RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 EBF2Q9HAK2 575 aa16.6■□□□□ 0.25
DDX41-201ENST00000330503 ANGPTL3Q9Y5C1 460 aa16.6■□□□□ 0.25
DDX41-201ENST00000330503 STON1Q9Y6Q2 735 aa16.6■□□□□ 0.25
DDX41-201ENST00000330503 APODP05090 189 aa16.59■□□□□ 0.25
DDX41-201ENST00000330503 ARL1P40616 181 aaPredicted RBP16.59■□□□□ 0.25
DDX41-201ENST00000330503 PRLHRP49683 370 aa16.59■□□□□ 0.25
DDX41-201ENST00000330503 ENPP2Q13822 863 aa16.59■□□□□ 0.25
DDX41-201ENST00000330503 ABRAXAS2Q15018 415 aa16.59■□□□□ 0.25
DDX41-201ENST00000330503 ZNF423Q2M1K9 1284 aa16.59■□□□□ 0.25
DDX41-201ENST00000330503 ZNF658BQ4V348 819 aaPredicted RBP16.59■□□□□ 0.25
DDX41-201ENST00000330503 PIGGQ5H8A4 983 aa16.59■□□□□ 0.25
DDX41-201ENST00000330503 C6orf136Q5SQH8 315 aa16.59■□□□□ 0.25
DDX41-201ENST00000330503 DSG4Q86SJ6 1040 aa16.59■□□□□ 0.25
DDX41-201ENST00000330503 NUS1Q96E22 293 aa16.59■□□□□ 0.25
DDX41-201ENST00000330503 CCM2Q9BSQ5 444 aa16.59■□□□□ 0.25
DDX41-201ENST00000330503 DYRK4Q9NR20 520 aa16.59■□□□□ 0.25
DDX41-201ENST00000330503 NOP53Q9NZM5 478 aaKnown RBP16.59■□□□□ 0.25
DDX41-201ENST00000330503 RNF11Q9Y3C5 154 aa16.59■□□□□ 0.25
DDX41-201ENST00000330503 FADS3Q9Y5Q0 445 aa16.59■□□□□ 0.25
DDX41-201ENST00000330503 DENND4AQ7Z401 1863 aa16.59■□□□□ 0.25
DDX41-201ENST00000330503 SLC5A10A0PJK1 596 aa16.58■□□□□ 0.25
DDX41-201ENST00000330503 KRT87PA6NCN2 255 aa16.58■□□□□ 0.25
DDX41-201ENST00000330503 LOC730098B7Z3J9 87 aa16.58■□□□□ 0.25
DDX41-201ENST00000330503 QSOX1O00391 747 aa16.58■□□□□ 0.25
DDX41-201ENST00000330503 LZTS3O60299 673 aaPredicted RBP16.58■□□□□ 0.25
DDX41-201ENST00000330503 NRP2O60462 931 aa16.58■□□□□ 0.25
DDX41-201ENST00000330503 MATN4O95460 622 aa16.58■□□□□ 0.25
DDX41-201ENST00000330503 MRPL19P49406 292 aaKnown RBP16.58■□□□□ 0.25
DDX41-201ENST00000330503 GALK1P51570 392 aa16.58■□□□□ 0.25
DDX41-201ENST00000330503 DPTQ07507 201 aa16.58■□□□□ 0.25
DDX41-201ENST00000330503 CEACAM7Q14002 265 aa16.58■□□□□ 0.25
DDX41-201ENST00000330503 PIP5KL1Q5T9C9 394 aa16.58■□□□□ 0.25
DDX41-201ENST00000330503 WLSQ5T9L3 541 aa16.58■□□□□ 0.25
DDX41-201ENST00000330503 IL27RAQ6UWB1 636 aa16.58■□□□□ 0.25
DDX41-201ENST00000330503 BNC2Q6ZN30 1099 aaPredicted RBP16.58■□□□□ 0.25
DDX41-201ENST00000330503 TRIM74Q86UV6 250 aa16.58■□□□□ 0.25
DDX41-201ENST00000330503 KCNV2Q8TDN2 545 aa16.58■□□□□ 0.25
DDX41-201ENST00000330503 STMN2Q93045 179 aa16.58■□□□□ 0.25
DDX41-201ENST00000330503 CCDC124Q96CT7 223 aaKnown RBP16.58■□□□□ 0.25
DDX41-201ENST00000330503 SLC45A3Q96JT2 553 aa16.58■□□□□ 0.25
DDX41-201ENST00000330503 TRIM54Q9BYV2 358 aa16.58■□□□□ 0.25
DDX41-201ENST00000330503 SLC52A3Q9NQ40 469 aa16.58■□□□□ 0.25
DDX41-201ENST00000330503 PFDN4Q9NQP4 134 aa16.58■□□□□ 0.25
DDX41-201ENST00000330503 AIG1Q9NVV5 245 aa16.58■□□□□ 0.25
DDX41-201ENST00000330503 NDE1Q9NXR1 346 aa16.58■□□□□ 0.25
DDX41-201ENST00000330503 FAM8A1Q9UBU6 413 aa16.58■□□□□ 0.25
DDX41-201ENST00000330503 CCL27Q9Y4X3 112 aa16.58■□□□□ 0.25
DDX41-201ENST00000330503 PCDHGA7Q9Y5G6 932 aa16.58■□□□□ 0.25
DDX41-201ENST00000330503 C1QTNF3-AMACRE9PGA6 284 aa16.58■□□□□ 0.24
DDX41-201ENST00000330503 LILRB5O75023 590 aa16.58■□□□□ 0.24
DDX41-201ENST00000330503 ATG13O75143 517 aa16.58■□□□□ 0.24
DDX41-201ENST00000330503 IDO1P14902 403 aa16.58■□□□□ 0.24
DDX41-201ENST00000330503 EPB42P16452 691 aa16.58■□□□□ 0.24
DDX41-201ENST00000330503 SLC6A12P48065 614 aa16.58■□□□□ 0.24
DDX41-201ENST00000330503 PSME3P61289 254 aa16.58■□□□□ 0.24
DDX41-201ENST00000330503 ABRQ12979 859 aa16.58■□□□□ 0.24
DDX41-201ENST00000330503 SP140Q13342 867 aa16.58■□□□□ 0.24
DDX41-201ENST00000330503 TTC23LQ6PF05 361 aa16.58■□□□□ 0.24
DDX41-201ENST00000330503 ADGRG6Q86SQ4 1221 aa16.58■□□□□ 0.24
DDX41-201ENST00000330503 RETREG3Q86VR2 466 aa16.58■□□□□ 0.24
DDX41-201ENST00000330503 SLC32A1Q9H598 525 aa16.58■□□□□ 0.24
DDX41-201ENST00000330503 RIC8BQ9NVN3 520 aa16.58■□□□□ 0.24
DDX41-201ENST00000330503 STX18Q9P2W9 335 aaKnown RBP16.58■□□□□ 0.24
DDX41-201ENST00000330503 GULP1Q9UBP9 304 aa16.58■□□□□ 0.24
DDX41-201ENST00000330503 DRD3P35462 400 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 LTBRP36941 435 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 ZFP36L2P47974 494 aaKnown RBP16.57■□□□□ 0.24
DDX41-201ENST00000330503 PREPP48147 710 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 PIK3CGP48736 1102 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 THOP1P52888 689 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 ERVK-8P63133 956 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 MMEL1Q495T6 779 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 C2orf27AQ580R0 203 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 C8orf82Q6P1X6 216 aaPredicted RBP16.57■□□□□ 0.24
DDX41-201ENST00000330503 TCAIMQ8N3R3 496 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 EZH1Q92800 747 aaPredicted RBP16.57■□□□□ 0.24
DDX41-201ENST00000330503 FOXJ1Q92949 421 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 ABHD8Q96I13 439 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 TEX37Q96LM6 180 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 RIPOR3Q96MK2 946 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 HBEGFQ99075 208 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 EPHX3Q9H6B9 360 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 C9JVG2 144 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 K7EQS6 105 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 MRASO14807 208 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 PSIP1O75475 530 aaKnown RBP16.57■□□□□ 0.24
DDX41-201ENST00000330503 HIST1H2AGP0C0S8 130 aaPredicted RBP16.57■□□□□ 0.24
DDX41-201ENST00000330503 EBLN1P0CF75 366 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 HIST1H2ADP20671 130 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 CYP2A7P20853 494 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 HMOX2P30519 316 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 GCKP35557 465 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 GPR1P46091 355 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 RAET1GQ6H3X3 334 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 BLOC1S3Q6QNY0 202 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 XKR5Q6UX68 686 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 CHCHD4Q8N4Q1 142 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 AADATQ8N5Z0 425 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 MCOLN3Q8TDD5 553 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 RAB7BQ96AH8 199 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms