RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 SLC29A4Q7RTT9 530 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 PRELID2Q8N945 189 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 OR6K6Q8NGW6 343 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 RUBCNQ92622 972 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 C1GALT1C1Q96EU7 318 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 HIST1H2AAQ96QV6 131 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 ZNF358Q9NW07 568 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 MOCS1Q9NZB8 636 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 TLL2Q9Y6L7 1015 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 STX16-NPEPL1H3BU86 382 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 STX16O14662 325 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 PLD2O14939 933 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 CH25HO95992 272 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 WARSP23381 471 aaKnown RBP7.68□□□□□ -1.18
SCN9A-201ENST00000303354 CLCQ05315 142 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 LDLRAP1Q5SW96 308 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 CYP2U1Q7Z449 544 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 IRF2BP2Q7Z5L9 587 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 GPAT4Q86UL3 456 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 PLD5Q8N7P1 536 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 PLD4Q96BZ4 506 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 KLHDC7BQ96G42 594 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 SLC25A23Q9BV35 468 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 TBL1XR1Q9BZK7 514 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 MTG2Q9H4K7 406 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 GDF3Q9NR23 364 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 MIOSQ9NXC5 875 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 MALT1Q9UDY8 824 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 DKKL1Q9UK85 242 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 FEZF1A0PJY2 475 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 MATN3O15232 486 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 SSNA1O43805 119 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 POP7O75817 140 aaKnown RBP7.68□□□□□ -1.18
SCN9A-201ENST00000303354 WFS1O76024 890 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 FHP07954 510 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 TMED10P49755 219 aaKnown RBP7.68□□□□□ -1.18
SCN9A-201ENST00000303354 PGGT1BP53609 377 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 SVOPQ8N4V2 548 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 OR2L3Q8NG85 312 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 RHBDD1Q8TEB9 315 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 RLN3Q8WXF3 142 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 SLC22A14Q9Y267 594 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 INSL5Q9Y5Q6 135 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 ERI3O43414 337 aaKnown RBP7.67□□□□□ -1.18
SCN9A-201ENST00000303354 LRCH4O75427 683 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 RECQL5O94762 991 aaPredicted RBP7.67□□□□□ -1.18
SCN9A-201ENST00000303354 ZNF823P16415 610 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 ASPAP45381 313 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 OLR1P78380 273 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 HMGCS1Q01581 520 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 PPP1R8Q12972 351 aaKnown RBP7.67□□□□□ -1.18
SCN9A-201ENST00000303354 C15orf52Q6ZUT6 534 aaKnown RBP7.67□□□□□ -1.18
SCN9A-201ENST00000303354 RTL3Q8N8U3 475 aaKnown RBP7.67□□□□□ -1.18
SCN9A-201ENST00000303354 OR4K17Q8NGC6 315 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 NIFKQ9BYG3 293 aaKnown RBP7.67□□□□□ -1.18
SCN9A-201ENST00000303354 GPR62Q9BZJ7 368 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 LOC100509620A0A075B734 347 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 SNAI1O95863 264 aaPredicted RBP7.67□□□□□ -1.18
SCN9A-201ENST00000303354 MAOBP27338 520 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 POLR2JP52435 117 aaKnown RBP7.67□□□□□ -1.18
SCN9A-201ENST00000303354 FIGNQ5HY92 759 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 GKN2Q86XP6 184 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 PHF11Q9UIL8 331 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 AJAP1Q9UKB5 411 aaPredicted RBP7.67□□□□□ -1.18
SCN9A-201ENST00000303354 ZNF726A6NNF4 738 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 TTC34A8MYJ7 566 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 PIP5K1BO14986 540 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 SLBPQ14493 270 aaKnown RBP eCLIP7.67□□□□□ -1.18
SCN9A-201ENST00000303354 DEFB110Q30KQ9 67 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 MAPK15Q8TD08 544 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 MSLNLQ96KJ4 702 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 LENG8Q96PV6 779 aaPredicted RBP7.67□□□□□ -1.18
SCN9A-201ENST00000303354 TTYH2Q9BSA4 534 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 ZNF395Q9H8N7 513 aaPredicted RBP7.67□□□□□ -1.18
SCN9A-201ENST00000303354 OR6C74A6NCV1 312 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 CTSKP43235 329 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 OGDHQ02218 1023 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 GPR107Q5VW38 600 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 GLYATQ6IB77 296 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 TXNDC11Q6PKC3 985 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 PHOSPHO1Q8TCT1 267 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 OR1A2Q9Y585 309 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 NEMP2A6NFY4 417 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 PIK3C3Q8NEB9 887 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 PIWIL1Q96J94 861 aaKnown RBP7.67□□□□□ -1.18
SCN9A-201ENST00000303354 CNDP2Q96KP4 475 aaKnown RBP7.67□□□□□ -1.18
SCN9A-201ENST00000303354 RPS6KA6Q9UK32 745 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 SLIT1O75093 1534 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 TCRBV7S3A2A0A539 114 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 CCDC162PA2VCL2 907 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 CASKO14936 926 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 TULP3O75386 442 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 TNFRSF21O75509 655 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 HLA-DQB2P05538 268 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 PSMD4P55036 377 aaKnown RBP7.67□□□□□ -1.18
SCN9A-201ENST00000303354 MTPNP58546 118 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 CD47Q08722 323 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 ECH1Q13011 328 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 SIRPB2Q5JXA9 342 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 KYAT3Q6YP21 454 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms