RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 SLC7A8Q9UHI5 535 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 XKRYO14609 159 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 F7P08709 466 aaPredicted RBP13.73□□□□□ -0.21
PRKCB-201ENST00000303531 MTHFD1P11586 935 aaKnown RBP13.73□□□□□ -0.21
PRKCB-201ENST00000303531 ECT2LQ008S8 904 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 DLG1Q12959 904 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 IFI44LQ53G44 452 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 TLE6Q9H808 572 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 MAGEB3O15480 346 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 ALDH4A1P30038 563 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 HLA-DQB2P05538 268 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 PNLIPRP1P54315 467 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 TIGD5Q53EQ6 642 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 MSANTD2Q6P1R3 559 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 GPR135Q8IZ08 494 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 CMASQ8NFW8 434 aaPredicted RBP13.72□□□□□ -0.21
PRKCB-201ENST00000303531 ZNF384Q8TF68 577 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 SNX33Q8WV41 574 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 PIWIL1Q96J94 861 aaKnown RBP13.72□□□□□ -0.21
PRKCB-201ENST00000303531 C5orf34Q96MH7 638 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 MATN4O95460 622 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 LAPTM4BQ86VI4 370 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 TMC8Q8IU68 726 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 GJD3Q8N144 294 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 CDK15Q96Q40 435 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 PCDHGA11Q9Y5H2 935 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 RASGRP1O95267 797 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 IMPDH1P20839 514 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 IGFALSP35858 605 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 GMFBP60983 142 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 LRRC73Q5JTD7 316 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 FAM182AQ5T1J6 154 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 NTAN1Q96AB6 310 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 MTRRQ9UBK8 725 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 RUVBL1Q9Y265 456 aaKnown RBP13.72□□□□□ -0.21
PRKCB-201ENST00000303531 IRAK2O43187 625 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 HCN1O60741 890 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 GIMD1P0DJR0 217 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 ARF5P84085 180 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 HEPACAMQ14CZ8 416 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 PEX5LQ8IYB4 626 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 PIGKQ92643 395 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 CNPPD1Q9BV87 410 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 DNAJB9Q9UBS3 223 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 GADD45GO95257 159 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 MTMR14Q8NCE2 650 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 CEP295NLQ96MC4 621 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 MTERF1Q99551 399 aaKnown RBP13.72□□□□□ -0.21
PRKCB-201ENST00000303531 C1QTNF1Q9BXJ1 281 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 DUS2Q9NX74 493 aaKnown RBP13.72□□□□□ -0.21
PRKCB-201ENST00000303531 TLR6Q9Y2C9 796 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 H6PDO95479 791 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 ERVK-8P63133 956 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 PRR5P85299 388 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 PHC3Q8NDX5 983 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 TSEN15Q8WW01 171 aaKnown RBP13.72□□□□□ -0.21
PRKCB-201ENST00000303531 ING5Q8WYH8 240 aa13.72□□□□□ -0.21
PRKCB-201ENST00000303531 CPSF4LA6NMK7 179 aaKnown RBP13.71□□□□□ -0.21
PRKCB-201ENST00000303531 SEMG2Q02383 582 aa13.71□□□□□ -0.21
PRKCB-201ENST00000303531 UBXN11Q5T124 520 aa13.71□□□□□ -0.21
PRKCB-201ENST00000303531 PTTG2Q9NZH5 202 aa13.71□□□□□ -0.21
PRKCB-201ENST00000303531 RBM7Q9Y580 266 aaKnown RBP13.71□□□□□ -0.21
PRKCB-201ENST00000303531 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.71□□□□□ -0.21
PRKCB-201ENST00000303531 EI24O14681 340 aa13.71□□□□□ -0.21
PRKCB-201ENST00000303531 SUZ12Q15022 739 aaKnown RBP13.71□□□□□ -0.21
PRKCB-201ENST00000303531 FBXO22Q8NEZ5 403 aa13.71□□□□□ -0.21
PRKCB-201ENST00000303531 LRRC3Q9BY71 257 aa13.71□□□□□ -0.21
PRKCB-201ENST00000303531 GPN1Q9HCN4 374 aaPredicted RBP13.71□□□□□ -0.21
PRKCB-201ENST00000303531 PRKAB1Q9Y478 270 aa13.71□□□□□ -0.21
PRKCB-201ENST00000303531 PGRP06401 933 aa13.71□□□□□ -0.21
PRKCB-201ENST00000303531 USP30Q70CQ3 517 aa13.71□□□□□ -0.21
PRKCB-201ENST00000303531 RFKQ969G6 155 aa13.71□□□□□ -0.21
PRKCB-201ENST00000303531 PIGVQ9NUD9 493 aa13.71□□□□□ -0.21
PRKCB-201ENST00000303531 CLDN25C9JDP6 229 aa13.71□□□□□ -0.21
PRKCB-201ENST00000303531 M0R2N6 131 aa13.71□□□□□ -0.21
PRKCB-201ENST00000303531 SEPT4O43236 478 aa13.71□□□□□ -0.21
PRKCB-201ENST00000303531 GNAZP19086 355 aa13.71□□□□□ -0.21
PRKCB-201ENST00000303531 SLC7A1P30825 629 aa13.71□□□□□ -0.21
PRKCB-201ENST00000303531 TYSND1Q2T9J0 566 aa13.71□□□□□ -0.21
PRKCB-201ENST00000303531 PAQR3Q6TCH7 311 aa13.71□□□□□ -0.21
PRKCB-201ENST00000303531 OR5K1Q8NHB7 308 aa13.71□□□□□ -0.21
PRKCB-201ENST00000303531 NEK7Q8TDX7 302 aa13.71□□□□□ -0.21
PRKCB-201ENST00000303531 KCNS3Q9BQ31 491 aa13.71□□□□□ -0.21
PRKCB-201ENST00000303531 DUSP26Q9BV47 211 aa13.71□□□□□ -0.21
PRKCB-201ENST00000303531 DNAJC5Q9H3Z4 198 aa13.71□□□□□ -0.21
PRKCB-201ENST00000303531 EBF2Q9HAK2 575 aa13.71□□□□□ -0.21
PRKCB-201ENST00000303531 TRPV5Q9NQA5 729 aa13.71□□□□□ -0.21
PRKCB-201ENST00000303531 RBMX2Q9Y388 322 aaKnown RBP13.71□□□□□ -0.21
PRKCB-201ENST00000303531 A0A0G2JLL6 359 aaPredicted RBP13.71□□□□□ -0.22
PRKCB-201ENST00000303531 K7EPI3 171 aa13.71□□□□□ -0.22
PRKCB-201ENST00000303531 PIGRP01833 764 aa13.71□□□□□ -0.22
PRKCB-201ENST00000303531 GRB14Q14449 540 aa13.71□□□□□ -0.22
PRKCB-201ENST00000303531 SLC9A4Q6AI14 798 aa13.71□□□□□ -0.22
PRKCB-201ENST00000303531 OLFML1Q6UWY5 402 aa13.71□□□□□ -0.22
PRKCB-201ENST00000303531 FRRS1Q6ZNA5 592 aa13.71□□□□□ -0.22
PRKCB-201ENST00000303531 PRRT2Q7Z6L0 340 aaPredicted RBP13.71□□□□□ -0.22
PRKCB-201ENST00000303531 CLIP4Q8N3C7 705 aa13.71□□□□□ -0.22
PRKCB-201ENST00000303531 TOP1MTQ969P6 601 aa13.71□□□□□ -0.22
PRKCB-201ENST00000303531 SNX7Q9UNH6 387 aa13.71□□□□□ -0.22
PRKCB-201ENST00000303531 SCN1BQ07699 218 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms