RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 UBE2R2Q712K3 238 aaPredicted RBP6.41□□□□□ -1.38
USP47-201ENST00000305481 GET4Q7L5D6 327 aaPredicted RBP6.41□□□□□ -1.38
USP47-201ENST00000305481 LILRA3Q8N6C8 439 aaPredicted RBP6.41□□□□□ -1.38
USP47-201ENST00000305481 ATP6V1E2Q96A05 226 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 ARRDC3Q96B67 414 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 ASB9Q96DX5 294 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 COQ10AQ96MF6 247 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 ZSCAN5AQ9BUG6 496 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 NTMT1Q9BV86 223 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 PBX4Q9BYU1 374 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 TMEM245Q9H330 911 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 IL1RL2Q9HB29 575 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 PARVBQ9HBI1 364 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 ARL15Q9NXU5 204 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 DEC1Q9P2X7 70 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 CNOT6Q9ULM6 557 aaKnown RBP6.41□□□□□ -1.38
USP47-201ENST00000305481 COQ6Q9Y2Z9 468 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 K7ESM1 405 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 FFAR3O14843 346 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 ANKRD28O15084 1053 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 GPR42O15529 346 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 SYNCRIPO60506 623 aaKnown RBP6.41□□□□□ -1.38
USP47-201ENST00000305481 STK16O75716 305 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 SLCO2B1O94956 709 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 SOD1P00441 154 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 SLC7A2P52569 658 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 ST8SIA6P61647 398 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 CAPRIN1Q14444 709 aaKnown RBP6.41□□□□□ -1.38
USP47-201ENST00000305481 ZNF234Q14588 700 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 RPS6KA2Q15349 733 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 LRRC36Q1X8D7 754 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 HNRNPA1L2Q32P51 320 aaKnown RBP6.41□□□□□ -1.38
USP47-201ENST00000305481 ATP6AP1LQ52LC2 224 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 PDCD4Q53EL6 469 aaKnown RBP6.41□□□□□ -1.38
USP47-201ENST00000305481 SLC44A4Q53GD3 710 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 PAGE3Q5JUK9 113 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 PLEKHS1Q5SXH7 462 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 METTL2BQ6P1Q9 378 aaKnown RBP6.41□□□□□ -1.38
USP47-201ENST00000305481 VITQ6UXI7 678 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 FNDC5Q8NAU1 212 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 GLYATL1Q969I3 302 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 SPDL1Q96EA4 605 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 DCUN1D1Q96GG9 259 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 RSRC1Q96IZ7 334 aaKnown RBP6.41□□□□□ -1.38
USP47-201ENST00000305481 ZNF184Q99676 751 aaPredicted RBP6.41□□□□□ -1.38
USP47-201ENST00000305481 PLA2G2FQ9BZM2 168 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 TRIM8Q9BZR9 551 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 TRPV4Q9HBA0 871 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 HEBP1Q9NRV9 189 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 SLAMF8Q9P0V8 285 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 GULP1Q9UBP9 304 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 SUCOQ9UBS9 1254 aaKnown RBP6.41□□□□□ -1.38
USP47-201ENST00000305481 NDUFAF1Q9Y375 327 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 LRRK1Q38SD2 2015 aa6.4□□□□□ -1.38
USP47-201ENST00000305481 A0A1W2PP18 115 aa6.4□□□□□ -1.38
USP47-201ENST00000305481 RFXAPO00287 272 aa6.4□□□□□ -1.38
USP47-201ENST00000305481 NME4O00746 187 aa6.4□□□□□ -1.38
USP47-201ENST00000305481 LINC01565O15544 149 aa6.4□□□□□ -1.38
USP47-201ENST00000305481 PRAMEF4O60810 478 aa6.4□□□□□ -1.38
USP47-201ENST00000305481 DNAJA2O60884 412 aa6.4□□□□□ -1.38
USP47-201ENST00000305481 SLC22A3O75751 556 aa6.4□□□□□ -1.38
USP47-201ENST00000305481 RSL1D1O76021 490 aaKnown RBP6.4□□□□□ -1.38
USP47-201ENST00000305481 NFATC1O95644 943 aa6.4□□□□□ -1.38
USP47-201ENST00000305481 ANXA5P08758 320 aa6.4□□□□□ -1.38
USP47-201ENST00000305481 ELFN1P0C7U0 828 aa6.4□□□□□ -1.38
USP47-201ENST00000305481 MPC1LP0DKB6 136 aa6.4□□□□□ -1.38
USP47-201ENST00000305481 G6PDP11413 515 aa6.4□□□□□ -1.38
USP47-201ENST00000305481 XPAP23025 273 aaPredicted RBP6.4□□□□□ -1.38
USP47-201ENST00000305481 PEX2P28328 305 aa6.4□□□□□ -1.38
USP47-201ENST00000305481 OPRD1P41143 372 aa6.4□□□□□ -1.38
USP47-201ENST00000305481 CDKL1Q00532 357 aa6.4□□□□□ -1.38
USP47-201ENST00000305481 EMX2Q04743 252 aa6.4□□□□□ -1.38
USP47-201ENST00000305481 ACOX1Q15067 660 aa6.4□□□□□ -1.38
USP47-201ENST00000305481 TLR1Q15399 786 aa6.4□□□□□ -1.38
USP47-201ENST00000305481 PLA2G4EQ3MJ16 856 aa6.4□□□□□ -1.38
USP47-201ENST00000305481 FNDC3BQ53EP0 1204 aaKnown RBP6.4□□□□□ -1.38
USP47-201ENST00000305481 CDKL4Q5MAI5 379 aa6.4□□□□□ -1.38
USP47-201ENST00000305481 PRAMEF9Q5VWM5 478 aa6.4□□□□□ -1.38
USP47-201ENST00000305481 IZUMO2Q6UXV1 221 aa6.4□□□□□ -1.38
USP47-201ENST00000305481 SLC15A3Q8IY34 581 aa6.4□□□□□ -1.38
USP47-201ENST00000305481 LILRA2Q8N149 483 aa6.4□□□□□ -1.38
USP47-201ENST00000305481 MINDY1Q8N5J2 469 aa6.4□□□□□ -1.38
USP47-201ENST00000305481 ELMO1Q92556 727 aa6.4□□□□□ -1.38
USP47-201ENST00000305481 FOXJ1Q92949 421 aa6.4□□□□□ -1.38
USP47-201ENST00000305481 LRRC58Q96CX6 371 aa6.4□□□□□ -1.38
USP47-201ENST00000305481 ERLEC1Q96DZ1 483 aa6.4□□□□□ -1.38
USP47-201ENST00000305481 VPS35Q96QK1 796 aa6.4□□□□□ -1.38
USP47-201ENST00000305481 IGFLR1Q9H665 355 aa6.4□□□□□ -1.38
USP47-201ENST00000305481 RIC8BQ9NVN3 520 aa6.4□□□□□ -1.38
USP47-201ENST00000305481 ABCD2Q9UBJ2 740 aa6.4□□□□□ -1.38
USP47-201ENST00000305481 WNT9AO14904 365 aa6.4□□□□□ -1.39
USP47-201ENST00000305481 CASQ2O14958 399 aaPredicted RBP6.4□□□□□ -1.39
USP47-201ENST00000305481 AREL1O15033 823 aa6.4□□□□□ -1.39
USP47-201ENST00000305481 INPP4BO15327 924 aa6.4□□□□□ -1.39
USP47-201ENST00000305481 TSPAN6O43657 245 aa6.4□□□□□ -1.39
USP47-201ENST00000305481 AP2A2O94973 939 aa6.4□□□□□ -1.39
USP47-201ENST00000305481 C8GP07360 202 aa6.4□□□□□ -1.39
USP47-201ENST00000305481 ENO2P09104 434 aaPredicted RBP6.4□□□□□ -1.39
USP47-201ENST00000305481 EBLN1P0CF75 366 aa6.4□□□□□ -1.39
USP47-201ENST00000305481 EPB42P16452 691 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms