RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 TWNKQ96RR1 684 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 RBPJLQ9UBG7 517 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 A8MT66 165 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 ARHGEF33A8MVX0 844 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 DNAJB1P25685 340 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 EEFSECP57772 596 aaKnown RBP10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 TCEAL1Q15170 157 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 PTGES3Q15185 160 aaKnown RBP10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 MSS51Q4VC12 460 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 ZNF697Q5TEC3 545 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 LCN1P1Q5VSP4 162 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 FUBP3Q96I24 572 aaKnown RBP eCLIP10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 KERAO60938 352 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 NT5EP21589 574 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 ALDH4A1P30038 563 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 SLC18A2Q05940 514 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 RBM48Q5RL73 367 aaKnown RBP10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 OLFML1Q6UWY5 402 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 SLC9A6Q92581 669 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 ESAMQ96AP7 390 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 TMEM209Q96SK2 561 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 KCNS3Q9BQ31 491 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 PCBD2Q9H0N5 130 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 PCDHAC1Q9H158 963 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 PIGUQ9H490 435 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 ZDHHC2Q9UIJ5 367 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 RUVBL1Q9Y265 456 aaKnown RBP10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 TEX264Q9Y6I9 313 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 K7EPI3 171 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 GADD45GO95257 159 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 NRLP54845 237 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 RHAGQ02094 409 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 PAFAH1B3Q15102 231 aaKnown RBP10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 TCEAL5Q5H9L2 206 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 TMEM214Q6NUQ4 689 aaKnown RBP10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 UTS2BQ765I0 119 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 RAB43Q86YS6 212 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 CRYBG2Q8N1P7 616 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 C8orf48Q96LL4 319 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 HBEGFQ99075 208 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 LRRC3Q9BY71 257 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 C1orf21Q9H246 121 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 NECTIN3Q9NQS3 549 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 GPN3Q9UHW5 284 aaPredicted RBP10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 FAM92AA1XBS5 289 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 PDPK1O15530 556 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 TOP3BO95985 862 aaKnown RBP10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 EPHX1P07099 455 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 SAGP10523 405 aaPredicted RBP10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 CCNFP41002 786 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 ATP13A5Q4VNC0 1218 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 SLC25A24Q6NUK1 477 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 KLHL35Q6PF15 583 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 SRFBP1Q8NEF9 429 aaKnown RBP10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 IPCEF1Q8WWN9 437 aaPredicted RBP10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 BCL2L14Q9BZR8 327 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 AKTIPQ9H8T0 292 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 MRM3Q9HC36 420 aaKnown RBP10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 CALML5Q9NZT1 146 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 FNIP2Q9P278 1114 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 NKX1-2Q9UD57 310 aaPredicted RBP10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 FBXW2Q9UKT8 454 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 AQP12BA6NM10 295 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 SLC30A4O14863 429 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 SCN2BO60939 215 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 H6PDO95479 791 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 RPLP0P05388 317 aaKnown RBP10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 PTPN2P17706 415 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 FAUP35544 74 aaKnown RBP10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 ZBTB6Q15916 424 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 TIFABQ6ZNK6 161 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 AQP12AQ8IXF9 295 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 SLC38A4Q969I6 547 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 SLC35G5Q96KT7 338 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 NRXN3Q9Y4C0 1643 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 GLTPD2A6NH11 291 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 RIIAD1A6NNX1 92 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 MERTKQ12866 999 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 NDUFA9Q16795 377 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 CARD16Q5EG05 197 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 MSANTD2Q6P1R3 559 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 TMC8Q8IU68 726 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 ABCB9Q9NP78 766 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 SLC7A8Q9UHI5 535 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 PEX16Q9Y5Y5 336 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 ARPC2O15144 300 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 RNASEH2AO75792 299 aaKnown RBP10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 PSMA1P25786 263 aaKnown RBP10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 KLF1Q13351 362 aaPredicted RBP10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 SH3D19Q5HYK7 790 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 CD99L2Q8TCZ2 262 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 LRRC58Q96CX6 371 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 DIRAS2Q96HU8 199 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 CHCHD6Q9BRQ6 235 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 DUSP26Q9BV47 211 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 GPN1Q9HCN4 374 aaPredicted RBP10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 GPC6Q9Y625 555 aaPredicted RBP10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 PPEF2O14830 753 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 KRT33AO76009 404 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 FAM163BP0C2L3 166 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms