RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 COQ10AQ96MF6 247 aa19.03■□□□□ 0.64
HOXC4-201ENST00000303406 CDK15Q96Q40 435 aa19.03■□□□□ 0.64
HOXC4-201ENST00000303406 HIST1H2AJQ99878 128 aa19.03■□□□□ 0.64
HOXC4-201ENST00000303406 H2AFJQ9BTM1 129 aa19.03■□□□□ 0.64
HOXC4-201ENST00000303406 MTG2Q9H4K7 406 aa19.03■□□□□ 0.64
HOXC4-201ENST00000303406 ASIC5Q9NY37 505 aa19.03■□□□□ 0.64
HOXC4-201ENST00000303406 MAP10Q9P2G4 905 aa19.03■□□□□ 0.64
HOXC4-201ENST00000303406 LRCH1Q9Y2L9 728 aa19.03■□□□□ 0.64
HOXC4-201ENST00000303406 FAM234BA2RU67 622 aa19.02■□□□□ 0.64
HOXC4-201ENST00000303406 PABPN1LA6NDY0 278 aaKnown RBP19.02■□□□□ 0.64
HOXC4-201ENST00000303406 FADS2P1A8MWK0 482 aa19.02■□□□□ 0.64
HOXC4-201ENST00000303406 WNT9AO14904 365 aa19.02■□□□□ 0.64
HOXC4-201ENST00000303406 LSM1O15116 133 aaKnown RBP19.02■□□□□ 0.64
HOXC4-201ENST00000303406 RGS14O43566 566 aa19.02■□□□□ 0.64
HOXC4-201ENST00000303406 PEX1O43933 1283 aa19.02■□□□□ 0.64
HOXC4-201ENST00000303406 EEDO75530 441 aaKnown RBP19.02■□□□□ 0.64
HOXC4-201ENST00000303406 SLCO2B1O94956 709 aa19.02■□□□□ 0.64
HOXC4-201ENST00000303406 NPPAP01160 153 aa19.02■□□□□ 0.64
HOXC4-201ENST00000303406 RPSAP08865 295 aaKnown RBP19.02■□□□□ 0.64
HOXC4-201ENST00000303406 FCARP24071 287 aa19.02■□□□□ 0.64
HOXC4-201ENST00000303406 SLC6A12P48065 614 aa19.02■□□□□ 0.64
HOXC4-201ENST00000303406 HTR6P50406 440 aa19.02■□□□□ 0.64
HOXC4-201ENST00000303406 ELAVL3Q14576 367 aaKnown RBP19.02■□□□□ 0.64
HOXC4-201ENST00000303406 FNDC3BQ53EP0 1204 aaKnown RBP19.02■□□□□ 0.64
HOXC4-201ENST00000303406 C9orf64Q5T6V5 341 aa19.02■□□□□ 0.64
HOXC4-201ENST00000303406 RNF111Q6ZNA4 994 aa19.02■□□□□ 0.64
HOXC4-201ENST00000303406 PRR23BQ6ZRT6 265 aa19.02■□□□□ 0.64
HOXC4-201ENST00000303406 TRIM46Q7Z4K8 759 aa19.02■□□□□ 0.64
HOXC4-201ENST00000303406 NLRP8Q86W28 1048 aa19.02■□□□□ 0.64
HOXC4-201ENST00000303406 FNDC5Q8NAU1 212 aa19.02■□□□□ 0.64
HOXC4-201ENST00000303406 GLMNQ92990 594 aa19.02■□□□□ 0.64
HOXC4-201ENST00000303406 DTD2Q96FN9 168 aa19.02■□□□□ 0.64
HOXC4-201ENST00000303406 PPP1R16AQ96I34 528 aa19.02■□□□□ 0.64
HOXC4-201ENST00000303406 EBF3Q9H4W6 596 aa19.02■□□□□ 0.64
HOXC4-201ENST00000303406 ARL15Q9NXU5 204 aa19.02■□□□□ 0.64
HOXC4-201ENST00000303406 CCL27Q9Y4X3 112 aa19.02■□□□□ 0.64
HOXC4-201ENST00000303406 C8BP07358 591 aa19.01■□□□□ 0.63
HOXC4-201ENST00000303406 ZFP36L2P47974 494 aaKnown RBP19.01■□□□□ 0.63
HOXC4-201ENST00000303406 SLC6A11P48066 632 aa19.01■□□□□ 0.63
HOXC4-201ENST00000303406 PRLHRP49683 370 aa19.01■□□□□ 0.63
HOXC4-201ENST00000303406 HSPA14Q0VDF9 509 aa19.01■□□□□ 0.63
HOXC4-201ENST00000303406 TMEM184AQ6ZMB5 413 aa19.01■□□□□ 0.63
HOXC4-201ENST00000303406 PQLC1Q8N2U9 271 aa19.01■□□□□ 0.63
HOXC4-201ENST00000303406 CPA6Q8N4T0 437 aa19.01■□□□□ 0.63
HOXC4-201ENST00000303406 BHLHE22Q8NFJ8 381 aaPredicted RBP19.01■□□□□ 0.63
HOXC4-201ENST00000303406 MCOLN3Q8TDD5 553 aa19.01■□□□□ 0.63
HOXC4-201ENST00000303406 UCMAQ8WVF2 138 aa19.01■□□□□ 0.63
HOXC4-201ENST00000303406 ELMO1Q92556 727 aa19.01■□□□□ 0.63
HOXC4-201ENST00000303406 USP7Q93009 1102 aa19.01■□□□□ 0.63
HOXC4-201ENST00000303406 AP2M1Q96CW1 435 aa19.01■□□□□ 0.63
HOXC4-201ENST00000303406 TMEM245Q9H330 911 aa19.01■□□□□ 0.63
HOXC4-201ENST00000303406 HPS4Q9NQG7 708 aa19.01■□□□□ 0.63
HOXC4-201ENST00000303406 BATF3Q9NR55 127 aa19.01■□□□□ 0.63
HOXC4-201ENST00000303406 LEF1Q9UJU2 399 aaPredicted RBP19.01■□□□□ 0.63
HOXC4-201ENST00000303406 PACSIN3Q9UKS6 424 aa19.01■□□□□ 0.63
HOXC4-201ENST00000303406 COL4A3Q01955 1670 aa19.01■□□□□ 0.63
HOXC4-201ENST00000303406 DENND4AQ7Z401 1863 aa19.01■□□□□ 0.63
HOXC4-201ENST00000303406 KPNA3O00505 521 aaPredicted RBP19■□□□□ 0.63
HOXC4-201ENST00000303406 AREL1O15033 823 aa19■□□□□ 0.63
HOXC4-201ENST00000303406 CLDN9O95484 217 aa19■□□□□ 0.63
HOXC4-201ENST00000303406 GSTM1P09488 218 aa19■□□□□ 0.63
HOXC4-201ENST00000303406 ARL1P40616 181 aaPredicted RBP19■□□□□ 0.63
HOXC4-201ENST00000303406 EIF2DP41214 584 aaKnown RBP19■□□□□ 0.63
HOXC4-201ENST00000303406 GSTM4Q03013 218 aa19■□□□□ 0.63
HOXC4-201ENST00000303406 NR6A1Q15406 480 aa19■□□□□ 0.63
HOXC4-201ENST00000303406 VPS26BQ4G0F5 336 aa19■□□□□ 0.63
HOXC4-201ENST00000303406 TMEM52BQ4KMG9 183 aa19■□□□□ 0.63
HOXC4-201ENST00000303406 DET1Q7L5Y6 550 aa19■□□□□ 0.63
HOXC4-201ENST00000303406 KLHDC8AQ8IYD2 350 aa19■□□□□ 0.63
HOXC4-201ENST00000303406 SNX31Q8N9S9 440 aa19■□□□□ 0.63
HOXC4-201ENST00000303406 TERB1Q8NA31 727 aa19■□□□□ 0.63
HOXC4-201ENST00000303406 HIPK4Q8NE63 616 aa19■□□□□ 0.63
HOXC4-201ENST00000303406 PIP4K2CQ8TBX8 421 aa19■□□□□ 0.63
HOXC4-201ENST00000303406 PPP2R3CQ969Q6 453 aa19■□□□□ 0.63
HOXC4-201ENST00000303406 MBD1Q9UIS9 605 aaPredicted RBP19■□□□□ 0.63
HOXC4-201ENST00000303406 SERTM1A2A2V5 107 aa19■□□□□ 0.63
HOXC4-201ENST00000303406 PRORSD1PA6NEY8 169 aa19■□□□□ 0.63
HOXC4-201ENST00000303406 NPIPB8E9PQR5 432 aa19■□□□□ 0.63
HOXC4-201ENST00000303406 FXYD1O00168 92 aa19■□□□□ 0.63
HOXC4-201ENST00000303406 LIN7AO14910 233 aaPredicted RBP19■□□□□ 0.63
HOXC4-201ENST00000303406 SPINT1O43278 529 aa19■□□□□ 0.63
HOXC4-201ENST00000303406 KRT6AP02538 564 aa19■□□□□ 0.63
HOXC4-201ENST00000303406 KRT6BP04259 564 aa19■□□□□ 0.63
HOXC4-201ENST00000303406 HSD17B1P14061 328 aa19■□□□□ 0.63
HOXC4-201ENST00000303406 KRT6CP48668 564 aa19■□□□□ 0.63
HOXC4-201ENST00000303406 CCR3P51677 355 aa19■□□□□ 0.63
HOXC4-201ENST00000303406 POLR2JP52435 117 aaKnown RBP19■□□□□ 0.63
HOXC4-201ENST00000303406 SLC7A2P52569 658 aa19■□□□□ 0.63
HOXC4-201ENST00000303406 NME5P56597 212 aa19■□□□□ 0.63
HOXC4-201ENST00000303406 FCHO2Q0JRZ9 810 aa19■□□□□ 0.63
HOXC4-201ENST00000303406 PRKG2Q13237 762 aa19■□□□□ 0.63
HOXC4-201ENST00000303406 BOP1Q14137 746 aaKnown RBP19■□□□□ 0.63
HOXC4-201ENST00000303406 ABRAXAS2Q15018 415 aa19■□□□□ 0.63
HOXC4-201ENST00000303406 ACOX1Q15067 660 aa19■□□□□ 0.63
HOXC4-201ENST00000303406 SHHQ15465 462 aa19■□□□□ 0.63
HOXC4-201ENST00000303406 RARS2Q5T160 578 aaKnown RBP19■□□□□ 0.63
HOXC4-201ENST00000303406 SCIMPQ6UWF3 145 aa19■□□□□ 0.63
HOXC4-201ENST00000303406 SERPINA13PQ6UXR4 307 aa19■□□□□ 0.63
HOXC4-201ENST00000303406 ZFAND4Q86XD8 727 aa19■□□□□ 0.63
HOXC4-201ENST00000303406 DPP10Q8N608 796 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms