RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 CROTQ9UKG9 612 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 RRP15Q9Y3B9 282 aaKnown RBP9.1□□□□□ -0.95
PTPRE-202ENST00000306042 F5P12259 2224 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 C15orf38-AP3S2A0A0A6YYH1 394 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 RGSL1A5PLK6 1076 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 CCNYL3P0C7X3 344 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 HMGA1P17096 107 aaKnown RBP9.09□□□□□ -0.95
PTPRE-202ENST00000306042 POLR2CP19387 275 aaPredicted RBP9.09□□□□□ -0.95
PTPRE-202ENST00000306042 CRHR1P34998 444 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 MASP1P48740 699 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 CLCQ05315 142 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 MRPL58Q14197 206 aaKnown RBP9.09□□□□□ -0.95
PTPRE-202ENST00000306042 CYTH1Q15438 398 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 ARPINQ7Z6K5 226 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 TMEM126BQ8IUX1 230 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 IL22RA1Q8N6P7 574 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 C7orf57Q8NEG2 295 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 TMIEQ8NEW7 156 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 PROX1Q92786 737 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 PYCR2Q96C36 320 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 KLHL25Q9H0H3 589 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 DDX18Q9NVP1 670 aaKnown RBP9.09□□□□□ -0.95
PTPRE-202ENST00000306042 HNRNPCL2B2RXH8 293 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 CACNG3O60359 315 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 KCNH1O95259 989 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 DCNP07585 359 aaKnown RBP9.09□□□□□ -0.95
PTPRE-202ENST00000306042 NR2F1P10589 423 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 CASRP41180 1078 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 BDKRB1P46663 353 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 SLC16A1P53985 500 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 LCP2Q13094 533 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 ALG11Q2TAA5 492 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 EML3Q32P44 896 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 GPAT3Q53EU6 434 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 ANXA8L1Q5VT79 327 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 PRMT9Q6P2P2 845 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 FSTL5Q8N475 847 aaPredicted RBP9.09□□□□□ -0.95
PTPRE-202ENST00000306042 UBR7Q8N806 425 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 KYQ8NBH2 561 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 FBXO15Q8NCQ5 510 aaPredicted RBP9.09□□□□□ -0.95
PTPRE-202ENST00000306042 OXNAD1Q96HP4 312 aaPredicted RBP9.09□□□□□ -0.95
PTPRE-202ENST00000306042 MRGPRX2Q96LB1 330 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 TSSK3Q96PN8 268 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 NR1H4Q96RI1 486 aaPredicted RBP9.09□□□□□ -0.95
PTPRE-202ENST00000306042 EFCAB11Q9BUY7 163 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 USP29Q9HBJ7 922 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 LRTM1Q9HBL6 345 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 FTSJ1Q9UET6 329 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 TAGLN3Q9UI15 199 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 TEKT2Q9UIF3 430 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.09□□□□□ -0.95
PTPRE-202ENST00000306042 PIK3R1P27986 724 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 IL12RB1P42701 662 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 ARCN1P48444 511 aaKnown RBP9.09□□□□□ -0.95
PTPRE-202ENST00000306042 PKNOX1P55347 436 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 NRG1Q02297 640 aaPredicted RBP9.09□□□□□ -0.95
PTPRE-202ENST00000306042 SLC10A2Q12908 348 aaPredicted RBP9.09□□□□□ -0.95
PTPRE-202ENST00000306042 PKDCCQ504Y2 493 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 INTS11Q5TA45 600 aaKnown RBP9.09□□□□□ -0.95
PTPRE-202ENST00000306042 ABHD13Q7L211 337 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 ZNF555Q8NEP9 628 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 FIG4Q92562 907 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 EDAQ92838 391 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 ESAMQ96AP7 390 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 NRBF2Q96F24 287 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 ADPRHL2Q9NX46 363 aa9.09□□□□□ -0.95
PTPRE-202ENST00000306042 SERPINI2O75830 405 aa9.09□□□□□ -0.96
PTPRE-202ENST00000306042 OR6A2O95222 327 aa9.09□□□□□ -0.96
PTPRE-202ENST00000306042 ANXA4P09525 319 aaPredicted RBP9.09□□□□□ -0.96
PTPRE-202ENST00000306042 CPN2P22792 545 aa9.09□□□□□ -0.96
PTPRE-202ENST00000306042 ASMTP46597 345 aa9.09□□□□□ -0.96
PTPRE-202ENST00000306042 SPINT3P49223 89 aa9.09□□□□□ -0.96
PTPRE-202ENST00000306042 RPP38P78345 283 aaKnown RBP9.09□□□□□ -0.96
PTPRE-202ENST00000306042 ADGRD1Q6QNK2 874 aa9.09□□□□□ -0.96
PTPRE-202ENST00000306042 Q6ZSR6 202 aa9.09□□□□□ -0.96
PTPRE-202ENST00000306042 OR9Q1Q8NGQ5 310 aa9.09□□□□□ -0.96
PTPRE-202ENST00000306042 SLCO2A1Q92959 643 aa9.09□□□□□ -0.96
PTPRE-202ENST00000306042 PANX1Q96RD7 426 aa9.09□□□□□ -0.96
PTPRE-202ENST00000306042 CCDC90BQ9GZT6 254 aa9.09□□□□□ -0.96
PTPRE-202ENST00000306042 TFB2MQ9H5Q4 396 aaKnown RBP9.09□□□□□ -0.96
PTPRE-202ENST00000306042 PREBQ9HCU5 417 aa9.09□□□□□ -0.96
PTPRE-202ENST00000306042 CCT8L1PA6NM43 557 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 C2orf74A8MZ97 194 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 C2CD4DB7Z1M9 353 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 K7EPI3 171 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 DFNA5O60443 496 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 TARSP26639 723 aaKnown RBP9.08□□□□□ -0.96
PTPRE-202ENST00000306042 CD38P28907 300 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 HMGCLP35914 325 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 NKX3-2P78367 333 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 C2orf80Q0P641 193 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 TERF2Q15554 542 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 CPTPQ5TA50 214 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 FAM174AQ8TBP5 190 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 NELL1Q92832 810 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 RIT1Q92963 219 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 VPS33AQ96AX1 596 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 EME1Q96AY2 570 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 CHFRQ96EP1 664 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 KIFC1Q9BW19 673 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms