2Q15696 482 aaKnown RBP9.31□□□□□ -0.92
C11orf54-201ENST00000331239 PLK5Q496M5 336 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 ZNF789Q5FWF6 425 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 TMEM31Q5JXX7 168 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 LYSMD4Q5XG99 296 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 Q6ZSR6 202 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 SCUBE1Q8IWY4 988 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 ULK2Q8IYT8 1036 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 ZFPM2Q8WW38 1151 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 OR2AG1Q9H205 316 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 COPG2Q9UBF2 871 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 PCOLCE2Q9UKZ9 415 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 MED16Q9Y2X0 877 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.31□□□□□ -0.92
C11orf54-201ENST00000331239 CACNA1IQ9P0X4 2223 aa9.31□□□□□ -0.92
C11orf54-201ENST00000331239 A0A096LPK6 155 aa9.3□□□□□ -0.92
C11orf54-201ENST00000331239 SLC5A10A0PJK1 596 aa9.3□□□□□ -0.92
C11orf54-201ENST00000331239 TNFP01375 233 aa9.3□□□□□ -0.92
C11orf54-201ENST00000331239 C8GP07360 202 aa9.3□□□□□ -0.92
C11orf54-201ENST00000331239 SLC35E2BP0CK96 405 aa9.3□□□□□ -0.92
C11orf54-201ENST00000331239 ZNF37AP17032 561 aaPredicted RBP9.3□□□□□ -0.92
C11orf54-201ENST00000331239 ZNF8P17098 575 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms