RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 BLMHQ13867 455 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 RASGEF1CQ8N431 466 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 HEXDCQ8WVB3 486 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 SHC3Q92529 594 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 HSFY1Q96LI6 401 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 MFSD14AQ96MC6 490 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 EBF4Q9BQW3 602 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 GRIN2DO15399 1336 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 MEN1O00255 615 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 TGFB1I1O43294 461 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 PPM1AP35813 382 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 S100A12P80511 92 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 CHAF1BQ13112 559 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 TARDBPQ13148 414 aaKnown RBP eCLIP15.9■□□□□ 0.14
SSRP1-202ENST00000293880 PUM1Q14671 1186 aaKnown RBP eCLIP15.9■□□□□ 0.148e-8■■□□□ 12.4
SSRP1-202ENST00000293880 ALG1LQ6GMV1 187 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 IFT27Q9BW83 186 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 SAV1Q9H4B6 383 aaPredicted RBP15.9■□□□□ 0.14
SSRP1-202ENST00000293880 PRDM16Q9HAZ2 1276 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 KLRG2A4D1S0 409 aaPredicted RBP15.9■□□□□ 0.14
SSRP1-202ENST00000293880 CACNB4O00305 520 aaPredicted RBP15.9■□□□□ 0.14
SSRP1-202ENST00000293880 IFNW1P05000 195 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 CHRNA4P43681 627 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 OAZ1P54368 228 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 CHST9Q7L1S5 443 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 A0A0G2JN53 185 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 H3BNH8 94 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 GADD45GO95257 159 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 NDUFV1P49821 464 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 PPP3R1P63098 170 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 GNA12Q03113 381 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 CACNG1Q06432 222 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 BATFQ16520 125 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 MPP5Q8N3R9 675 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 PIK3R3Q92569 461 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 COQ8BQ96D53 544 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 CCDC85CA6NKD9 419 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 PRAMEF1O95521 474 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 ODF4Q2M2E3 257 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 RAB11FIP2Q7L804 512 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 ZDHHC21Q8IVQ6 265 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 HSPBAP1Q96EW2 488 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 MAGEE1Q9HCI5 957 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 HMX1Q9NP08 348 aaPredicted RBP15.9■□□□□ 0.14
SSRP1-202ENST00000293880 KCTD5Q9NXV2 234 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 KIAA1522Q9P206 1035 aaPredicted RBP15.9■□□□□ 0.14
SSRP1-202ENST00000293880 PDPK1O15530 556 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 ITM2AO43736 263 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 SSX5O60225 188 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 ELP6Q0PNE2 266 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 ADGRE1Q14246 886 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 SCGB2B2Q4G0G5 96 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 PTF1AQ7RTS3 328 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 LAPTM4BQ86VI4 370 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 OR5AK3PQ8NH89 298 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 KLK6Q92876 244 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 STOX2Q9P2F5 926 aaPredicted RBP15.89■□□□□ 0.13
SSRP1-202ENST00000293880 IFT80Q9P2H3 777 aaPredicted RBP15.89■□□□□ 0.13
SSRP1-202ENST00000293880 SLIT1O75093 1534 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 CREB1P16220 341 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 GJA1P17302 382 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 FSTL4Q6MZW2 842 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 MON1BQ7L1V2 547 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 ZNF567Q8N184 647 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 PARPBPQ9NWS1 579 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 MAGEB17A8MXT2 336 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 RORCP51449 518 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 LACTB2Q53H82 288 aaPredicted RBP15.89■□□□□ 0.13
SSRP1-202ENST00000293880 KLHL35Q6PF15 583 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 ZNF782Q6ZMW2 699 aaPredicted RBP15.89■□□□□ 0.13
SSRP1-202ENST00000293880 LRRC70Q7Z2Q7 622 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 TMPRSS9Q7Z410 1059 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 ZNF280BQ86YH2 543 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 SOCS4Q8WXH5 440 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 RIPOR3Q96MK2 946 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 MND1Q9BWT6 205 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 COMMD4Q9H0A8 199 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 DCCP43146 1447 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 GRM6O15303 877 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 ACVR2AP27037 513 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 BSNDQ8WZ55 320 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 CERS4Q9HA82 394 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 KMOO15229 486 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 CXCL14O95715 111 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 PPIBP23284 216 aaKnown RBP15.89■□□□□ 0.13
SSRP1-202ENST00000293880 RPIAP49247 311 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 CDH15P55291 814 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 TAF10Q12962 218 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 PRAMEF17Q5VTA0 474 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 TNFAIP8L2Q6P589 184 aaPredicted RBP15.89■□□□□ 0.13
SSRP1-202ENST00000293880 ADGRD1Q6QNK2 874 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 DNAJA4Q8WW22 397 aaPredicted RBP15.89■□□□□ 0.13
SSRP1-202ENST00000293880 INPP4AQ96PE3 977 aaPredicted RBP15.89■□□□□ 0.13
SSRP1-202ENST00000293880 FAM105AQ9NUU6 356 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 PCDHGC4Q9Y5F7 938 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 UBIAD1Q9Y5Z9 338 aa15.89■□□□□ 0.13
SSRP1-202ENST00000293880 PDLIM1O00151 329 aa15.88■□□□□ 0.13
SSRP1-202ENST00000293880 CST3P01034 146 aaPredicted RBP15.88■□□□□ 0.13
SSRP1-202ENST00000293880 PKMP14618 531 aaKnown RBP15.88■□□□□ 0.13
SSRP1-202ENST00000293880 SPAM1P38567 509 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms