RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 CLCN7P51798 805 aa18.77■□□□□ 0.59
RTN4-201ENST00000317610 GTF2H2Q13888 395 aa18.77■□□□□ 0.59
RTN4-201ENST00000317610 RFX4Q33E94 735 aa18.77■□□□□ 0.59
RTN4-201ENST00000317610 RUNDC3AQ59EK9 446 aa18.77■□□□□ 0.59
RTN4-201ENST00000317610 GTF2H2CQ6P1K8 395 aa18.77■□□□□ 0.59
RTN4-201ENST00000317610 TMEM179BQ7Z7N9 219 aa18.77■□□□□ 0.59
RTN4-201ENST00000317610 EID3Q8N140 333 aa18.77■□□□□ 0.59
RTN4-201ENST00000317610 ZCCHC7Q8N3Z6 543 aaKnown RBP18.77■□□□□ 0.59
RTN4-201ENST00000317610 FAR1Q8WVX9 515 aa18.77■□□□□ 0.59
RTN4-201ENST00000317610 PTPN18Q99952 460 aa18.77■□□□□ 0.59
RTN4-201ENST00000317610 SH3GL1Q99961 368 aa18.77■□□□□ 0.59
RTN4-201ENST00000317610 THUMPD3Q9BV44 507 aaKnown RBP18.77■□□□□ 0.59
RTN4-201ENST00000317610 MAGEH1Q9H213 219 aa18.77■□□□□ 0.59
RTN4-201ENST00000317610 TRIT1Q9H3H1 467 aaKnown RBP18.77■□□□□ 0.59
RTN4-201ENST00000317610 DCAF13Q9NV06 445 aaKnown RBP18.77■□□□□ 0.59
RTN4-201ENST00000317610 MTRRQ9UBK8 725 aa18.77■□□□□ 0.59
RTN4-201ENST00000317610 DAPK2Q9UIK4 370 aa18.77■□□□□ 0.59
RTN4-201ENST00000317610 GNGT2O14610 69 aa18.76■□□□□ 0.59
RTN4-201ENST00000317610 OTCP00480 354 aa18.76■□□□□ 0.59
RTN4-201ENST00000317610 ESR1P03372 595 aa18.76■□□□□ 0.59
RTN4-201ENST00000317610 CNPP09543 421 aaKnown RBP18.76■□□□□ 0.59
RTN4-201ENST00000317610 ITGAMP11215 1152 aa18.76■□□□□ 0.59
RTN4-201ENST00000317610 HOXB6P17509 224 aaKnown RBP18.76■□□□□ 0.59
RTN4-201ENST00000317610 HPCAL1P37235 193 aa18.76■□□□□ 0.59
RTN4-201ENST00000317610 RXRGP48443 463 aa18.76■□□□□ 0.59
RTN4-201ENST00000317610 OXCT1P55809 520 aa18.76■□□□□ 0.59
RTN4-201ENST00000317610 PLIN5Q00G26 463 aa18.76■□□□□ 0.59
RTN4-201ENST00000317610 C18orf21Q32NC0 220 aaPredicted RBP18.76■□□□□ 0.59
RTN4-201ENST00000317610 PLA2G4EQ3MJ16 856 aa18.76■□□□□ 0.59
RTN4-201ENST00000317610 C10orf120Q5SQS8 335 aa18.76■□□□□ 0.59
RTN4-201ENST00000317610 DCP2Q8IU60 420 aaKnown RBP18.76■□□□□ 0.59
RTN4-201ENST00000317610 PLPP6Q8IY26 295 aa18.76■□□□□ 0.59
RTN4-201ENST00000317610 MICU2Q8IYU8 434 aa18.76■□□□□ 0.59
RTN4-201ENST00000317610 GLB1L3Q8NCI6 653 aaPredicted RBP18.76■□□□□ 0.59
RTN4-201ENST00000317610 FBXO32Q969P5 355 aa18.76■□□□□ 0.59
RTN4-201ENST00000317610 FAM162AQ96A26 154 aa18.76■□□□□ 0.59
RTN4-201ENST00000317610 PSD2Q9BQI7 771 aa18.76■□□□□ 0.59
RTN4-201ENST00000317610 CINPQ9BW66 212 aaPredicted RBP18.76■□□□□ 0.59
RTN4-201ENST00000317610 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.76■□□□□ 0.59
RTN4-201ENST00000317610 TRBV5-3A0A0A0MS03 114 aa18.75■□□□□ 0.59
RTN4-201ENST00000317610 AXIN1O15169 862 aa18.75■□□□□ 0.59
RTN4-201ENST00000317610 HS6ST1O60243 411 aa18.75■□□□□ 0.59
RTN4-201ENST00000317610 JRKO75564 520 aa18.75■□□□□ 0.59
RTN4-201ENST00000317610 NR4A1P22736 598 aa18.75■□□□□ 0.59
RTN4-201ENST00000317610 CDK5R2Q13319 367 aa18.75■□□□□ 0.59
RTN4-201ENST00000317610 PON2Q15165 354 aa18.75■□□□□ 0.59
RTN4-201ENST00000317610 SBSNQ6UWP8 590 aa18.75■□□□□ 0.59
RTN4-201ENST00000317610 POP5Q969H6 163 aaKnown RBP18.75■□□□□ 0.59
RTN4-201ENST00000317610 SMIM14Q96QK8 99 aa18.75■□□□□ 0.59
RTN4-201ENST00000317610 P2RY12Q9H244 342 aa18.75■□□□□ 0.59
RTN4-201ENST00000317610 TMEM165Q9HC07 324 aa18.75■□□□□ 0.59
RTN4-201ENST00000317610 EIF3LQ9Y262 564 aaKnown RBP18.75■□□□□ 0.59
RTN4-201ENST00000317610 H7C0S8 307 aa18.75■□□□□ 0.59
RTN4-201ENST00000317610 SLC22A1O15245 554 aa18.75■□□□□ 0.59
RTN4-201ENST00000317610 SLC2A4P14672 509 aa18.75■□□□□ 0.59
RTN4-201ENST00000317610 ARL1P40616 181 aaPredicted RBP18.75■□□□□ 0.59
RTN4-201ENST00000317610 PTGER3P43115 390 aa18.75■□□□□ 0.59
RTN4-201ENST00000317610 EMX1Q04741 257 aaPredicted RBP18.75■□□□□ 0.59
RTN4-201ENST00000317610 MAPKAPK3Q16644 382 aa18.75■□□□□ 0.59
RTN4-201ENST00000317610 SPRYD7Q5W111 196 aa18.75■□□□□ 0.59
RTN4-201ENST00000317610 ADAMTSL2Q86TH1 951 aa18.75■□□□□ 0.59
RTN4-201ENST00000317610 HIPK1Q86Z02 1210 aa18.75■□□□□ 0.59
RTN4-201ENST00000317610 CHPFQ8IZ52 775 aa18.75■□□□□ 0.59
RTN4-201ENST00000317610 OR7D4Q8NG98 312 aa18.75■□□□□ 0.59
RTN4-201ENST00000317610 FRS2Q8WU20 508 aa18.75■□□□□ 0.59
RTN4-201ENST00000317610 UBA2Q9UBT2 640 aaPredicted RBP18.75■□□□□ 0.59
RTN4-201ENST00000317610 DHRS7Q9Y394 339 aa18.75■□□□□ 0.59
RTN4-201ENST00000317610 FAM220BPB1ANY3 271 aa18.74■□□□□ 0.59
RTN4-201ENST00000317610 E5RI56 91 aa18.74■□□□□ 0.59
RTN4-201ENST00000317610 B4GALT3O60512 393 aa18.74■□□□□ 0.59
RTN4-201ENST00000317610 IL6P05231 212 aa18.74■□□□□ 0.59
RTN4-201ENST00000317610 RPL38P63173 70 aaKnown RBP18.74■□□□□ 0.59
RTN4-201ENST00000317610 MAD2L1Q13257 205 aaPredicted RBP18.74■□□□□ 0.59
RTN4-201ENST00000317610 MTA1Q13330 715 aa18.74■□□□□ 0.59
RTN4-201ENST00000317610 PTGR1Q14914 329 aa18.74■□□□□ 0.59
RTN4-201ENST00000317610 FAM174BQ3ZCQ3 159 aa18.74■□□□□ 0.59
RTN4-201ENST00000317610 SLCO6A1Q86UG4 719 aa18.74■□□□□ 0.59
RTN4-201ENST00000317610 ZNF598Q86UK7 904 aaKnown RBP18.74■□□□□ 0.59
RTN4-201ENST00000317610 CALHM3Q86XJ0 350 aa18.74■□□□□ 0.59
RTN4-201ENST00000317610 SLC35B4Q969S0 331 aa18.74■□□□□ 0.59
RTN4-201ENST00000317610 ADAM2Q99965 735 aa18.74■□□□□ 0.59
RTN4-201ENST00000317610 NECTIN3Q9NQS3 549 aa18.74■□□□□ 0.59
RTN4-201ENST00000317610 TLR8Q9NR97 1041 aaKnown RBP18.74■□□□□ 0.59
RTN4-201ENST00000317610 FBXO8Q9NRD0 319 aa18.74■□□□□ 0.59
RTN4-201ENST00000317610 ASIC5Q9NY37 505 aa18.74■□□□□ 0.59
RTN4-201ENST00000317610 PCDHB5Q9Y5E4 795 aa18.74■□□□□ 0.59
RTN4-201ENST00000317610 F5H5T6 163 aa18.74■□□□□ 0.59
RTN4-201ENST00000317610 IGHA2P01877 340 aa18.74■□□□□ 0.59
RTN4-201ENST00000317610 ZRANB3Q5FWF4 1079 aa18.74■□□□□ 0.59
RTN4-201ENST00000317610 ATG9BQ674R7 924 aa18.74■□□□□ 0.59
RTN4-201ENST00000317610 MILR1Q7Z6M3 343 aa18.74■□□□□ 0.59
RTN4-201ENST00000317610 LGI2Q8N0V4 545 aa18.74■□□□□ 0.59
RTN4-201ENST00000317610 MFSD4AQ8N468 514 aa18.74■□□□□ 0.59
RTN4-201ENST00000317610 ARL10Q8N8L6 244 aa18.74■□□□□ 0.59
RTN4-201ENST00000317610 LPCAT1Q8NF37 534 aa18.74■□□□□ 0.59
RTN4-201ENST00000317610 ABHD8Q96I13 439 aa18.74■□□□□ 0.59
RTN4-201ENST00000317610 CLMPQ9H6B4 373 aa18.74■□□□□ 0.59
RTN4-201ENST00000317610 KAT8Q9H7Z6 458 aaKnown RBP18.74■□□□□ 0.59
RTN4-201ENST00000317610 IPPKQ9H8X2 491 aa18.74■□□□□ 0.59
RTN4-201ENST00000317610 CPA4Q9UI42 421 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms