RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 H3BNX3 289 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 BCAS2O75934 225 aaPredicted RBP9.13□□□□□ -0.95
PRDM9-201ENST00000296682 B3GALT4O96024 378 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 HSPA1AP0DMV8 641 aaKnown RBP9.13□□□□□ -0.95
PRDM9-201ENST00000296682 HSPA1BP0DMV9 641 aaKnown RBP9.13□□□□□ -0.95
PRDM9-201ENST00000296682 GPX3P22352 226 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 FASP25445 335 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 GSK3BP49841 420 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 LRP8Q14114 963 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 PTCHD3Q3KNS1 767 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 GTDC1Q4AE62 458 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 CARD16Q5EG05 197 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 SPANXN4Q5MJ08 99 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 GPRC6AQ5T6X5 926 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 CACHD1Q5VU97 1274 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 CYP20A1Q6UW02 462 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 CERS6Q6ZMG9 384 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 CHSY3Q70JA7 882 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 CHST15Q7LFX5 561 aaPredicted RBP9.13□□□□□ -0.95
PRDM9-201ENST00000296682 GALNT10Q86SR1 603 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 NXPE1Q8N323 547 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 SFRP1Q8N474 314 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 FAM47BQ8NA70 645 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 NSMCE2Q96MF7 247 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 CCDC90BQ9GZT6 254 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 SPATS2LQ9NUQ6 558 aaKnown RBP9.13□□□□□ -0.95
PRDM9-201ENST00000296682 A0A1B0GTW7 788 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 GNG14A0A1W2PPG7 69 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 GRM6O15303 877 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 FKBP9O95302 570 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 POP4O95707 220 aaKnown RBP9.12□□□□□ -0.95
PRDM9-201ENST00000296682 SUOXP51687 545 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 CHN2P52757 468 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 IRX1P78414 480 aaPredicted RBP9.12□□□□□ -0.95
PRDM9-201ENST00000296682 CDKL1Q00532 357 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 MTA1Q13330 715 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 LAPTM4AQ15012 233 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 XKR6Q5GH73 641 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 GLYATQ6IB77 296 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 CYHR1Q6ZMK1 362 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 FKBP9P1Q75LS8 142 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 ADCK2Q7Z695 626 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 RHEBL1Q8TAI7 183 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 MCOLN3Q8TDD5 553 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 ADAMTS19Q8TE59 1207 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 DLG3Q92796 817 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 SH3KBP1Q96B97 665 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 ASB9Q96DX5 294 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 L3HYPDHQ96EM0 354 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 DUS3LQ96G46 650 aaKnown RBP9.12□□□□□ -0.95
PRDM9-201ENST00000296682 MAGEE1Q9HCI5 957 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 C6orf203Q9P0P8 240 aaPredicted RBP9.12□□□□□ -0.95
PRDM9-201ENST00000296682 ZNF225Q9UK10 706 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 OAS3Q9Y6K5 1087 aaKnown RBP9.12□□□□□ -0.95
PRDM9-201ENST00000296682 PCDH8O95206 1070 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 ELFN1P0C7U0 828 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 CD9P21926 228 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 OXTRP30559 389 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 YAP1P46937 504 aaKnown RBP9.12□□□□□ -0.95
PRDM9-201ENST00000296682 IST1P53990 364 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 XIAPP98170 497 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 GRIN2CQ14957 1233 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 TYSND1Q2T9J0 566 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 ASTLQ6HA08 431 aaPredicted RBP9.12□□□□□ -0.95
PRDM9-201ENST00000296682 ZFP1Q6P2D0 407 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 TXNDC11Q6PKC3 985 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 CFAP206Q8IYR0 622 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 GPR150Q8NGU9 434 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 IRF7Q92985 503 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 AP2M1Q96CW1 435 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 EGLN2Q96KS0 407 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 TRIM15Q9C019 465 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 ING2Q9H160 280 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 OSGEPL1Q9H4B0 414 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 DYRK4Q9NR20 520 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 CMTM6Q9NX76 183 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 LEF1Q9UJU2 399 aaPredicted RBP9.12□□□□□ -0.95
PRDM9-201ENST00000296682 CNOT6Q9ULM6 557 aaKnown RBP9.12□□□□□ -0.95
PRDM9-201ENST00000296682 TNPO3Q9Y5L0 923 aaKnown RBP9.12□□□□□ -0.95
PRDM9-201ENST00000296682 SCN5AQ14524 2016 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 MICAL3Q7RTP6 2002 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 RGS14O43566 566 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 DFNA5O60443 496 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 FAM58BPP0C7Q3 252 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 MYCLP1P12525 358 aaPredicted RBP9.12□□□□□ -0.95
PRDM9-201ENST00000296682 PTPN2P17706 415 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 LHCGRP22888 699 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 MEF2AQ02078 507 aaPredicted RBP9.12□□□□□ -0.95
PRDM9-201ENST00000296682 CHIT1Q13231 466 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 UGT3A2Q3SY77 523 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 TCEAL5Q5H9L2 206 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 RAET1GQ6H3X3 334 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 TTC33Q6PID6 262 aaPredicted RBP9.12□□□□□ -0.95
PRDM9-201ENST00000296682 KLHDC10Q6PID8 442 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 GDPD4Q6W3E5 623 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 TPRG1Q6ZUI0 275 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 VRK3Q8IV63 474 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 PELI3Q8N2H9 469 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 OR2T34Q8NGX1 318 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 OR2T3Q8NH03 318 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms