RNA–Protein interactions for RNA: ENST00000311034.6

NPAS4-201, Transcript of neuronal PAS domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS4, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-201ENST00000311034 ABCC13Q9NSE7 274 aa13.34□□□□□ -0.27
NPAS4-201ENST00000311034 TYW5A2RUC4 315 aaKnown RBP13.34□□□□□ -0.27
NPAS4-201ENST00000311034 RPP40O75818 363 aaKnown RBP13.34□□□□□ -0.27
NPAS4-201ENST00000311034 ZNF135P52742 658 aaPredicted RBP13.34□□□□□ -0.27
NPAS4-201ENST00000311034 ATN1P54259 1190 aaPredicted RBP13.34□□□□□ -0.27
NPAS4-201ENST00000311034 RAPSNQ13702 412 aa13.34□□□□□ -0.27
NPAS4-201ENST00000311034 OXA1LQ15070 435 aa13.34□□□□□ -0.27
NPAS4-201ENST00000311034 COLEC12Q5KU26 742 aa13.34□□□□□ -0.27
NPAS4-201ENST00000311034 TXNDC11Q6PKC3 985 aa13.34□□□□□ -0.27
NPAS4-201ENST00000311034 SLC16A12Q6ZSM3 486 aa13.34□□□□□ -0.27
NPAS4-201ENST00000311034 SYTL1Q8IYJ3 562 aa13.34□□□□□ -0.27
NPAS4-201ENST00000311034 CLIP4Q8N3C7 705 aa13.34□□□□□ -0.27
NPAS4-201ENST00000311034 IGSF8Q969P0 613 aa13.34□□□□□ -0.27
NPAS4-201ENST00000311034 ASPSCR1Q9BZE9 553 aa13.34□□□□□ -0.27
NPAS4-201ENST00000311034 PAK1IP1Q9NWT1 392 aaPredicted RBP13.34□□□□□ -0.27
NPAS4-201ENST00000311034 ENPP5Q9UJA9 477 aa13.34□□□□□ -0.27
NPAS4-201ENST00000311034 ZNF225Q9UK10 706 aa13.34□□□□□ -0.27
NPAS4-201ENST00000311034 MTX2O75431 263 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 HSMCR30P0CW71 290 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 DBTP11182 482 aaKnown RBP13.33□□□□□ -0.28
NPAS4-201ENST00000311034 MYCLP1P12525 358 aaPredicted RBP13.33□□□□□ -0.28
NPAS4-201ENST00000311034 PFKLP17858 780 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 HSPA7P48741 367 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 NEK2P51955 445 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 EMX1Q04741 257 aaPredicted RBP13.33□□□□□ -0.28
NPAS4-201ENST00000311034 TUBA3CQ13748 450 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 MAPKAPK3Q16644 382 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 ADPRMQ3LIE5 342 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 GTF2IRD2BQ6EKJ0 949 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 TMEM179BQ7Z7N9 219 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 GTF2IRD2Q86UP8 949 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 P2RY8Q86VZ1 359 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 PTRH1Q86Y79 214 aaKnown RBP13.33□□□□□ -0.28
NPAS4-201ENST00000311034 RASAL3Q86YV0 1011 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 PGBD5Q8N414 524 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 ZNF599Q96NL3 588 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 PPP1R2P1Q96PQ5 205 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 MBOAT4Q96T53 435 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 MUC13Q9H3R2 512 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 TFB2MQ9H5Q4 396 aaKnown RBP13.33□□□□□ -0.28
NPAS4-201ENST00000311034 C3orf18Q9UK00 162 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 NEU3Q9UQ49 428 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 SBF1O95248 1867 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 RBM47A0AV96 593 aaKnown RBP13.33□□□□□ -0.28
NPAS4-201ENST00000311034 UPK1AO00322 258 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 FAM20BO75063 409 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 CPSF4O95639 269 aaKnown RBP13.33□□□□□ -0.28
NPAS4-201ENST00000311034 SERPINA1P01009 418 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 ALPIP09923 528 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 NR4A2P43354 598 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 NPTX1Q15818 432 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 RFTN2Q52LD8 501 aaPredicted RBP13.33□□□□□ -0.28
NPAS4-201ENST00000311034 ATXN7L2Q5T6C5 722 aaPredicted RBP13.33□□□□□ -0.28
NPAS4-201ENST00000311034 FBXL22Q6P050 247 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 LETMD1Q6P1Q0 360 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 AGMOQ6ZNB7 445 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 MBOAT1Q6ZNC8 495 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 ANKRD13BQ86YJ7 626 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 KLHDC9Q8NEP7 349 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 KIAA1191Q96A73 305 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 FUBP1Q96AE4 644 aaKnown RBP13.33□□□□□ -0.28
NPAS4-201ENST00000311034 CINPQ9BW66 212 aaPredicted RBP13.33□□□□□ -0.28
NPAS4-201ENST00000311034 NDEL1Q9GZM8 345 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 ATP13A1Q9HD20 1204 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 NMRK2Q9NPI5 230 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 FKBPLQ9UIM3 349 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 LOC100506127A0A0U1RQW1 187 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 TRIM64A6NGJ6 449 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 TULP3O75386 442 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 S100BP04271 92 aaPredicted RBP13.33□□□□□ -0.28
NPAS4-201ENST00000311034 UGT2B4P06133 528 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 PABPC1P11940 636 aaKnown RBP13.33□□□□□ -0.28
NPAS4-201ENST00000311034 BMP1P13497 986 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 TCEA1P23193 301 aaKnown RBP13.33□□□□□ -0.28
NPAS4-201ENST00000311034 STC1P52823 247 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 NFKB2Q00653 900 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 TIAL1Q01085 375 aaKnown RBP eCLIP13.33□□□□□ -0.28
NPAS4-201ENST00000311034 BRMS1LQ5PSV4 323 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 FAM180BQ6P0A1 224 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 ZFAND4Q86XD8 727 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 TMEM86AQ8N2M4 240 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 KRTCAP2Q8N6L1 136 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 SCAIQ8N9R8 606 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 CDKN2AIPNLQ96HQ2 116 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 RBM4BQ9BQ04 359 aaKnown RBP13.33□□□□□ -0.28
NPAS4-201ENST00000311034 RBM4Q9BWF3 364 aaKnown RBP13.33□□□□□ -0.28
NPAS4-201ENST00000311034 ZYG11BQ9C0D3 744 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 IKZF5Q9H5V7 419 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 KIF17Q9P2E2 1029 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 DNAJB9Q9UBS3 223 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 PCTPQ9UKL6 214 aa13.33□□□□□ -0.28
NPAS4-201ENST00000311034 hCG_2039718K7EN88 272 aa13.32□□□□□ -0.28
NPAS4-201ENST00000311034 CXCR6O00574 342 aa13.32□□□□□ -0.28
NPAS4-201ENST00000311034 SEC22BO75396 215 aa13.32□□□□□ -0.28
NPAS4-201ENST00000311034 VPS26AO75436 327 aa13.32□□□□□ -0.28
NPAS4-201ENST00000311034 MMP2P08253 660 aa13.32□□□□□ -0.28
NPAS4-201ENST00000311034 SERPINF2P08697 491 aa13.32□□□□□ -0.28
NPAS4-201ENST00000311034 CYP2C18P33260 490 aa13.32□□□□□ -0.28
NPAS4-201ENST00000311034 ERVPABLB-1P60509 514 aa13.32□□□□□ -0.28
NPAS4-201ENST00000311034 HSPA14Q0VDF9 509 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms