RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 PRLP01236 227 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 E2F2Q14209 437 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 SERPINA13PQ6UXR4 307 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 AGMOQ6ZNB7 445 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 COQ4Q9Y3A0 265 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 ST14Q9Y5Y6 855 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 A0A075B6Q4 140 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 IMPDH1P20839 514 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 GABRR2P28476 465 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 LILRA4P59901 499 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 PAQR3Q6TCH7 311 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 CTU1Q7Z7A3 348 aaKnown RBP15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 PLD6Q8N2A8 252 aaKnown RBP15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 PIK3R3Q92569 461 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 CXorf40BQ96DE9 158 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 ADAMTS6Q9UKP5 1117 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 PRELID1Q9Y255 219 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 RIMBP3CA6NJZ7 1639 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 RIMBP3BA6NNM3 1639 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 RIMBP3Q9UFD9 1639 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 SMIM35A0A1B0GVV1 85 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 SMIM30A4D0T7 59 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 PPEF2O14830 753 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 NIPSNAP2O75323 286 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 CCNDBP1O95273 360 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 FGBP02675 491 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 CYP11A1P05108 521 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 GGT5P36269 586 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 PGGT1BP53609 377 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 PPP1R3AQ16821 1122 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 TMEM236Q5W0B7 351 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 PEG10Q86TG7 708 aaKnown RBP15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 TMEM203Q969S6 136 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 PEBP4Q96S96 227 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 SOX17Q9H6I2 414 aaPredicted RBP15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 ASAH2Q9NR71 780 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 ARL5CA6NH57 179 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 GTPBP1O00178 669 aaKnown RBP15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 SLC35G4P0C7Q5 338 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 CDH5P33151 784 aaPredicted RBP15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 NUDT6P53370 316 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 SLC18A2Q05940 514 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 ARMC5Q96C12 935 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 PRDM8Q9NQV8 689 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 MIOSQ9NXC5 875 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 IFT172Q9UG01 1749 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 ECI2O75521 394 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 OPN1SWP03999 348 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 DLDP09622 509 aaKnown RBP15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 RGS1Q08116 209 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 SPRED3Q2MJR0 410 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 USP41Q3LFD5 358 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 RBM48Q5RL73 367 aaKnown RBP15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 FAM124AQ86V42 546 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 MTERF1Q99551 399 aaKnown RBP15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 CCDC106Q9BWC9 280 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 BRINP2Q9C0B6 783 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 ELAC1Q9H777 363 aaKnown RBP15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 TBC1D24Q9ULP9 559 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 CARD8Q9Y2G2 431 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 TRBV23OR9-2A0A075B6M9 112 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 SOWAHBA6NEL2 793 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 RSL1D1O76021 490 aaKnown RBP15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 VBP1P61758 197 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 RPS14P62263 151 aaKnown RBP15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 PIGFQ07326 219 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 C11orf65Q8NCR3 313 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 ZBTB26Q9HCK0 441 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 EIF3KQ9UBQ5 218 aaKnown RBP15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 OR6C70A6NIJ9 312 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 BOLA2-SMG1P6H3BVE0 249 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 CLDN11O75508 207 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 AHSGP02765 367 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 GMPRP36959 345 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 CHSY3Q70JA7 882 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 CFAP206Q8IYR0 622 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 RERGQ96A58 199 aaPredicted RBP15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 GAL3ST1Q99999 423 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 LRRC3Q9BY71 257 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 PSAT1Q9Y617 370 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 COL1A2P08123 1366 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 SLC22A2O15244 555 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 PCCBP05166 539 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 CSTF1Q05048 431 aaKnown RBP15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 PCBP1Q15365 356 aaKnown RBP eCLIP15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 SMU1Q2TAY7 513 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 CYP2U1Q7Z449 544 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 LAPTM4BQ86VI4 370 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 PJA1Q8NG27 643 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 GULP1Q9UBP9 304 aa15.09■□□□□ 0.01
SHROOM4-201ENST00000289292 H3BM21 787 aa15.08■□□□□ 0.01
SHROOM4-201ENST00000289292 GRIN3BO60391 1043 aa15.08■□□□□ 0.01
SHROOM4-201ENST00000289292 NME6O75414 186 aaPredicted RBP15.08■□□□□ 0.01
SHROOM4-201ENST00000289292 MAZP56270 477 aaKnown RBP15.08■□□□□ 0.01
SHROOM4-201ENST00000289292 NFKB2Q00653 900 aa15.08■□□□□ 0.01
SHROOM4-201ENST00000289292 CENPSQ8N2Z9 138 aa15.08■□□□□ 0.01
SHROOM4-201ENST00000289292 ENDOVQ8N8Q3 282 aaKnown RBP15.08■□□□□ 0.01
SHROOM4-201ENST00000289292 AP2M1Q96CW1 435 aa15.08■□□□□ 0.01
SHROOM4-201ENST00000289292 BARD1Q99728 777 aaKnown RBP15.08■□□□□ 0.01
SHROOM4-201ENST00000289292 PIGUQ9H490 435 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms