RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 SERPINI1Q99574 410 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 HIST1H2AJQ99878 128 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 CCM2Q9BSQ5 444 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 H2AFJQ9BTM1 129 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 STON1Q9Y6Q2 735 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 TMEM202A6NGA9 273 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 ARNTLO00327 626 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 FBP2O00757 339 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 EPB42P16452 691 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 CNTN1Q12860 1018 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 RPS6KA2Q15349 733 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 MMEL1Q495T6 779 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 SYTL3Q4VX76 610 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 TMEM220Q6QAJ8 160 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 IL27RAQ6UWB1 636 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 MYLK4Q86YV6 388 aaPredicted RBP14.62□□□□□ -0.07
TPM3-205ENST00000328159 RASGRP3Q8IV61 690 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 CDRT15Q96T59 188 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 NTMT1Q9BV86 223 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 SDR39U1Q9NRG7 319 aaPredicted RBP14.62□□□□□ -0.07
TPM3-205ENST00000328159 AIG1Q9NVV5 245 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 FAM8A1Q9UBU6 413 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 POMPQ9Y244 141 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 GPR45Q9Y5Y3 372 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 K7ESM1 405 aa14.61□□□□□ -0.07
TPM3-205ENST00000328159 CFLARO15519 480 aa14.61□□□□□ -0.07
TPM3-205ENST00000328159 MATN4O95460 622 aa14.61□□□□□ -0.07
TPM3-205ENST00000328159 GNAZP19086 355 aa14.61□□□□□ -0.07
TPM3-205ENST00000328159 WASP42768 502 aa14.61□□□□□ -0.07
TPM3-205ENST00000328159 MTHFRP42898 656 aa14.61□□□□□ -0.07
TPM3-205ENST00000328159 GPR1P46091 355 aa14.61□□□□□ -0.07
TPM3-205ENST00000328159 SOX9P48436 509 aa14.61□□□□□ -0.07
TPM3-205ENST00000328159 MRPL19P49406 292 aaKnown RBP14.61□□□□□ -0.07
TPM3-205ENST00000328159 HNMTP50135 292 aa14.61□□□□□ -0.07
TPM3-205ENST00000328159 DIO3P55073 304 aa14.61□□□□□ -0.07
TPM3-205ENST00000328159 NME5P56597 212 aa14.61□□□□□ -0.07
TPM3-205ENST00000328159 DPTQ07507 201 aa14.61□□□□□ -0.07
TPM3-205ENST00000328159 ENPP2Q13822 863 aa14.61□□□□□ -0.07
TPM3-205ENST00000328159 LRP8Q14114 963 aa14.61□□□□□ -0.07
TPM3-205ENST00000328159 CCDC6Q16204 474 aa14.61□□□□□ -0.07
TPM3-205ENST00000328159 C6orf136Q5SQH8 315 aa14.61□□□□□ -0.07
TPM3-205ENST00000328159 RAET1GQ6H3X3 334 aa14.61□□□□□ -0.07
TPM3-205ENST00000328159 Q6ZSR9 355 aa14.61□□□□□ -0.07
TPM3-205ENST00000328159 LRRC70Q7Z2Q7 622 aa14.61□□□□□ -0.07
TPM3-205ENST00000328159 NLRP8Q86W28 1048 aa14.61□□□□□ -0.07
TPM3-205ENST00000328159 MCOLN3Q8TDD5 553 aa14.61□□□□□ -0.07
TPM3-205ENST00000328159 CXorf40AQ8TE69 158 aa14.61□□□□□ -0.07
TPM3-205ENST00000328159 GLMNQ92990 594 aa14.61□□□□□ -0.07
TPM3-205ENST00000328159 TMEM159Q96B96 161 aa14.61□□□□□ -0.07
TPM3-205ENST00000328159 CCDC124Q96CT7 223 aaKnown RBP14.61□□□□□ -0.07
TPM3-205ENST00000328159 ABHD8Q96I13 439 aa14.61□□□□□ -0.07
TPM3-205ENST00000328159 SLC32A1Q9H598 525 aa14.61□□□□□ -0.07
TPM3-205ENST00000328159 EPHX3Q9H6B9 360 aa14.61□□□□□ -0.07
TPM3-205ENST00000328159 TRPS1Q9UHF7 1281 aa14.61□□□□□ -0.07
TPM3-205ENST00000328159 FADS3Q9Y5Q0 445 aa14.61□□□□□ -0.07
TPM3-205ENST00000328159 CKAP5Q14008 2032 aa14.61□□□□□ -0.07
TPM3-205ENST00000328159 ZFC3H1O60293 1989 aaKnown RBP14.61□□□□□ -0.07
TPM3-205ENST00000328159 TICRRQ7Z2Z1 1910 aa14.61□□□□□ -0.07
TPM3-205ENST00000328159 RANBP2P49792 3224 aaKnown RBP14.61□□□□□ -0.07
TPM3-205ENST00000328159 SLC5A10A0PJK1 596 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 CCDC85CA6NKD9 419 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 NR5A2O00482 541 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 MRASO14807 208 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 NRP2O60462 931 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 ANP32DO95626 131 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 GSTM1P09488 218 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 EBLN1P0CF75 366 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 AP1S2P56377 157 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 ERVK-8P63133 956 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 GSTM4Q03013 218 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 BCL7AQ4VC05 210 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 ATP6AP1LQ52LC2 224 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 PIP5KL1Q5T9C9 394 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 EP400NLQ6ZTU2 488 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 CHPFQ8IZ52 775 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 P2RY13Q9BPV8 354 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 ZCCHC2Q9C0B9 1178 aaKnown RBP14.6□□□□□ -0.07
TPM3-205ENST00000328159 EBF2Q9HAK2 575 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 RNF11Q9Y3C5 154 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 CDH23Q9H251 3354 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 BBIP1A8MTZ0 92 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 LOC730098B7Z3J9 87 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 WDR47O94967 919 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 DPP6P42658 865 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 SLC6A12P48065 614 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 PREPP48147 710 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 GALK1P51570 392 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 PSME3P61289 254 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 ABRQ12979 859 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 GRIK2Q13002 908 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 CCNIQ14094 377 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 ABRAXAS2Q15018 415 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 ZXDCQ2QGD7 858 aaPredicted RBP14.6□□□□□ -0.07
TPM3-205ENST00000328159 PIGGQ5H8A4 983 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 HACD2Q6Y1H2 254 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 MTSS1LQ765P7 747 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 ADGRG6Q86SQ4 1221 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 TRIM74Q86UV6 250 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 SFRP1Q8N474 314 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 RSPH9Q9H1X1 276 aaPredicted RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms