RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 DUX4L4P0CJ87 422 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 DUX4L5P0CJ88 424 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 DUX4L6P0CJ89 424 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 DUX4L7P0CJ90 424 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 SELPP16109 830 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 MMP8P22894 467 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 FCHO2Q0JRZ9 810 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 RIN1Q13671 783 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 ADRM1Q16186 407 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 MSS51Q4VC12 460 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 ZNF627Q7L945 461 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 MIPEPQ99797 713 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 DTLQ9NZJ0 730 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 DUX4Q9UBX2 424 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 RPS6KA6Q9UK32 745 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 FZD10Q9ULW2 581 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 HAT1O14929 419 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 TNFSF12O43508 249 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 FABP3P05413 133 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 HLA-DQB2P05538 268 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 MRPL3P09001 348 aaKnown RBP8.7□□□□□ -1.02
SSBP2-201ENST00000320672 GRPRP30550 384 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 UQCRC1P31930 480 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 IGFALSP35858 605 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 CDK9P50750 372 aaKnown RBP8.7□□□□□ -1.02
SSBP2-201ENST00000320672 RTP1P59025 263 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 RPS3AP61247 264 aaKnown RBP8.7□□□□□ -1.02
SSBP2-201ENST00000320672 CHRNA6Q15825 494 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 INTS11Q5TA45 600 aaKnown RBP8.7□□□□□ -1.02
SSBP2-201ENST00000320672 CYP2U1Q7Z449 544 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 GRASPQ7Z6J2 395 aaPredicted RBP8.7□□□□□ -1.02
SSBP2-201ENST00000320672 LRRC10BA6NIK2 292 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 KCNA5P22460 613 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 PTGIRP43119 386 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 OAZ1P54368 228 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 RGS8P57771 180 aaPredicted RBP8.7□□□□□ -1.02
SSBP2-201ENST00000320672 SMU1Q2TAY7 513 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 IER5LQ5T953 404 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 NEK5Q6P3R8 708 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 LINGO2Q7L985 606 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 LYSMD3Q7Z3D4 306 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 OR51B5Q9H339 312 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 SH3BGRL2Q9UJC5 107 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 QSOX1O00391 747 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 INSIG1O15503 277 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 PPM1AP35813 382 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 UGT8Q16880 541 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 COLEC12Q5KU26 742 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 TSTD2Q5T7W7 516 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 MEX3DQ86XN8 651 aaKnown RBP8.7□□□□□ -1.02
SSBP2-201ENST00000320672 ZZZ3Q8IYH5 903 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 SLC45A3Q96JT2 553 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 TMED9Q9BVK6 235 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 C1QTNF7Q9BXJ2 289 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 MYEF2Q9P2K5 600 aaKnown RBP8.7□□□□□ -1.02
SSBP2-201ENST00000320672 DLC1Q96QB1 1528 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 SERPINA3P01011 423 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 ZNF806P0C7X5 589 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 LAMP2P13473 410 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 DNASE1L1P49184 302 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 ARF3P61204 181 aaPredicted RBP8.7□□□□□ -1.02
SSBP2-201ENST00000320672 ARF1P84077 181 aaKnown RBP8.7□□□□□ -1.02
SSBP2-201ENST00000320672 TARDBPQ13148 414 aaKnown RBP eCLIP8.7□□□□□ -1.022e-6■■□□□ 12.3
SSBP2-201ENST00000320672 LRRC32Q14392 662 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 FBXL18Q96ME1 805 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 OSBPL7Q9BZF2 842 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 FBRSQ9HAH7 460 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 RBPJLQ9UBG7 517 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 NKX1-2Q9UD57 310 aaPredicted RBP8.7□□□□□ -1.02
SSBP2-201ENST00000320672 SLC22A14Q9Y267 594 aa8.7□□□□□ -1.02
SSBP2-201ENST00000320672 BMP10O95393 424 aa8.69□□□□□ -1.02
SSBP2-201ENST00000320672 NAA20P61599 178 aa8.69□□□□□ -1.02
SSBP2-201ENST00000320672 CREMQ03060 361 aa8.69□□□□□ -1.02
SSBP2-201ENST00000320672 SMAD2Q15796 467 aaKnown RBP8.69□□□□□ -1.02
SSBP2-201ENST00000320672 GCNT6Q5T4J0 391 aa8.69□□□□□ -1.02
SSBP2-201ENST00000320672 CAND1Q86VP6 1230 aaKnown RBP8.69□□□□□ -1.02
SSBP2-201ENST00000320672 PTCD2Q8WV60 388 aaKnown RBP8.69□□□□□ -1.02
SSBP2-201ENST00000320672 FATE1Q969F0 183 aa8.69□□□□□ -1.02
SSBP2-201ENST00000320672 MRPL48Q96GC5 212 aaKnown RBP8.69□□□□□ -1.02
SSBP2-201ENST00000320672 SLC38A3Q99624 504 aa8.69□□□□□ -1.02
SSBP2-201ENST00000320672 SEC61A2Q9H9S3 476 aa8.69□□□□□ -1.02
SSBP2-201ENST00000320672 DNAJC28Q9NX36 388 aa8.69□□□□□ -1.02
SSBP2-201ENST00000320672 LINGO3P0C6S8 592 aa8.69□□□□□ -1.02
SSBP2-201ENST00000320672 RPL9P32969 192 aaKnown RBP8.69□□□□□ -1.02
SSBP2-201ENST00000320672 OSTM1Q86WC4 334 aa8.69□□□□□ -1.02
SSBP2-201ENST00000320672 TOP6BLQ8N6T0 577 aa8.69□□□□□ -1.02
SSBP2-201ENST00000320672 KREMEN2Q8NCW0 462 aa8.69□□□□□ -1.02
SSBP2-201ENST00000320672 ZFP28Q8NHY6 868 aa8.69□□□□□ -1.02
SSBP2-201ENST00000320672 ZNF384Q8TF68 577 aa8.69□□□□□ -1.02
SSBP2-201ENST00000320672 SEC14L1Q92503 715 aa8.69□□□□□ -1.02
SSBP2-201ENST00000320672 PAAF1Q9BRP4 392 aa8.69□□□□□ -1.02
SSBP2-201ENST00000320672 B3GNT4Q9C0J1 378 aa8.69□□□□□ -1.02
SSBP2-201ENST00000320672 SRMSQ9H3Y6 488 aa8.69□□□□□ -1.02
SSBP2-201ENST00000320672 ZNF224Q9NZL3 707 aa8.69□□□□□ -1.02
SSBP2-201ENST00000320672 TAC3Q9UHF0 121 aa8.69□□□□□ -1.02
SSBP2-201ENST00000320672 ZDHHC2Q9UIJ5 367 aa8.69□□□□□ -1.02
SSBP2-201ENST00000320672 GABRQQ9UN88 632 aa8.69□□□□□ -1.02
SSBP2-201ENST00000320672 PGRMC2O15173 223 aa8.69□□□□□ -1.02
SSBP2-201ENST00000320672 PXNP49023 591 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms