RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 CDH22Q9UJ99 828 aa17.02■□□□□ 0.31
SHANK1-201ENST00000293441 CFAP20Q9Y6A4 193 aaKnown RBP17.02■□□□□ 0.31
SHANK1-201ENST00000293441 ZNF536O15090 1300 aa17.02■□□□□ 0.31
SHANK1-201ENST00000293441 hCG_2039718K7EN88 272 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 PPEF2O14830 753 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 PRODHO43272 600 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 NCBP2P52298 156 aaKnown RBP eCLIP17.01■□□□□ 0.31
SHANK1-201ENST00000293441 DPYSQ14117 519 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 LPGAT1Q92604 370 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 GTPBP3Q969Y2 492 aaKnown RBP17.01■□□□□ 0.31
SHANK1-201ENST00000293441 RAB11FIP5Q9BXF6 653 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 IGSF9Q9P2J2 1179 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 SALL4Q9UJQ4 1053 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 KERAO60938 352 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 LYNP07948 512 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 MNDAP41218 407 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 MYBPC3Q14896 1274 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 SPOCK2Q92563 424 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 C11orf16Q9NQ32 467 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 CALML5Q9NZT1 146 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 WNT6Q9Y6F9 365 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 IL7RP16871 459 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 NR1H2P55055 460 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 GRM2Q14416 872 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 SMARCD3Q6STE5 483 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 PQLC1Q8N2U9 271 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 OR10A6Q8NH74 314 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 TESMINQ9Y4I5 508 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 DNASE1L1P49184 302 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 CCR8P51685 355 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 CLCN7P51798 805 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 ARF5P84085 180 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 DPYSL2Q16555 572 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 Q6ZVU0 165 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 NTPCRQ9BSD7 190 aaKnown RBP17.01■□□□□ 0.31
SHANK1-201ENST00000293441 YTHDF3Q7Z739 585 aaKnown RBP17.01■□□□□ 0.31
SHANK1-201ENST00000293441 FAM47BQ8NA70 645 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 FAM46DQ8NEK8 389 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 OSBPL2Q9H1P3 480 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 PLEKHA1Q9HB21 404 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 DMAC2Q9NW81 257 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 CNTN3Q9P232 1028 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 TMEM150CB9EJG8 249 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 UNGP13051 313 aaPredicted RBP17.01■□□□□ 0.31
SHANK1-201ENST00000293441 NCK1P16333 377 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 KHKP50053 298 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 IRF9Q00978 393 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 PUS10Q3MIT2 529 aaKnown RBP17.01■□□□□ 0.31
SHANK1-201ENST00000293441 ACDQ96AP0 544 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 PRICKLE1Q96MT3 831 aaPredicted RBP17.01■□□□□ 0.31
SHANK1-201ENST00000293441 CDK15Q96Q40 435 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 DHRS7Q9Y394 339 aa17.01■□□□□ 0.31
SHANK1-201ENST00000293441 POU2F1P14859 743 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 POU5F1Q01860 360 aaKnown RBP17■□□□□ 0.31
SHANK1-201ENST00000293441 ZCCHC12Q6PEW1 402 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 ABHD13Q7L211 337 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 LRRC57Q8N9N7 239 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 MINDY3Q9H8M7 445 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 ANKHQ9HCJ1 492 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 TXNRD2Q9NNW7 524 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 EIF2B3Q9NR50 452 aaKnown RBP17■□□□□ 0.31
SHANK1-201ENST00000293441 C1orf109Q9NX04 203 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 RAPGEFL1Q9UHV5 662 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 CHST10O43529 356 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 CDH12P55289 794 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 TAS2R50P59544 299 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 HKDC1Q2TB90 917 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 SH3D19Q5HYK7 790 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 LEMD2Q8NC56 503 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 PIGUQ9H490 435 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 A0A0U1RQF3 1178 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 ZNF846Q147U1 533 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 SIRPB2Q5JXA9 342 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 FAM131AQ6UXB0 335 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 FAXDC2Q96IV6 333 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 CLCC1Q96S66 551 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 MCCC2Q9HCC0 563 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 FBXL12Q9NXK8 326 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 SERPINA1P01009 418 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 TGFBR2P37173 567 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 NFKB2Q00653 900 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 TRAP1Q12931 704 aaKnown RBP17■□□□□ 0.31
SHANK1-201ENST00000293441 RGS21Q2M5E4 152 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 GFOD2Q3B7J2 385 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 FBXL22Q6P050 247 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 OMA1Q96E52 524 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 SHDQ96IW2 340 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 SMG9Q9H0W8 520 aaKnown RBP17■□□□□ 0.31
SHANK1-201ENST00000293441 S100A14Q9HCY8 104 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 Q9Y3F1 56 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 GSC2O15499 205 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 FGF18O76093 207 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 PRKAR1AP10644 381 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 GNALP38405 381 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 GRK6P43250 576 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 GATMP50440 423 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 KCNQ1P51787 676 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 DENND5AQ6IQ26 1287 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 SLC51AQ86UW1 340 aa17■□□□□ 0.31
SHANK1-201ENST00000293441 RASSF5Q8WWW0 418 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms