RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 CYP4F3Q08477 520 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 MGAT5Q09328 741 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 CUL1Q13616 776 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 TSTA3Q13630 321 aaPredicted RBP6.37□□□□□ -1.39
CD44-204ENST00000279452 NR1D2Q14995 579 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 TRADDQ15628 312 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 TEX35Q5T0J7 233 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 TMEM71Q6P5X7 295 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 TRMT10BQ6PF06 316 aaKnown RBP6.37□□□□□ -1.39
CD44-204ENST00000279452 TMPRSS9Q7Z410 1059 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 TAX1BP1Q86VP1 789 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 PLXDC1Q8IUK5 500 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 VRK3Q8IV63 474 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 CTAGE3PQ8IX95 158 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 FBXO39Q8N4B4 442 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 MMGT1Q8N4V1 131 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 RAB42Q8N4Z0 105 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 SIDT2Q8NBJ9 832 aaKnown RBP6.37□□□□□ -1.39
CD44-204ENST00000279452 ACVR1CQ8NER5 493 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 OR4E2Q8NGC2 313 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 OR4D9Q8NGE8 314 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 OR52E1Q8NGJ3 308 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 OR5AR1Q8NGP9 310 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 WDR36Q8NI36 951 aaKnown RBP6.37□□□□□ -1.39
CD44-204ENST00000279452 ART4Q93070 314 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 ZDHHC12Q96GR4 267 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 C9orf72Q96LT7 481 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 FOPNLQ96NB1 174 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 CNTNAP3BQ96NU0 1288 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 DPYSL5Q9BPU6 564 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 RHOXF2Q9BQY4 288 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 CNTNAP3Q9BZ76 1288 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 P2RY12Q9H244 342 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 EPB41L1Q9H4G0 881 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 XKR8Q9H6D3 395 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 KIR3DX1Q9H7L2 352 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 MVB12BQ9H7P6 319 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 LATS2Q9NRM7 1088 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 FAM114A2Q9NRY5 505 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 HRASLS2Q9NWW9 162 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 SOHLH2Q9NX45 425 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 SLC24A2Q9UI40 661 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 TRMT6Q9UJA5 497 aaKnown RBP6.37□□□□□ -1.39
CD44-204ENST00000279452 SLC39A10Q9ULF5 831 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 PLAGL1Q9UM63 463 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 WASF3Q9UPY6 502 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 RUVBL2Q9Y230 463 aaKnown RBP6.37□□□□□ -1.39
CD44-204ENST00000279452 COMMD10Q9Y6G5 202 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 TEX264Q9Y6I9 313 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 ASCC3Q8N3C0 2202 aaKnown RBP6.36□□□□□ -1.39
CD44-204ENST00000279452 SLC5A10A0PJK1 596 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 PMS2P1A4D2B8 440 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 OR5K3A6NET4 321 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 EFCAB7A8K855 629 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 BHMG1C9JSJ3 638 aaPredicted RBP6.36□□□□□ -1.39
CD44-204ENST00000279452 E7ESA3 106 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 EIF3HO15372 352 aaKnown RBP eCLIP6.36□□□□□ -1.39
CD44-204ENST00000279452 BRINP1O60477 761 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 SYF2O95926 243 aaKnown RBP6.36□□□□□ -1.39
CD44-204ENST00000279452 THRAP10827 490 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 POLR2CP19387 275 aaPredicted RBP6.36□□□□□ -1.39
CD44-204ENST00000279452 AOAHP28039 575 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 SSTR1P30872 391 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 CCKBRP32239 447 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 MAGEA4P43358 317 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 LIMK2P53671 638 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 SLC12A2P55011 1212 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 PPP1CAP62136 330 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 FOXM1Q08050 763 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 EIF3IQ13347 325 aaKnown RBP6.36□□□□□ -1.39
CD44-204ENST00000279452 PDAP1Q13442 181 aaKnown RBP6.36□□□□□ -1.39
CD44-204ENST00000279452 C16orf72Q14CZ0 275 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 UAP1Q16222 522 aaPredicted RBP6.36□□□□□ -1.39
CD44-204ENST00000279452 CLPPQ16740 277 aaPredicted RBP6.36□□□□□ -1.39
CD44-204ENST00000279452 ST3GAL2Q16842 350 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 GLE1Q53GS7 698 aaKnown RBP6.36□□□□□ -1.39
CD44-204ENST00000279452 PLEKHS1Q5SXH7 462 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 RBM20Q5T481 1227 aaKnown RBP6.36□□□□□ -1.39
CD44-204ENST00000279452 CACHD1Q5VU97 1274 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 CAPRIN2Q6IMN6 1127 aaKnown RBP6.36□□□□□ -1.39
CD44-204ENST00000279452 UGT3A1Q6NUS8 523 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 WDR74Q6RFH5 385 aaPredicted RBP6.36□□□□□ -1.39
CD44-204ENST00000279452 XKR5Q6UX68 686 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 ZDHHC24Q6UX98 284 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 CEP128Q6ZU80 1094 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 STRA8Q7Z7C7 330 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 AMIGO1Q86WK6 493 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 SLITRK4Q8IW52 837 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 SLC22A15Q8IZD6 547 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 C2orf73Q8N5S3 287 aaPredicted RBP6.36□□□□□ -1.39
CD44-204ENST00000279452 C2CD4AQ8NCU7 369 aaPredicted RBP6.36□□□□□ -1.39
CD44-204ENST00000279452 AGBL5Q8NDL9 886 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 KCNJ9Q92806 393 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 GATA6Q92908 595 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 GRAMD1AQ96CP6 724 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 MRRFQ96E11 262 aaKnown RBP6.36□□□□□ -1.39
CD44-204ENST00000279452 LIN37Q96GY3 246 aaPredicted RBP6.36□□□□□ -1.39
CD44-204ENST00000279452 NAF1Q96HR8 494 aaKnown RBP6.36□□□□□ -1.39
CD44-204ENST00000279452 ELMO2Q96JJ3 720 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 BIRC8Q96P09 236 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms