RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 CHMP24386 653 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 GRIK2Q13002 908 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 AADACL2Q6P093 401 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 SP8Q8IXZ3 490 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 GRHL3Q8TE85 626 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 C7orf34Q96L11 122 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 DPAGT1Q9H3H5 408 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 LACTBL1A8MY62 500 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 PRR5-ARHGAP8B1AHC4 643 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 ITGA10O75578 1167 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 MC4RP32245 332 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 ARHGAP8P85298 464 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 DUPD1Q68J44 220 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 TSEN2Q8NCE0 465 aaKnown RBP13.22□□□□□ -0.29
TRIM56-201ENST00000306085 HDAC10Q969S8 669 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 BARD1Q99728 777 aaKnown RBP13.22□□□□□ -0.29
TRIM56-201ENST00000306085 BEX2Q9BXY8 128 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 BEX1Q9HBH7 125 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 TMEM39AQ9NV64 488 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 TMEM184CQ9NVA4 438 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 CDC42BPBQ9Y5S2 1711 aa13.21□□□□□ -0.29
TRIM56-201ENST00000306085 CCDC58Q4VC31 144 aa13.21□□□□□ -0.29
TRIM56-201ENST00000306085 HCAR2Q8TDS4 363 aa13.21□□□□□ -0.29
TRIM56-201ENST00000306085 CASTOR1Q8WTX7 329 aa13.21□□□□□ -0.29
TRIM56-201ENST00000306085 ASAH2Q9NR71 780 aa13.21□□□□□ -0.29
TRIM56-201ENST00000306085 WDPCPO95876 746 aa13.21□□□□□ -0.29
TRIM56-201ENST00000306085 MATKP42679 507 aa13.21□□□□□ -0.29
TRIM56-201ENST00000306085 RAB27AP51159 221 aa13.21□□□□□ -0.29
TRIM56-201ENST00000306085 ZNF81P51508 661 aa13.21□□□□□ -0.29
TRIM56-201ENST00000306085 FXYD6P3P58550 94 aa13.21□□□□□ -0.29
TRIM56-201ENST00000306085 UBQLN2Q9UHD9 624 aa13.21□□□□□ -0.29
TRIM56-201ENST00000306085 MAB21L2Q9Y586 359 aa13.21□□□□□ -0.29
TRIM56-201ENST00000306085 PCDHGB1Q9Y5G3 927 aa13.21□□□□□ -0.29
TRIM56-201ENST00000306085 A0A0U1RQK1 487 aa13.21□□□□□ -0.29
TRIM56-201ENST00000306085 HHLA1C9JL84 531 aa13.21□□□□□ -0.29
TRIM56-201ENST00000306085 PCDHGA12O60330 932 aa13.21□□□□□ -0.29
TRIM56-201ENST00000306085 EIF1AXP47813 144 aaKnown RBP13.21□□□□□ -0.29
TRIM56-201ENST00000306085 MAXP61244 160 aa13.21□□□□□ -0.29
TRIM56-201ENST00000306085 KLHL36Q8N4N3 616 aa13.21□□□□□ -0.29
TRIM56-201ENST00000306085 RBM18Q96H35 190 aaKnown RBP13.21□□□□□ -0.29
TRIM56-201ENST00000306085 ATG13O75143 517 aa13.21□□□□□ -0.29
TRIM56-201ENST00000306085 ZNF45Q02386 682 aa13.21□□□□□ -0.29
TRIM56-201ENST00000306085 GRB10Q13322 594 aa13.21□□□□□ -0.29
TRIM56-201ENST00000306085 GANABQ14697 944 aaKnown RBP13.21□□□□□ -0.29
TRIM56-201ENST00000306085 GPR153Q6NV75 609 aa13.21□□□□□ -0.29
TRIM56-201ENST00000306085 REP15Q6BDI9 236 aa13.21□□□□□ -0.29
TRIM56-201ENST00000306085 IL7RP16871 459 aa13.21□□□□□ -0.29
TRIM56-201ENST00000306085 DLSTP36957 453 aa13.21□□□□□ -0.29
TRIM56-201ENST00000306085 DCST2Q5T1A1 773 aa13.21□□□□□ -0.29
TRIM56-201ENST00000306085 PGM2Q96G03 612 aa13.21□□□□□ -0.29
TRIM56-201ENST00000306085 FARSBQ9NSD9 589 aaKnown RBP13.21□□□□□ -0.29
TRIM56-201ENST00000306085 NDUFAF4Q9P032 175 aa13.21□□□□□ -0.29
TRIM56-201ENST00000306085 HSPB11Q9Y547 144 aa13.21□□□□□ -0.29
TRIM56-201ENST00000306085 SLC35F4A4IF30 521 aa13.21□□□□□ -0.3
TRIM56-201ENST00000306085 SGCBQ16585 318 aa13.21□□□□□ -0.3
TRIM56-201ENST00000306085 MSANTD2Q6P1R3 559 aa13.21□□□□□ -0.3
TRIM56-201ENST00000306085 CHST7Q9NS84 486 aa13.21□□□□□ -0.3
TRIM56-201ENST00000306085 ADGRL2O95490 1459 aa13.21□□□□□ -0.3
TRIM56-201ENST00000306085 ZBTB48P10074 688 aaPredicted RBP13.21□□□□□ -0.3
TRIM56-201ENST00000306085 RPL22P35268 128 aaKnown RBP13.21□□□□□ -0.3
TRIM56-201ENST00000306085 GNG2P59768 71 aa13.21□□□□□ -0.3
TRIM56-201ENST00000306085 EIPR1Q53HC9 387 aa13.21□□□□□ -0.3
TRIM56-201ENST00000306085 GALNT12Q8IXK2 581 aa13.21□□□□□ -0.3
TRIM56-201ENST00000306085 PCTPQ9UKL6 214 aa13.21□□□□□ -0.3
TRIM56-201ENST00000306085 SPIN1Q9Y657 262 aaPredicted RBP13.21□□□□□ -0.3
TRIM56-201ENST00000306085 A0A1W2PRQ8 180 aa13.21□□□□□ -0.3
TRIM56-201ENST00000306085 EIF1AYO14602 144 aaKnown RBP13.21□□□□□ -0.3
TRIM56-201ENST00000306085 METTL7BQ6UX53 244 aa13.21□□□□□ -0.3
TRIM56-201ENST00000306085 ACBD4Q8NC06 268 aa13.21□□□□□ -0.3
TRIM56-201ENST00000306085 LRRN4CLQ8ND94 238 aa13.21□□□□□ -0.3
TRIM56-201ENST00000306085 VIRMAQ69YN4 1812 aaKnown RBP13.21□□□□□ -0.3
TRIM56-201ENST00000306085 SHOXO15266 292 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 GABRB2P47870 512 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 PLEKHH3Q7Z736 793 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 NAT16Q8N8M0 369 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 RETREG1Q9H6L5 497 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 TVP23BQ9NYZ1 205 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 ATP7BP35670 1465 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 PEX14O75381 377 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 UBXN7O94888 489 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 MPSTP25325 297 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 SLC3A1Q07837 685 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 CD47Q08722 323 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 NDUFA9Q16795 377 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 MYOZ2Q9NPC6 264 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 YTHDF3Q7Z739 585 aaKnown RBP13.2□□□□□ -0.3
TRIM56-201ENST00000306085 PRSS58Q8IYP2 241 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 ZCCHC10Q8TBK6 192 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 POLR2J2Q9GZM3 115 aaKnown RBP13.2□□□□□ -0.3
TRIM56-201ENST00000306085 RCOR3Q9P2K3 495 aaPredicted RBP13.2□□□□□ -0.3
TRIM56-201ENST00000306085 UGT2B4P06133 528 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 EFNA1P20827 205 aaPredicted RBP13.2□□□□□ -0.3
TRIM56-201ENST00000306085 CSTF2P33240 577 aaKnown RBP eCLIP13.2□□□□□ -0.3
TRIM56-201ENST00000306085 GNMTQ14749 295 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 IQCCQ4KMZ1 466 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 SV2AQ7L0J3 742 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 PCDHB18PQ96TA0 734 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 M0R233 179 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 XKP51811 444 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 CYP4V2Q6ZWL3 525 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms