RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 HEATR4Q86WZ0 1026 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 ZNF547Q8IVP9 402 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 PARP9Q8IXQ6 854 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 RNF175Q8N4F7 328 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 AGAP11Q8TF27 550 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 PANX3Q96QZ0 392 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 C1orf50Q9BV19 199 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 IPPKQ9H8X2 491 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 MOSPD1Q9UJG1 213 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 ZFR2Q9UPR6 939 aaKnown RBP10.75□□□□□ -0.69
GGPS1-201ENST00000282841 COPG1Q9Y678 874 aaKnown RBP10.75□□□□□ -0.69
GGPS1-201ENST00000282841 ZNF106Q9H2Y7 1883 aaKnown RBP10.75□□□□□ -0.69
GGPS1-201ENST00000282841 TBC1D3DA0A087WVF3 549 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 TBC1D3IA0A087WXS9 549 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 TBC1D3EA0A087X179 549 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 TBC1D3KA0A087X1G2 549 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 TBC1D3FA6NER0 549 aaPredicted RBP10.75□□□□□ -0.69
GGPS1-201ENST00000282841 TBC1D3LB9A6J9 549 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 CFAP99D6REC4 459 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 AIM2O14862 343 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 RAD51BO15315 384 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 DNAJC8O75937 253 aaPredicted RBP10.75□□□□□ -0.69
GGPS1-201ENST00000282841 RPS17P08708 135 aaKnown RBP10.75□□□□□ -0.69
GGPS1-201ENST00000282841 TBC1D3HP0C7X1 549 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 RPL10P27635 214 aaKnown RBP10.75□□□□□ -0.69
GGPS1-201ENST00000282841 NTSR1P30989 418 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 MSX2P35548 267 aaPredicted RBP10.75□□□□□ -0.69
GGPS1-201ENST00000282841 ELF3P78545 371 aaPredicted RBP10.75□□□□□ -0.69
GGPS1-201ENST00000282841 NFKB2Q00653 900 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 ELP6Q0PNE2 266 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 LCP2Q13094 533 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 KLF10Q13118 480 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 TBC1D3GQ6DHY5 549 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 TBC1D3CQ6IPX1 549 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 KIAA1324Q6UXG2 1013 aaKnown RBP10.75□□□□□ -0.69
GGPS1-201ENST00000282841 TMEM92Q6UXU6 159 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 ACAD11Q709F0 780 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 ADGRG6Q86SQ4 1221 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 ADAMTSL2Q86TH1 951 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 TBC1D3Q8IZP1 549 aaPredicted RBP10.75□□□□□ -0.69
GGPS1-201ENST00000282841 DDHD1Q8NEL9 900 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 ULK4Q96C45 1275 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 C19orf60Q96EN9 201 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 DHRS1Q96LJ7 313 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 RSPH9Q9H1X1 276 aaPredicted RBP10.75□□□□□ -0.69
GGPS1-201ENST00000282841 AKTIPQ9H8T0 292 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 MRPL40Q9NQ50 206 aaKnown RBP10.75□□□□□ -0.69
GGPS1-201ENST00000282841 PRDM6Q9NQX0 595 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 ARHGEF3Q9NR81 526 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 EPS15L1Q9UBC2 864 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 SLC23A2Q9UGH3 650 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 OR7A17O14581 309 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 RNASEH1O60930 286 aaKnown RBP10.75□□□□□ -0.69
GGPS1-201ENST00000282841 VCLP18206 1134 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 CAMK2GQ13555 558 aaPredicted RBP10.75□□□□□ -0.69
GGPS1-201ENST00000282841 GTF2H2Q13888 395 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 GTF2H2CQ6P1K8 395 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 GK5Q6ZS86 529 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 SNX32Q86XE0 403 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 PHYKPLQ8IUZ5 450 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 TUBGCP3Q96CW5 907 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 UBE2ZQ9H832 354 aaPredicted RBP10.75□□□□□ -0.69
GGPS1-201ENST00000282841 UBAP1Q9NZ09 502 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 CCDC167Q9P0B6 97 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 PLAGL1Q9UM63 463 aa10.75□□□□□ -0.69
GGPS1-201ENST00000282841 H0Y8X5 98 aa10.74□□□□□ -0.69
GGPS1-201ENST00000282841 MAGEC1O60732 1142 aa10.74□□□□□ -0.69
GGPS1-201ENST00000282841 S100BP04271 92 aaPredicted RBP10.74□□□□□ -0.69
GGPS1-201ENST00000282841 CAPN1P07384 714 aa10.74□□□□□ -0.69
GGPS1-201ENST00000282841 CLDN2P57739 230 aa10.74□□□□□ -0.69
GGPS1-201ENST00000282841 CUL3Q13618 768 aa10.74□□□□□ -0.69
GGPS1-201ENST00000282841 TTLL9Q3SXZ7 439 aa10.74□□□□□ -0.69
GGPS1-201ENST00000282841 FAM83HQ6ZRV2 1179 aaPredicted RBP10.74□□□□□ -0.69
GGPS1-201ENST00000282841 NUDT18Q6ZVK8 323 aa10.74□□□□□ -0.69
GGPS1-201ENST00000282841 RNF148Q8N7C7 305 aa10.74□□□□□ -0.69
GGPS1-201ENST00000282841 OR4F6Q8NGB9 312 aa10.74□□□□□ -0.69
GGPS1-201ENST00000282841 OR2T11Q8NH01 316 aa10.74□□□□□ -0.69
GGPS1-201ENST00000282841 RHBDF1Q96CC6 855 aa10.74□□□□□ -0.69
GGPS1-201ENST00000282841 GAS2L1Q99501 681 aaPredicted RBP10.74□□□□□ -0.69
GGPS1-201ENST00000282841 RABL2AQ9UBK7 228 aaPredicted RBP10.74□□□□□ -0.69
GGPS1-201ENST00000282841 BAIAP2L1Q9UHR4 511 aa10.74□□□□□ -0.69
GGPS1-201ENST00000282841 TAGLN3Q9UI15 199 aa10.74□□□□□ -0.69
GGPS1-201ENST00000282841 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.74□□□□□ -0.69
GGPS1-201ENST00000282841 RNF11Q9Y3C5 154 aa10.74□□□□□ -0.69
GGPS1-201ENST00000282841 PLEKHM1Q9Y4G2 1056 aa10.74□□□□□ -0.69
GGPS1-201ENST00000282841 ANGPTL3Q9Y5C1 460 aa10.74□□□□□ -0.69
GGPS1-201ENST00000282841 MBTPS2O43462 519 aa10.74□□□□□ -0.69
GGPS1-201ENST00000282841 FUCA1P04066 466 aa10.74□□□□□ -0.69
GGPS1-201ENST00000282841 RPSAP08865 295 aaKnown RBP10.74□□□□□ -0.69
GGPS1-201ENST00000282841 ALDOCP09972 364 aaKnown RBP10.74□□□□□ -0.69
GGPS1-201ENST00000282841 PIK3R1P27986 724 aa10.74□□□□□ -0.69
GGPS1-201ENST00000282841 PTPN4P29074 926 aa10.74□□□□□ -0.69
GGPS1-201ENST00000282841 VASPP50552 380 aaPredicted RBP10.74□□□□□ -0.69
GGPS1-201ENST00000282841 NEK2P51955 445 aa10.74□□□□□ -0.69
GGPS1-201ENST00000282841 ATXN3P54252 364 aaPredicted RBP10.74□□□□□ -0.69
GGPS1-201ENST00000282841 PTPN5P54829 565 aa10.74□□□□□ -0.69
GGPS1-201ENST00000282841 DIO3P55073 304 aa10.74□□□□□ -0.69
GGPS1-201ENST00000282841 DCDC1P59894 354 aa10.74□□□□□ -0.69
GGPS1-201ENST00000282841 PPP2CBP62714 309 aa10.74□□□□□ -0.69
GGPS1-201ENST00000282841 PPP2CAP67775 309 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms