RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 SMYD2Q9NRG4 433 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 RGS17Q9UGC6 210 aaPredicted RBP6.55□□□□□ -1.36
ZNF540-201ENST00000316433 ZNF639Q9UID6 485 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 TRHDEQ9UKU6 1024 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 ELF5Q9UKW6 265 aaPredicted RBP6.55□□□□□ -1.36
ZNF540-201ENST00000316433 ENTPD4Q9Y227 616 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 SNX5Q9Y5X3 404 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 NLRC5Q86WI3 1866 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 A0A1B0GTQ1 180 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 TCRBV7S3A2A0A539 114 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 PQLC2LA1A4F0 135 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 KPNA7A9QM74 516 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 TFECO14948 347 aaPredicted RBP6.54□□□□□ -1.36
ZNF540-201ENST00000316433 HS6ST1O60243 411 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 HTR1AP08908 422 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 ZP3P21754 424 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 CSKP41240 450 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 PLIN5Q00G26 463 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 DCAF4L1Q3SXM0 396 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 ZYG11AQ6WRX3 759 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 RHOUQ7L0Q8 258 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 RAB44Q7Z6P3 723 aaPredicted RBP6.54□□□□□ -1.36
ZNF540-201ENST00000316433 TMEM199Q8N511 208 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 YIPF7Q8N8F6 280 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 NAT16Q8N8M0 369 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 ZNF557Q8N988 423 aaPredicted RBP6.54□□□□□ -1.36
ZNF540-201ENST00000316433 ZMIZ2Q8NF64 920 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 ARNTL2Q8WYA1 636 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 COPS5Q92905 334 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 FUBP1Q96AE4 644 aaKnown RBP6.54□□□□□ -1.36
ZNF540-201ENST00000316433 TRMT2BQ96GJ1 504 aaKnown RBP6.54□□□□□ -1.36
ZNF540-201ENST00000316433 EXOC2Q96KP1 924 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 NECTIN4Q96NY8 510 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 SLC2A13Q96QE2 648 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 ZNF300Q96RE9 604 aaPredicted RBP6.54□□□□□ -1.36
ZNF540-201ENST00000316433 RBBP8Q99708 897 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 PELOQ9BRX2 385 aaKnown RBP6.54□□□□□ -1.36
ZNF540-201ENST00000316433 SHARPINQ9H0F6 387 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 UPF3AQ9H1J1 476 aaKnown RBP6.54□□□□□ -1.36
ZNF540-201ENST00000316433 LDAHQ9H6V9 325 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 GSN-AS1Q9NRJ2 163 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 ZNF275Q9NSD4 429 aaPredicted RBP6.54□□□□□ -1.36
ZNF540-201ENST00000316433 RNF146Q9NTX7 359 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 LAMP5Q9UJQ1 280 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 ZFR2Q9UPR6 939 aaKnown RBP6.54□□□□□ -1.36
ZNF540-201ENST00000316433 RAP2CQ9Y3L5 183 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 PCDHGB6Q9Y5F9 930 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 DNAJC25-GNG10A0A024R161 153 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 DBX1A6NMT0 343 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 H0YAE9 185 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 TRIM24O15164 1050 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 CABYRO75952 493 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 MED26O95402 600 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 FTH1P02794 183 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 ALDOAP04075 364 aaKnown RBP6.54□□□□□ -1.36
ZNF540-201ENST00000316433 EDN1P05305 212 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 C2P06681 752 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 TCF4P15884 667 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 ACSL1P33121 698 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 RAB13P51153 203 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 GABARAPL2P60520 117 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 SLC6A3Q01959 620 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 MBTD1Q05BQ5 628 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 CCINQ13939 588 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 STXBP2Q15833 593 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 DUSP6Q16828 381 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 KIF19Q2TAC6 998 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 ZNF699Q32M78 642 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 TPRG1LQ5T0D9 272 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 SLC6A19Q695T7 634 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 TXNRD3NBQ6F5E7 133 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 PYHIN1Q6K0P9 492 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 TIGD7Q6NT04 549 aaPredicted RBP6.54□□□□□ -1.36
ZNF540-201ENST00000316433 ZNF782Q6ZMW2 699 aaPredicted RBP6.54□□□□□ -1.36
ZNF540-201ENST00000316433 SNX20Q7Z614 316 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 ZNF467Q7Z7K2 595 aaPredicted RBP6.54□□□□□ -1.36
ZNF540-201ENST00000316433 P2RY8Q86VZ1 359 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 MPP5Q8N3R9 675 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 TMEM151AQ8N4L1 468 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 PPM1NQ8N819 430 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 ATG16L2Q8NAA4 619 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 CLRN3Q8NCR9 226 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 TRPV3Q8NET8 790 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 RBPMSQ93062 196 aaKnown RBP6.54□□□□□ -1.36
ZNF540-201ENST00000316433 MUS81Q96NY9 551 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 GAD1Q99259 594 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 TRMOQ9BU70 441 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 C1QTNF1Q9BXJ1 281 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 ESRP2Q9H6T0 727 aaKnown RBP6.54□□□□□ -1.36
ZNF540-201ENST00000316433 PRDM9Q9NQV7 894 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 KLHL21Q9UJP4 597 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 ANAPC2Q9UJX6 822 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 OAZ3Q9UMX2 235 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 LIPT1Q9Y234 373 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 CSADQ9Y600 493 aa6.54□□□□□ -1.36
ZNF540-201ENST00000316433 A0A0A6YYJ9 748 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 A0A1W2PRQ8 180 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 PIPSLA2A3N6 862 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 FAM149AA5PLN7 773 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 METTL15A6NJ78 407 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms