RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 ECT2LQ008S8 904 aa16.91■□□□□ 0.3
SCAMP4-201ENST00000316097 PPIGQ13427 754 aaKnown RBP eCLIP16.91■□□□□ 0.35e-11■□□□□ 9.3
SCAMP4-201ENST00000316097 SPATS1Q496A3 300 aa16.91■□□□□ 0.3
SCAMP4-201ENST00000316097 UBE2Q1Q7Z7E8 422 aa16.91■□□□□ 0.3
SCAMP4-201ENST00000316097 LRRC49Q8IUZ0 686 aa16.91■□□□□ 0.3
SCAMP4-201ENST00000316097 OR6P1Q8NGX9 317 aa16.91■□□□□ 0.3
SCAMP4-201ENST00000316097 PLD4Q96BZ4 506 aa16.91■□□□□ 0.3
SCAMP4-201ENST00000316097 NSMCE2Q96MF7 247 aa16.91■□□□□ 0.3
SCAMP4-201ENST00000316097 BAG5Q9UL15 447 aa16.91■□□□□ 0.3
SCAMP4-201ENST00000316097 CRYL1Q9Y2S2 319 aa16.91■□□□□ 0.3
SCAMP4-201ENST00000316097 GPR45Q9Y5Y3 372 aa16.91■□□□□ 0.3
SCAMP4-201ENST00000316097 A0A1B0GTL3 188 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 PRAMEF11O60813 436 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 ALPLP05186 524 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 HTR1AP08908 422 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 IRS1P35568 1242 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 MAPKAPK2P49137 400 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 NFKB2Q00653 900 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 IFITM3Q01628 133 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 IL10RBQ08334 325 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 DNASE1L3Q13609 305 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 MEP1AQ16819 746 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 LILRA6Q6PI73 481 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 CILP2Q8IUL8 1156 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 CARNMT1Q8N4J0 409 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 KREMEN2Q8NCW0 462 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 CLP1Q92989 425 aaKnown RBP16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 CEP295NLQ96MC4 621 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 ZNF641Q96N77 438 aaPredicted RBP16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 SMIM14Q96QK8 99 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 WDR12Q9GZL7 423 aaKnown RBP16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 KLHL25Q9H0H3 589 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 TOR3AQ9H497 397 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 PCDH12Q9NPG4 1184 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 POLR3BQ9NW08 1133 aaPredicted RBP16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 PCDHGA8Q9Y5G5 932 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 REV3LO60673 3130 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 OR51F1A6NGY5 319 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 CCDC154A6NI56 674 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 C16orf96A6NNT2 1141 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 UPK1AO00322 258 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 C1RP00736 705 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 LRG1P02750 347 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 CKMP06732 381 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 CCR2P41597 374 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 CDH4P55283 916 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 PTPRCAPQ14761 206 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 PGS1Q32NB8 556 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 TIGD2Q4W5G0 525 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 FBXO48Q5FWF7 155 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 RNF219Q5W0B1 726 aaPredicted RBP16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 GLYATQ6IB77 296 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 FAM109BQ6ICB4 259 aaPredicted RBP16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 RAB44Q7Z6P3 723 aaPredicted RBP16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 SLCO6A1Q86UG4 719 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 RALGPS2Q86X27 583 aaPredicted RBP16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 WFDC5Q8TCV5 224 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 ZFP90Q8TF47 636 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 STARD8Q92502 1023 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 MCOLN1Q9GZU1 580 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 AKIP1Q9NQ31 210 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 ENPP5Q9UJA9 477 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 KCTD3Q9Y597 815 aa16.9■□□□□ 0.3
SCAMP4-201ENST00000316097 KIAA1671Q9BY89 1806 aa16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 AXIN1O15169 862 aa16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 GREM1O60565 184 aa16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 TBL1XO60907 577 aa16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 DEAF1O75398 565 aaPredicted RBP16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 MZF1P28698 734 aaPredicted RBP16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 EEFSECP57772 596 aaKnown RBP16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 ZNF177Q13360 481 aaPredicted RBP16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 RCAN2Q14206 197 aa16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 ZNF697Q5TEC3 545 aa16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 SLC2A7Q6PXP3 512 aa16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 TTC30BQ8N4P2 665 aa16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 TEX26Q8N6G2 289 aa16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 POF1BQ8WVV4 589 aa16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 HDAC2Q92769 488 aaKnown RBP16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 PDFQ9HBH1 243 aa16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 ATP13A1Q9HD20 1204 aa16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 PDE10AQ9Y233 779 aa16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 TIMM22Q9Y584 194 aa16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 CRCPO75575 148 aa16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 RHOCP08134 193 aa16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 PABPC1P11940 636 aaKnown RBP16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 YBEYP58557 167 aaPredicted RBP16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 UFM1P61960 85 aa16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 ZNF235Q14590 738 aa16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 DPY19L1Q2PZI1 675 aa16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 C5orf22Q49AR2 442 aa16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 TPGS1Q6ZTW0 290 aa16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 RIMKLAQ8IXN7 391 aa16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 SLC7A5P1Q8MH63 180 aa16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 GABPB2Q8TAK5 448 aaPredicted RBP16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 ASB2Q96Q27 587 aa16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 RAD9AQ99638 391 aa16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 PSD2Q9BQI7 771 aa16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 MARCH4Q9P2E8 410 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms