RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 CARFQ8N187 725 aa19.26■□□□□ 0.67
PDZRN3-202ENST00000308537 ESX1Q8N693 406 aa19.26■□□□□ 0.67
PDZRN3-202ENST00000308537 GALNT6Q8NCL4 622 aa19.26■□□□□ 0.67
PDZRN3-202ENST00000308537 MAIP1Q8WWC4 291 aa19.26■□□□□ 0.67
PDZRN3-202ENST00000308537 TFGQ92734 400 aaPredicted RBP19.26■□□□□ 0.67
PDZRN3-202ENST00000308537 ZNF501Q96CX3 271 aaPredicted RBP19.26■□□□□ 0.67
PDZRN3-202ENST00000308537 ELMO2Q96JJ3 720 aa19.26■□□□□ 0.67
PDZRN3-202ENST00000308537 PITPNM3Q9BZ71 974 aa19.26■□□□□ 0.67
PDZRN3-202ENST00000308537 TRIT1Q9H3H1 467 aaKnown RBP19.26■□□□□ 0.67
PDZRN3-202ENST00000308537 KCNF1Q9H3M0 494 aa19.26■□□□□ 0.67
PDZRN3-202ENST00000308537 MVB12BQ9H7P6 319 aa19.26■□□□□ 0.67
PDZRN3-202ENST00000308537 VPS37BQ9H9H4 285 aa19.26■□□□□ 0.67
PDZRN3-202ENST00000308537 AKIRIN1Q9H9L7 192 aaPredicted RBP19.26■□□□□ 0.67
PDZRN3-202ENST00000308537 NEU2Q9Y3R4 380 aa19.26■□□□□ 0.67
PDZRN3-202ENST00000308537 SPENQ96T58 3664 aaKnown RBP19.26■□□□□ 0.67
PDZRN3-202ENST00000308537 BTN3A1O00481 513 aa19.25■□□□□ 0.67
PDZRN3-202ENST00000308537 TPSB2P20231 275 aa19.25■□□□□ 0.67
PDZRN3-202ENST00000308537 LMAN1P49257 510 aa19.25■□□□□ 0.67
PDZRN3-202ENST00000308537 TUBB3Q13509 450 aa19.25■□□□□ 0.67
PDZRN3-202ENST00000308537 KCNJ11Q14654 390 aa19.25■□□□□ 0.67
PDZRN3-202ENST00000308537 TPSAB1Q15661 275 aa19.25■□□□□ 0.67
PDZRN3-202ENST00000308537 PCID2Q5JVF3 399 aa19.25■□□□□ 0.67
PDZRN3-202ENST00000308537 NLRP9Q7RTR0 991 aa19.25■□□□□ 0.67
PDZRN3-202ENST00000308537 LDB1Q86U70 411 aaPredicted RBP19.25■□□□□ 0.67
PDZRN3-202ENST00000308537 PPP1R3BQ86XI6 285 aa19.25■□□□□ 0.67
PDZRN3-202ENST00000308537 ZSCAN1Q8NBB4 408 aa19.25■□□□□ 0.67
PDZRN3-202ENST00000308537 SIDT2Q8NBJ9 832 aaKnown RBP19.25■□□□□ 0.67
PDZRN3-202ENST00000308537 FLVCR1-AS1Q8TAF5 88 aa19.25■□□□□ 0.67
PDZRN3-202ENST00000308537 MS4A14Q96JA4 679 aa19.25■□□□□ 0.67
PDZRN3-202ENST00000308537 FERD3LQ96RJ6 166 aa19.25■□□□□ 0.67
PDZRN3-202ENST00000308537 GPN2Q9H9Y4 310 aaPredicted RBP19.25■□□□□ 0.67
PDZRN3-202ENST00000308537 FGF21Q9NSA1 209 aa19.25■□□□□ 0.67
PDZRN3-202ENST00000308537 TTC7AQ9ULT0 858 aaPredicted RBP19.25■□□□□ 0.67
PDZRN3-202ENST00000308537 ICKQ9UPZ9 632 aa19.25■□□□□ 0.67
PDZRN3-202ENST00000308537 MRPS18BQ9Y676 258 aaKnown RBP19.25■□□□□ 0.67
PDZRN3-202ENST00000308537 RPS6KL1Q9Y6S9 549 aa19.25■□□□□ 0.67
PDZRN3-202ENST00000308537 TENM4Q6N022 2769 aa19.24■□□□□ 0.67
PDZRN3-202ENST00000308537 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.24■□□□□ 0.67
PDZRN3-202ENST00000308537 QSOX1O00391 747 aa19.24■□□□□ 0.67
PDZRN3-202ENST00000308537 ZBTB11O95625 1053 aaPredicted RBP19.24■□□□□ 0.67
PDZRN3-202ENST00000308537 FAM87AP0C7U9 286 aa19.24■□□□□ 0.67
PDZRN3-202ENST00000308537 NMBRP28336 390 aa19.24■□□□□ 0.67
PDZRN3-202ENST00000308537 OAS2P29728 719 aaKnown RBP19.24■□□□□ 0.67
PDZRN3-202ENST00000308537 CCR7P32248 378 aa19.24■□□□□ 0.67
PDZRN3-202ENST00000308537 SESN2P58004 480 aaPredicted RBP19.24■□□□□ 0.67
PDZRN3-202ENST00000308537 HSD11B2P80365 405 aa19.24■□□□□ 0.67
PDZRN3-202ENST00000308537 BASP1P80723 227 aaKnown RBP19.24■□□□□ 0.67
PDZRN3-202ENST00000308537 LAMB3Q13751 1172 aa19.24■□□□□ 0.67
PDZRN3-202ENST00000308537 CYP1B1Q16678 543 aa19.24■□□□□ 0.67
PDZRN3-202ENST00000308537 CRTC2Q53ET0 693 aaPredicted RBP19.24■□□□□ 0.67
PDZRN3-202ENST00000308537 ZNF789Q5FWF6 425 aa19.24■□□□□ 0.67
PDZRN3-202ENST00000308537 C6orf15Q6UXA7 325 aaPredicted RBP19.24■□□□□ 0.67
PDZRN3-202ENST00000308537 C4orf22Q6V702 233 aa19.24■□□□□ 0.67
PDZRN3-202ENST00000308537 VRK3Q8IV63 474 aa19.24■□□□□ 0.67
PDZRN3-202ENST00000308537 OR5AR1Q8NGP9 310 aa19.24■□□□□ 0.67
PDZRN3-202ENST00000308537 LCN9Q8WX39 176 aa19.24■□□□□ 0.67
PDZRN3-202ENST00000308537 ELMO1Q92556 727 aa19.24■□□□□ 0.67
PDZRN3-202ENST00000308537 ANP32BQ92688 251 aaKnown RBP19.24■□□□□ 0.67
PDZRN3-202ENST00000308537 FCRL4Q96PJ5 515 aa19.24■□□□□ 0.67
PDZRN3-202ENST00000308537 HGH1Q9BTY7 390 aa19.24■□□□□ 0.67
PDZRN3-202ENST00000308537 KIFC1Q9BW19 673 aa19.24■□□□□ 0.67
PDZRN3-202ENST00000308537 XKR8Q9H6D3 395 aa19.24■□□□□ 0.67
PDZRN3-202ENST00000308537 GRPEL1Q9HAV7 217 aa19.24■□□□□ 0.67
PDZRN3-202ENST00000308537 UBA6A0AVT1 1052 aaPredicted RBP19.23■□□□□ 0.67
PDZRN3-202ENST00000308537 ZNF891A8MT65 544 aaPredicted RBP19.23■□□□□ 0.67
PDZRN3-202ENST00000308537 IFRD1O00458 451 aaPredicted RBP19.23■□□□□ 0.67
PDZRN3-202ENST00000308537 GPC4O75487 556 aa19.23■□□□□ 0.67
PDZRN3-202ENST00000308537 GAS8O95995 478 aa19.23■□□□□ 0.67
PDZRN3-202ENST00000308537 FTH1P02794 183 aa19.23■□□□□ 0.67
PDZRN3-202ENST00000308537 PLA2G2AP14555 144 aa19.23■□□□□ 0.67
PDZRN3-202ENST00000308537 ST6GAL1P15907 406 aa19.23■□□□□ 0.67
PDZRN3-202ENST00000308537 PRDX3P30048 256 aaKnown RBP19.23■□□□□ 0.67
PDZRN3-202ENST00000308537 ACY1Q03154 408 aa19.23■□□□□ 0.67
PDZRN3-202ENST00000308537 PRKG2Q13237 762 aa19.23■□□□□ 0.67
PDZRN3-202ENST00000308537 GPR19Q15760 415 aa19.23■□□□□ 0.67
PDZRN3-202ENST00000308537 LYPLAL1Q5VWZ2 237 aa19.23■□□□□ 0.67
PDZRN3-202ENST00000308537 ANKRD22Q5VYY1 191 aa19.23■□□□□ 0.67
PDZRN3-202ENST00000308537 LRRC8BQ6P9F7 803 aa19.23■□□□□ 0.67
PDZRN3-202ENST00000308537 ZNF517Q6ZMY9 492 aaPredicted RBP19.23■□□□□ 0.67
PDZRN3-202ENST00000308537 RASGRP3Q8IV61 690 aa19.23■□□□□ 0.67
PDZRN3-202ENST00000308537 SLC38A9Q8NBW4 561 aa19.23■□□□□ 0.67
PDZRN3-202ENST00000308537 PPHLN1Q8NEY8 458 aaKnown RBP19.23■□□□□ 0.67
PDZRN3-202ENST00000308537 OR6P1Q8NGX9 317 aa19.23■□□□□ 0.67
PDZRN3-202ENST00000308537 STARD8Q92502 1023 aa19.23■□□□□ 0.67
PDZRN3-202ENST00000308537 MENTQ9BUN1 341 aa19.23■□□□□ 0.67
PDZRN3-202ENST00000308537 AP1M1Q9BXS5 423 aa19.23■□□□□ 0.67
PDZRN3-202ENST00000308537 IL22Q9GZX6 179 aa19.23■□□□□ 0.67
PDZRN3-202ENST00000308537 P2RY12Q9H244 342 aa19.23■□□□□ 0.67
PDZRN3-202ENST00000308537 SRMSQ9H3Y6 488 aa19.23■□□□□ 0.67
PDZRN3-202ENST00000308537 C1GALT1Q9NS00 363 aa19.23■□□□□ 0.67
PDZRN3-202ENST00000308537 STARD5Q9NSY2 213 aa19.23■□□□□ 0.67
PDZRN3-202ENST00000308537 SYBUQ9NX95 663 aa19.23■□□□□ 0.67
PDZRN3-202ENST00000308537 CROTQ9UKG9 612 aa19.23■□□□□ 0.67
PDZRN3-202ENST00000308537 RARRES3Q9UL19 164 aa19.23■□□□□ 0.67
PDZRN3-202ENST00000308537 JRKLQ9Y4A0 524 aa19.23■□□□□ 0.67
PDZRN3-202ENST00000308537 SLC9B1P1A6NJY1 282 aa19.22■□□□□ 0.67
PDZRN3-202ENST00000308537 IQCF5A8MTL0 148 aa19.22■□□□□ 0.67
PDZRN3-202ENST00000308537 TMEM63AO94886 807 aa19.22■□□□□ 0.67
PDZRN3-202ENST00000308537 OR56A5P0C7T3 313 aa19.22■□□□□ 0.67
PDZRN3-202ENST00000308537 MGAT1P26572 445 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms