RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 ASB18Q6ZVZ8 466 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 ZNF565Q8N9K5 539 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 C12orf50Q8NA57 414 aaPredicted RBP15.26■□□□□ 0.03
HCFC1-201ENST00000310441 IRGQQ8WZA9 623 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 TMPRSS11EQ9UL52 423 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 SH3D21A4FU49 640 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 NPHS1O60500 1241 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 LGALS2P05162 132 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 ETS2P15036 469 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 FOSL1P15407 271 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 OR2B6P58173 313 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 FASTKD3Q14CZ7 662 aaKnown RBP15.25■□□□□ 0.03
HCFC1-201ENST00000310441 IFI44LQ53G44 452 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 CADM2Q8N3J6 435 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.25■□□□□ 0.03
HCFC1-201ENST00000310441 SERINC1Q9NRX5 453 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 TBC1D3DA0A087WVF3 549 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 TBC1D3IA0A087WXS9 549 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 TBC1D3EA0A087X179 549 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 TBC1D3KA0A087X1G2 549 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 TBC1D3FA6NER0 549 aaPredicted RBP15.25■□□□□ 0.03
HCFC1-201ENST00000310441 TBC1D3LB9A6J9 549 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 H0YGN5 161 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 NDST3O95803 873 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 TBC1D3HP0C7X1 549 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 ALPPL2P10696 532 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 DCDC1P59894 354 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 EN1Q05925 392 aaPredicted RBP15.25■□□□□ 0.03
HCFC1-201ENST00000310441 TEX44Q53QW1 395 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 SPIN4Q56A73 249 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 RNASEH2BQ5TBB1 312 aaKnown RBP15.25■□□□□ 0.03
HCFC1-201ENST00000310441 REP15Q6BDI9 236 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 TBC1D3GQ6DHY5 549 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 TBC1D3CQ6IPX1 549 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 CACUL1Q86Y37 369 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 SPPL2CQ8IUH8 684 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 TBC1D3Q8IZP1 549 aaPredicted RBP15.25■□□□□ 0.03
HCFC1-201ENST00000310441 EPYCQ99645 322 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.25■□□□□ 0.03
HCFC1-201ENST00000310441 SNAP47Q5SQN1 464 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 GEMIN6Q8WXD5 167 aaKnown RBP15.25■□□□□ 0.03
HCFC1-201ENST00000310441 SIPA1Q96FS4 1042 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 ACO2Q99798 780 aaKnown RBP15.25■□□□□ 0.03
HCFC1-201ENST00000310441 IFT27Q9BW83 186 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 TM6SF2Q9BZW4 377 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 AP2A1O95782 977 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 PRKCDQ05655 676 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 SPOCK2Q92563 424 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 SCP2D1Q9UJQ7 156 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 NOX1Q9Y5S8 564 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 ZNF99A8MXY4 864 aaPredicted RBP15.25■□□□□ 0.03
HCFC1-201ENST00000310441 LYPLA1O75608 230 aaPredicted RBP15.25■□□□□ 0.03
HCFC1-201ENST00000310441 IFNA2P01563 188 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 AFF1P51825 1210 aaKnown RBP15.25■□□□□ 0.03
HCFC1-201ENST00000310441 ASTE1Q2TB18 679 aaPredicted RBP15.25■□□□□ 0.03
HCFC1-201ENST00000310441 LIN52Q52LA3 116 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 PACRGLQ8N7B6 248 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 ACER1Q8TDN7 264 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 NCSTNQ92542 709 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 LRRC72A6NJI9 287 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 PAGE1O75459 146 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 NFATC1O95644 943 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 RPIAP49247 311 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 CRISP3P54108 245 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 VWA5B1Q5TIE3 1220 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 HECTD2Q5U5R9 776 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 SLC30A10Q6XR72 485 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 ERVK-5Q9HDB9 667 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 KCNN3Q9UGI6 736 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 CYTH4Q9UIA0 394 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 TLR5O60602 858 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 F8A1P23610 371 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 NSG1P42857 185 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 KCTD8Q6ZWB6 473 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 CBR4Q8N4T8 237 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 VANGL1Q8TAA9 524 aaPredicted RBP15.25■□□□□ 0.03
HCFC1-201ENST00000310441 TUBA1CQ9BQE3 449 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 PRDM12Q9H4Q4 367 aa15.25■□□□□ 0.03
HCFC1-201ENST00000310441 H7C2Y5 167 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 ALPPP05187 535 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 ALG1LQ6GMV1 187 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 SSX6Q7RTT6 188 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 MKKSQ9NPJ1 570 aaPredicted RBP15.24■□□□□ 0.03
HCFC1-201ENST00000310441 SPATA31A1Q5TZJ5 1347 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 OR2AG2A6NM03 316 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 PRR5-ARHGAP8B1AHC4 643 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 AQP1P29972 269 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 GALK1P51570 392 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 CASP9P55211 416 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 ARHGAP8P85298 464 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 FIBCD1Q8N539 461 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 OR6K6Q8NGW6 343 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 TOP1MTQ969P6 601 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 ZNF726A6NNF4 738 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 CPNE3O75131 537 aaKnown RBP15.24■□□□□ 0.03
HCFC1-201ENST00000310441 DUSP4Q13115 394 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 ADAMTS13Q76LX8 1427 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 AGLP35573 1532 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 CLCN4P51793 760 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 WNT3AP56704 352 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms