RNA–Protein interactions for RNA: ENST00000297668.10

CNTNAP3-201, Transcript of contactin associated protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP3, Length 5,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-201ENST00000297668 POMZP3Q6PJE2 187 aa16.55■□□□□ 0.24
CNTNAP3-201ENST00000297668 TUBA1AQ71U36 451 aa16.55■□□□□ 0.24
CNTNAP3-201ENST00000297668 RAB2BQ8WUD1 216 aa16.55■□□□□ 0.24
CNTNAP3-201ENST00000297668 NTAN1Q96AB6 310 aa16.55■□□□□ 0.24
CNTNAP3-201ENST00000297668 ENPP3O14638 875 aa16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 CCL16O15467 120 aa16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 RGS20O76081 388 aa16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 EFNA1P20827 205 aaPredicted RBP16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 CMPK1P30085 196 aa16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 DPY19L1Q2PZI1 675 aa16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 TNFAIP8L3Q5GJ75 292 aa16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 LRP10Q7Z4F1 713 aa16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 TOP1MTQ969P6 601 aa16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 SMPD1P17405 629 aa16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 ALDH4A1P30038 563 aa16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 SLC7A1P30825 629 aa16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 TMEM198Q66K66 360 aa16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 CPA6Q8N4T0 437 aa16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 PLD4Q96BZ4 506 aa16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 CNTN3Q9P232 1028 aa16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 FBXO9Q9UK97 447 aaPredicted RBP16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 LGR5O75473 907 aa16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 RYKP34925 604 aa16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 RABGGTBP53611 331 aa16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 ERVK-8P63133 956 aa16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 MXD1Q05195 221 aa16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 NDUFA9Q16795 377 aa16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 TMEM220Q6QAJ8 160 aa16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 USP30Q70CQ3 517 aa16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 TMEM110Q86TL2 294 aa16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 ARL14EPQ8N8R7 260 aaPredicted RBP16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 LRRC3Q9BY71 257 aa16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 PCDHAC1Q9H158 963 aa16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 SP140LQ9H930 580 aa16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 IL1RAPQ9NPH3 570 aa16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 OSER1Q9NX31 292 aa16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 AQP12BA6NM10 295 aa16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 USP2O75604 605 aaPredicted RBP16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 SNX4O95219 450 aa16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 AQP12AQ8IXF9 295 aa16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 C8orf48Q96LL4 319 aa16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 HAPLN3Q96S86 360 aa16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 COPS4Q9BT78 406 aa16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 OXSMQ9NWU1 459 aa16.54■□□□□ 0.24
CNTNAP3-201ENST00000297668 A0A1W2PRG6 482 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 CPSF4LA6NMK7 179 aaKnown RBP16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 GADD45GO95257 159 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 IRF9Q00978 393 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 KLF1Q13351 362 aaPredicted RBP16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 MADCAM1Q13477 382 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 SNAP47Q5SQN1 464 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 DNAJB8Q8NHS0 232 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 GPER1Q99527 375 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 FBXW2Q9UKT8 454 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 K7EPI3 171 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 NOS1APO75052 506 aaPredicted RBP16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 IL1R2P27930 398 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 LCN1P1Q5VSP4 162 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 THOC7Q6I9Y2 204 aaKnown RBP16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 CHADLQ6NUI6 762 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 SNX20Q7Z614 316 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 TLE6Q9H808 572 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 ERVW-1Q9UQF0 538 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 FAM172BPA6NC97 362 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 ZNF536O15090 1300 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 IRAK2O43187 625 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 MATN4O95460 622 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 SLC35G6P0C7Q6 338 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 IMPDH1P20839 514 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 OGFOD2Q6N063 350 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 PGBD2Q6P3X8 592 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 OR5K1Q8NHB7 308 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 OR14C36Q8NHC7 312 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 KBTBD7Q8WVZ9 684 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 CEP295NLQ96MC4 621 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 C11orf16Q9NQ32 467 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 POLR3BQ9NW08 1133 aaPredicted RBP16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 DNAJB4Q9UDY4 337 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 ZNF879B4DU55 563 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 CLDN4O14493 209 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 EI24O14681 340 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 LDOC1O95751 146 aaPredicted RBP16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 PGRP06401 933 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 AKT2P31751 481 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 AKR1D1P51857 326 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 HERVK_113P63132 956 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 HERC3Q15034 1050 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 SOWAHAQ2M3V2 549 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 MSANTD2Q6P1R3 559 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 FRRS1Q6ZNA5 592 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 ZNF516Q92618 1163 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 FUBP3Q96I24 572 aaKnown RBP eCLIP16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 RPL10LQ96L21 214 aaKnown RBP16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 DUSP26Q9BV47 211 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 ERVK-6Q9BXR3 956 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 WDR37Q9Y2I8 494 aa16.53■□□□□ 0.24
CNTNAP3-201ENST00000297668 NOBOXO60393 691 aa16.52■□□□□ 0.24
CNTNAP3-201ENST00000297668 TBX10O75333 385 aa16.52■□□□□ 0.24
CNTNAP3-201ENST00000297668 PCCBP05166 539 aa16.52■□□□□ 0.24
CNTNAP3-201ENST00000297668 DCAKDQ8WVC6 231 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms