RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 GMPSP49915 693 aaPredicted RBP1.22□□□□□ -2.21
CEP290-201ENST00000309041 CLCNKAP51800 687 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 CEBPGP53567 150 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 RIPPLY3P57055 190 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 COPS2P61201 443 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 MAD2L1Q13257 205 aaPredicted RBP1.22□□□□□ -2.21
CEP290-201ENST00000309041 PSG3Q16557 428 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 NFIL3Q16649 462 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 PRAMEF13Q5VWM6 474 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 GPR139Q6DWJ6 353 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 WDR93Q6P2C0 686 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 ADGRD1Q6QNK2 874 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 SNX20Q7Z614 316 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 HERC6Q8IVU3 1022 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 ANGPTL6Q8NI99 470 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 ZNF398Q8TD17 642 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 CCT6BQ92526 530 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 NR4A3Q92570 626 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 TMEM143Q96AN5 459 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 GRAMD1AQ96CP6 724 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 TUBGCP3Q96CW5 907 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 C1orf159Q96HA4 380 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 PIMREGQ9BSJ6 248 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 ZDHHC6Q9H6R6 413 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 NOX3Q9HBY0 568 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 CACNG4Q9UBN1 327 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 LRWD1Q9UFC0 647 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 VPS9D1Q9Y2B5 631 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 KIF1BO60333 1816 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 DICER1Q9UPY3 1922 aaKnown RBP1.22□□□□□ -2.21
CEP290-201ENST00000309041 TRBV23-1A0A0A0MS06 115 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 MSGN1A6NI15 193 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 I3L4J1 428 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 RFXAPO00287 272 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 ADAM20O43506 726 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 XPOTO43592 962 aaKnown RBP1.22□□□□□ -2.21
CEP290-201ENST00000309041 ZBTB14O43829 449 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 HCN1O60741 890 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 CLN5O75503 358 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 CLIC3O95833 236 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 IFNA14P01570 189 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 CELA3AP09093 270 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 UQCRFS1P1P0C7P4 283 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 C8orf89P0DMQ9 161 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 HSPA5P11021 654 aaKnown RBP1.22□□□□□ -2.21
CEP290-201ENST00000309041 GPR183P32249 361 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 SREBF1P36956 1147 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 SERPINB8P50452 374 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 COPAP53621 1224 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 RAB4BP61018 213 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 SEC61A1P61619 476 aaKnown RBP1.22□□□□□ -2.21
CEP290-201ENST00000309041 PSMC5P62195 406 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 XIAPP98170 497 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 CYCSP99999 105 aaKnown RBP1.22□□□□□ -2.21
CEP290-201ENST00000309041 CXCL9Q07325 125 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 CALCOCO2Q13137 446 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 GK3PQ14409 553 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 PLCB4Q15147 1175 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 ELF2Q15723 593 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 NRF1Q16656 503 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 PRICKLE4Q2TBC4 344 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 ASPRV1Q53RT3 343 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 KAZNQ674X7 775 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 LRRC66Q68CR7 880 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 ADNP2Q6IQ32 1131 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 LRIG3Q6UXM1 1119 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 C20orf204Q6ZNR8 217 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 RBM44Q6ZP01 1051 aaKnown RBP1.22□□□□□ -2.21
CEP290-201ENST00000309041 MICALCLQ6ZW33 695 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 ZER1Q7Z7L7 766 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 MON1AQ86VX9 555 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 TREML1Q86YW5 311 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 ARHGAP12Q8IWW6 846 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 ST13P4Q8IZP2 240 aaPredicted RBP1.22□□□□□ -2.21
CEP290-201ENST00000309041 SHKBP1Q8TBC3 707 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 MOCOSQ96EN8 888 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 FOXC2Q99958 501 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 DPYSL5Q9BPU6 564 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 ACE2Q9BYF1 805 aaPredicted RBP1.22□□□□□ -2.21
CEP290-201ENST00000309041 MRPL37Q9BZE1 423 aaKnown RBP1.22□□□□□ -2.21
CEP290-201ENST00000309041 MFFQ9GZY8 342 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 KLHL25Q9H0H3 589 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 TPK1Q9H3S4 243 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 NANOGQ9H9S0 305 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 TMEM9BQ9NQ34 198 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 TREX1Q9NSU2 369 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 MKS1Q9NXB0 559 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 SLC39A1Q9NY26 324 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 XPR1Q9UBH6 696 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 SAMHD1Q9Y3Z3 626 aaKnown RBP1.22□□□□□ -2.21
CEP290-201ENST00000309041 LAMB2P55268 1798 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 A0A087X1B8 175 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 PIPSLA2A3N6 862 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 LINC01387J3KSC0 135 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 SNAP23O00161 211 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 OIP5O43482 229 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 OTCP00480 354 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 SERPIND1P05546 499 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 RHOP08100 348 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 NR3C2P08235 984 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms