RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 CASP2P42575 452 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 KCNJ10P78508 379 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 BNIP2Q12982 314 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 LCP2Q13094 533 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 CUL3Q13618 768 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 SMAD2Q15796 467 aaKnown RBP7.68□□□□□ -1.18
CNOT4-201ENST00000315544 ADPRMQ3LIE5 342 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 TOR1AIP1Q5JTV8 583 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 CHST9Q7L1S5 443 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 PID1Q7Z2X4 250 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 TSPYL5Q86VY4 417 aaPredicted RBP7.68□□□□□ -1.18
CNOT4-201ENST00000315544 PYCR2Q96C36 320 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 ASIC4Q96FT7 647 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 RHNO1Q9BSD3 238 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 FICDQ9BVA6 458 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 GPR62Q9BZJ7 368 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 TRIT1Q9H3H1 467 aaKnown RBP7.68□□□□□ -1.18
CNOT4-201ENST00000315544 SLC25A19Q9HC21 320 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 THG1LQ9NWX6 298 aaKnown RBP7.68□□□□□ -1.18
CNOT4-201ENST00000315544 DDIT4Q9NX09 232 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 TRPS1Q9UHF7 1281 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 SLC39A10Q9ULF5 831 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 OARD1Q9Y530 152 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 CELSR3Q9NYQ7 3312 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 ANXA9O76027 345 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 FAM58BPP0C7Q3 252 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 PFKLP17858 780 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 GPX2P18283 190 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 SERPINH1P50454 418 aaKnown RBP7.68□□□□□ -1.18
CNOT4-201ENST00000315544 TPI1P60174 286 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 POU6F1Q14863 301 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 FAM171A1Q5VUB5 890 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 ZNF470Q6ECI4 717 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 TXNDC11Q6PKC3 985 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 PAQR3Q6TCH7 311 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 FKBP9P1Q75LS8 142 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 LDB1Q86U70 411 aaPredicted RBP7.68□□□□□ -1.18
CNOT4-201ENST00000315544 MON1AQ86VX9 555 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 SLC22A9Q8IVM8 553 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 ZNF513Q8N8E2 541 aaPredicted RBP7.68□□□□□ -1.18
CNOT4-201ENST00000315544 USP13Q92995 863 aaPredicted RBP7.68□□□□□ -1.18
CNOT4-201ENST00000315544 RNF166Q96A37 237 aaPredicted RBP7.68□□□□□ -1.18
CNOT4-201ENST00000315544 WBP1Q96G27 269 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 CIB1Q99828 191 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 SLC25A23Q9BV35 468 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 ZNF576Q9H609 170 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 FAM118AQ9NWS6 357 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 RSL24D1Q9UHA3 163 aaKnown RBP7.68□□□□□ -1.18
CNOT4-201ENST00000315544 SLCO3A1Q9UIG8 710 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 SLC27A5Q9Y2P5 690 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 FRYLO94915 3013 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 FAM234BA2RU67 622 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 F5H423 210 aaPredicted RBP7.67□□□□□ -1.18
CNOT4-201ENST00000315544 TMCC1O94876 653 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 CYBBP04839 570 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 CDKN2CP42773 168 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 PLA2G16P53816 162 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 GEMP55040 296 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 NME5P56597 212 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 ERVK-8P63133 956 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 ABRAXAS2Q15018 415 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 VASNQ6EMK4 673 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 TIGD7Q6NT04 549 aaPredicted RBP7.67□□□□□ -1.18
CNOT4-201ENST00000315544 RNF19BQ6ZMZ0 732 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 ZNF354CQ86Y25 554 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 MYO1HQ8N1T3 1032 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 PIK3C3Q8NEB9 887 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 CCDC126Q96EE4 140 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 ASB2Q96Q27 587 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 TCF12Q99081 682 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 MRGBPQ9NV56 204 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 INTS6Q9UL03 887 aaKnown RBP7.67□□□□□ -1.18
CNOT4-201ENST00000315544 HCN2Q9UL51 889 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 DHRS7Q9Y394 339 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 SEC24AO95486 1093 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 TGFB1P01137 390 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 CDH1P12830 882 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 MSH3P20585 1137 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 EPHA2P29317 976 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 AVPR1AP37288 418 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 CAPGP40121 348 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 CXCR4P61073 352 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 NAA20P61599 178 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 SEMG2Q02383 582 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 MVKQ03426 396 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 CLCQ05315 142 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 FLOT2Q14254 428 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 SLC22A15Q8IZD6 547 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 TSPAN14Q8NG11 270 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 NKX2-4Q9H2Z4 354 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 CLK4Q9HAZ1 481 aaKnown RBP7.67□□□□□ -1.18
CNOT4-201ENST00000315544 SCHIP1Q9P0W5 487 aaPredicted RBP7.67□□□□□ -1.18
CNOT4-201ENST00000315544 SLC6A14Q9UN76 642 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 SLC22A1O15245 554 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 LATS1O95835 1130 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 THP07101 528 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 ENTPD1P49961 510 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 DAPP51397 102 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 ALDH3A2P51648 485 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 SLC7A2P52569 658 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms