RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 CD9P21926 228 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 MRPL19P49406 292 aaKnown RBP12.66□□□□□ -0.38
HIF3A-204ENST00000300862 PSMD7P51665 324 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 NFATC2Q13469 925 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 ZBED5Q49AG3 693 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 GTDC1Q4AE62 458 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 TMEM150AQ86TG1 271 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 TSPAN33Q86UF1 283 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 PAPD5Q8NDF8 572 aaKnown RBP12.66□□□□□ -0.38
HIF3A-204ENST00000300862 OR10A6Q8NH74 314 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 ZNF461Q8TAF7 563 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 FBXO30Q8TB52 745 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 ITFG1Q8TB96 612 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 THUMPD3Q9BV44 507 aaKnown RBP12.66□□□□□ -0.38
HIF3A-204ENST00000300862 SEZ6LQ9BYH1 1024 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 MAGEE1Q9HCI5 957 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 LATS2Q9NRM7 1088 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 WWOXQ9NZC7 414 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 AFF4Q9UHB7 1163 aaKnown RBP12.66□□□□□ -0.38
HIF3A-204ENST00000300862 PTBP2Q9UKA9 531 aaKnown RBP12.66□□□□□ -0.38
HIF3A-204ENST00000300862 CDH7Q9ULB5 785 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 CCL27Q9Y4X3 112 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 TNPO3Q9Y5L0 923 aaKnown RBP12.66□□□□□ -0.38
HIF3A-204ENST00000300862 NUP214P35658 2090 aaPredicted RBP12.66□□□□□ -0.38
HIF3A-204ENST00000300862 PLXNA4Q9HCM2 1894 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 ELK4P28324 431 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 HNF1BP35680 557 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 CCR3P51677 355 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 MAPK10P53779 464 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 PMS2P3Q13401 168 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 LAPTM5Q13571 262 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 CHRNA6Q15825 494 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 ANKRD34AQ69YU3 496 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 ENPP6Q6UWR7 440 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 DNAJB7Q7Z6W7 309 aaPredicted RBP12.66□□□□□ -0.38
HIF3A-204ENST00000300862 PROSER1Q86XN7 944 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 HS3ST5Q8IZT8 346 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 DPP10Q8N608 796 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 ADAMTS19Q8TE59 1207 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 ZNF583Q96ND8 569 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 MUC13Q9H3R2 512 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.66□□□□□ -0.38
HIF3A-204ENST00000300862 PCDHB3Q9Y5E6 796 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 PCDHB1Q9Y5F3 818 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 CASP8AP2Q9UKL3 1982 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 SCN5AQ14524 2016 aa12.65□□□□□ -0.38
HIF3A-204ENST00000300862 KRT87PA6NCN2 255 aa12.65□□□□□ -0.38
HIF3A-204ENST00000300862 LOC730098B7Z3J9 87 aa12.65□□□□□ -0.38
HIF3A-204ENST00000300862 H0Y858 1186 aa12.65□□□□□ -0.38
HIF3A-204ENST00000300862 PRRG1O14668 218 aa12.65□□□□□ -0.38
HIF3A-204ENST00000300862 UMPSP11172 480 aa12.65□□□□□ -0.38
HIF3A-204ENST00000300862 PORP16435 677 aaPredicted RBP12.65□□□□□ -0.38
HIF3A-204ENST00000300862 BPIP17213 487 aa12.65□□□□□ -0.38
HIF3A-204ENST00000300862 ESRRGP62508 458 aa12.65□□□□□ -0.38
HIF3A-204ENST00000300862 NEDD8Q15843 81 aa12.65□□□□□ -0.38
HIF3A-204ENST00000300862 INO80DQ53TQ3 878 aaPredicted RBP12.65□□□□□ -0.38
HIF3A-204ENST00000300862 SPANXN4Q5MJ08 99 aa12.65□□□□□ -0.38
HIF3A-204ENST00000300862 FAM117BQ6P1L5 589 aa12.65□□□□□ -0.38
HIF3A-204ENST00000300862 ABRAXAS1Q6UWZ7 409 aa12.65□□□□□ -0.38
HIF3A-204ENST00000300862 ITIH5Q86UX2 942 aa12.65□□□□□ -0.38
HIF3A-204ENST00000300862 STK32CQ86UX6 486 aa12.65□□□□□ -0.38
HIF3A-204ENST00000300862 ZSWIM9Q86XI8 627 aa12.65□□□□□ -0.38
HIF3A-204ENST00000300862 RIMKLAQ8IXN7 391 aa12.65□□□□□ -0.38
HIF3A-204ENST00000300862 RNF168Q8IYW5 571 aaPredicted RBP12.65□□□□□ -0.38
HIF3A-204ENST00000300862 TNIP2Q8NFZ5 429 aa12.65□□□□□ -0.38
HIF3A-204ENST00000300862 BPIFB1Q8TDL5 484 aa12.65□□□□□ -0.38
HIF3A-204ENST00000300862 TMBIM1Q969X1 311 aa12.65□□□□□ -0.38
HIF3A-204ENST00000300862 ALG14Q96F25 216 aa12.65□□□□□ -0.38
HIF3A-204ENST00000300862 PDLIM5Q96HC4 596 aaKnown RBP12.65□□□□□ -0.38
HIF3A-204ENST00000300862 MUS81Q96NY9 551 aa12.65□□□□□ -0.38
HIF3A-204ENST00000300862 TMEM175Q9BSA9 504 aa12.65□□□□□ -0.38
HIF3A-204ENST00000300862 NPLQ9BXD5 320 aaPredicted RBP12.65□□□□□ -0.38
HIF3A-204ENST00000300862 MRPL9Q9BYD2 267 aaKnown RBP12.65□□□□□ -0.38
HIF3A-204ENST00000300862 FAM126AQ9BYI3 521 aaPredicted RBP12.65□□□□□ -0.38
HIF3A-204ENST00000300862 POLR1BQ9H9Y6 1135 aa12.65□□□□□ -0.38
HIF3A-204ENST00000300862 CRLS1Q9UJA2 301 aa12.65□□□□□ -0.38
HIF3A-204ENST00000300862 ZNF701M0R085 212 aaPredicted RBP12.65□□□□□ -0.39
HIF3A-204ENST00000300862 UPK1AO00322 258 aa12.65□□□□□ -0.39
HIF3A-204ENST00000300862 B3GALT4O96024 378 aa12.65□□□□□ -0.39
HIF3A-204ENST00000300862 CD247P20963 164 aa12.65□□□□□ -0.39
HIF3A-204ENST00000300862 FUT4P22083 530 aa12.65□□□□□ -0.39
HIF3A-204ENST00000300862 PHEXP78562 749 aa12.65□□□□□ -0.39
HIF3A-204ENST00000300862 PWP1Q13610 501 aa12.65□□□□□ -0.39
HIF3A-204ENST00000300862 ARHGEF7Q14155 803 aa12.65□□□□□ -0.39
HIF3A-204ENST00000300862 NKG7Q16617 165 aa12.65□□□□□ -0.39
HIF3A-204ENST00000300862 SPATS1Q496A3 300 aa12.65□□□□□ -0.39
HIF3A-204ENST00000300862 SPOUT1Q5T280 376 aaKnown RBP12.65□□□□□ -0.39
HIF3A-204ENST00000300862 GPR107Q5VW38 600 aa12.65□□□□□ -0.39
HIF3A-204ENST00000300862 RFLNAQ6ZTI6 216 aa12.65□□□□□ -0.39
HIF3A-204ENST00000300862 TPGS1Q6ZTW0 290 aa12.65□□□□□ -0.39
HIF3A-204ENST00000300862 PHACTR4Q8IZ21 702 aa12.65□□□□□ -0.39
HIF3A-204ENST00000300862 RBFAQ8N0V3 343 aa12.65□□□□□ -0.39
HIF3A-204ENST00000300862 LIX1Q8N485 282 aa12.65□□□□□ -0.39
HIF3A-204ENST00000300862 PDPRQ8NCN5 879 aa12.65□□□□□ -0.39
HIF3A-204ENST00000300862 OR10Q1Q8NGQ4 319 aa12.65□□□□□ -0.39
HIF3A-204ENST00000300862 OSCP1Q8WVF1 389 aa12.65□□□□□ -0.39
HIF3A-204ENST00000300862 SLC13A3Q8WWT9 602 aa12.65□□□□□ -0.39
HIF3A-204ENST00000300862 OVCA2Q8WZ82 227 aa12.65□□□□□ -0.39
HIF3A-204ENST00000300862 BDH2Q9BUT1 245 aa12.65□□□□□ -0.39
HIF3A-204ENST00000300862 NAA50Q9GZZ1 169 aaKnown RBP12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms