RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 MED21Q13503 144 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 NFYCQ13952 458 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 AP5B1Q2VPB7 878 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 EML3Q32P44 896 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 HENMT1Q5T8I9 393 aaKnown RBP13.65□□□□□ -0.22
VAMP2-201ENST00000316509 LPCAT4Q643R3 524 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 LAYNQ6UX15 382 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 RASGRP3Q8IV61 690 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 NAT16Q8N8M0 369 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 TMIEQ8NEW7 156 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 BTN2A2Q8WVV5 523 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 USP7Q93009 1102 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 CDK15Q96Q40 435 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 EPHX3Q9H6B9 360 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 ARMC1Q9NVT9 282 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 ARL15Q9NXU5 204 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 ACTR3BQ9P1U1 418 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 PDE10AQ9Y233 779 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 AP3M1Q9Y2T2 418 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 CCL27Q9Y4X3 112 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 PCDHA9Q9Y5H5 950 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 HCFC2Q9Y5Z7 792 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 C16orf96A6NNT2 1141 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 NPIPB8E9PQR5 432 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 PIM1P11309 404 aaPredicted RBP13.65□□□□□ -0.22
VAMP2-201ENST00000316509 SLC6A2P23975 617 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 PEX2P28328 305 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 GNPDA1P46926 289 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 ZFP36L2P47974 494 aaKnown RBP13.65□□□□□ -0.22
VAMP2-201ENST00000316509 CCR3P51677 355 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 UFM1P61960 85 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 EIF4HQ15056 248 aaKnown RBP13.65□□□□□ -0.22
VAMP2-201ENST00000316509 NR6A1Q15406 480 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 C18orf21Q32NC0 220 aaPredicted RBP13.65□□□□□ -0.22
VAMP2-201ENST00000316509 AASDHQ4L235 1098 aaPredicted RBP13.65□□□□□ -0.22
VAMP2-201ENST00000316509 HSD11B1LQ7Z5J1 315 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 OR2T34Q8NGX1 318 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 OR2T3Q8NH03 318 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 DNAJB8Q8NHS0 232 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 PROKR1Q8TCW9 393 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 CYB5D2Q8WUJ1 264 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 SMG7Q92540 1137 aaKnown RBP13.65□□□□□ -0.22
VAMP2-201ENST00000316509 ZBTB18Q99592 522 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 RAB26Q9ULW5 256 aa13.65□□□□□ -0.22
VAMP2-201ENST00000316509 BRCA2P51587 3418 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 FXYD1O00168 92 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 SLCO2B1O94956 709 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 TCN1P20061 433 aaPredicted RBP13.64□□□□□ -0.23
VAMP2-201ENST00000316509 NME5P56597 212 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 GPM6BQ13491 265 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 INPP5AQ14642 412 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 ABRAXAS2Q15018 415 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 GRAMD1BQ3KR37 738 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 SFT2D3Q587I9 215 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 LCN8Q6JVE9 175 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 RFLNAQ6ZTI6 216 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 CYP2U1Q7Z449 544 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 NLRP8Q86W28 1048 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 PTRH1Q86Y79 214 aaKnown RBP13.64□□□□□ -0.23
VAMP2-201ENST00000316509 TICAM1Q8IUC6 712 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 BPIFB1Q8TDL5 484 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 SNX6Q9UNH7 406 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 LOC730098B7Z3J9 87 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 MANBAO00462 879 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 NME4O00746 187 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 DENRO43583 198 aaKnown RBP13.64□□□□□ -0.23
VAMP2-201ENST00000316509 SMNDC1O75940 238 aaKnown RBP eCLIP13.64□□□□□ -0.23
VAMP2-201ENST00000316509 GSTM1P09488 218 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 UMPSP11172 480 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 BMP1P13497 986 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 ACPPP15309 386 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 PRPH2P23942 346 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 MSX2P35548 267 aaPredicted RBP13.64□□□□□ -0.23
VAMP2-201ENST00000316509 SLC6A12P48065 614 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 ERVK-21P61565 698 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 SEMG2Q02383 582 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 GSTM4Q03013 218 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 RALGDSQ12967 914 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 C6orf10Q5SRN2 563 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 CACHD1Q5VU97 1274 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 IL23RQ5VWK5 629 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 CYP20A1Q6UW02 462 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 SCIMPQ6UWF3 145 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 ZNF765Q7L2R6 523 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 HID1Q8IV36 788 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 ETFBKMTQ8IXQ9 262 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 KLHDC8AQ8IYD2 350 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 TMEM102Q8N9M5 508 aaPredicted RBP13.64□□□□□ -0.23
VAMP2-201ENST00000316509 L3MBTL4Q8NA19 623 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 ITFG1Q8TB96 612 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 ATL1Q8WXF7 558 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 TMEM125Q96AQ2 219 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 LMAN2LQ9H0V9 348 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 PCDHAC1Q9H158 963 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 COPS7BQ9H9Q2 264 aaPredicted RBP13.64□□□□□ -0.23
VAMP2-201ENST00000316509 PDP2Q9P2J9 529 aa13.64□□□□□ -0.23
VAMP2-201ENST00000316509 UGDHO60701 494 aa13.63□□□□□ -0.23
VAMP2-201ENST00000316509 CTSLP07711 333 aa13.63□□□□□ -0.23
VAMP2-201ENST00000316509 MMP12P39900 470 aa13.63□□□□□ -0.23
VAMP2-201ENST00000316509 HTR6P50406 440 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms