RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 STX7O15400 261 aaKnown RBP12.69□□□□□ -0.38
C9orf3-201ENST00000277198 TBC1D4O60343 1298 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 HPRP00739 348 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 F11P03951 625 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 RAP2AP10114 183 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 HRH2P25021 359 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 HK3P52790 923 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 ARPP19P56211 112 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 YBX1P67809 324 aaKnown RBP12.69□□□□□ -0.38
C9orf3-201ENST00000277198 GRSF1Q12849 480 aaKnown RBP eCLIP12.69□□□□□ -0.38
C9orf3-201ENST00000277198 TIGD2Q4W5G0 525 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 FAM219BQ5XKK7 198 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 GLYATQ6IB77 296 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 CES5AQ6NT32 575 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 METTL2BQ6P1Q9 378 aaKnown RBP12.69□□□□□ -0.38
C9orf3-201ENST00000277198 DLEU7Q6UYE1 221 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 PIANPQ8IYJ0 282 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 CFAP52Q8N1V2 620 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 SIDT2Q8NBJ9 832 aaKnown RBP12.69□□□□□ -0.38
C9orf3-201ENST00000277198 KREMEN2Q8NCW0 462 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 PDZD8Q8NEN9 1154 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 ST13P5Q8NFI4 369 aaPredicted RBP12.69□□□□□ -0.38
C9orf3-201ENST00000277198 OR52E4Q8NGH9 312 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 MAGEE2Q8TD90 523 aaPredicted RBP12.69□□□□□ -0.38
C9orf3-201ENST00000277198 EEF1AKMT1Q8WVE0 214 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 C12orf43Q96C57 262 aaKnown RBP12.69□□□□□ -0.38
C9orf3-201ENST00000277198 MUC3BQ9H195 1237 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 GORASP2Q9H8Y8 452 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 PREBQ9HCU5 417 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.69□□□□□ -0.38
C9orf3-201ENST00000277198 DHRS7Q9Y394 339 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 ZNF711Q9Y462 761 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 RAI2Q9Y5P3 530 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 DOCK6Q96HP0 2047 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.69□□□□□ -0.38
C9orf3-201ENST00000277198 A0A0J9YVX5 310 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 NCF1BA6NI72 391 aaPredicted RBP12.69□□□□□ -0.38
C9orf3-201ENST00000277198 NCF1CA8MVU1 366 aaPredicted RBP12.69□□□□□ -0.38
C9orf3-201ENST00000277198 GMNNO75496 209 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 OR4F21O95013 312 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 OTCP00480 354 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 ALBP02768 609 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 NCF1P14598 390 aaPredicted RBP12.69□□□□□ -0.38
C9orf3-201ENST00000277198 VARSP26640 1264 aaKnown RBP12.69□□□□□ -0.38
C9orf3-201ENST00000277198 IL12AP29459 219 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 SLC6A4P31645 630 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 RGRP47804 291 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 ALDH3A2P51648 485 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 ERVPABLB-1P60509 514 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 MAD2L1Q13257 205 aaPredicted RBP12.69□□□□□ -0.38
C9orf3-201ENST00000277198 ZNF177Q13360 481 aaPredicted RBP12.69□□□□□ -0.38
C9orf3-201ENST00000277198 PWP1Q13610 501 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 FUT11Q495W5 492 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 FAM98BQ52LJ0 330 aaKnown RBP12.69□□□□□ -0.38
C9orf3-201ENST00000277198 PSAPL1Q6NUJ1 521 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 ZNF783Q6ZMS7 281 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 GPR149Q86SP6 731 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 CDYL2Q8N8U2 506 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 LPCAT1Q8NF37 534 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 METTL6Q8TCB7 284 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 PLD4Q96BZ4 506 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 PPP3R2Q96LZ3 170 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 ACOX2Q99424 681 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 SEPT5Q99719 369 aaPredicted RBP12.69□□□□□ -0.38
C9orf3-201ENST00000277198 SPON2Q9BUD6 331 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 P2RY12Q9H244 342 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 INTS7Q9NVH2 962 aaKnown RBP12.69□□□□□ -0.38
C9orf3-201ENST00000277198 EIF2B4Q9UI10 523 aaKnown RBP12.69□□□□□ -0.38
C9orf3-201ENST00000277198 SLC27A5Q9Y2P5 690 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 A0A1B0GVM2 712 aa12.68□□□□□ -0.38
C9orf3-201ENST00000277198 SLC38A8A6NNN8 435 aa12.68□□□□□ -0.38
C9orf3-201ENST00000277198 NIPSNAP2O75323 286 aa12.68□□□□□ -0.38
C9orf3-201ENST00000277198 CPNE6O95741 557 aa12.68□□□□□ -0.38
C9orf3-201ENST00000277198 ANXA6P08133 673 aa12.68□□□□□ -0.38
C9orf3-201ENST00000277198 RHOCP08134 193 aa12.68□□□□□ -0.38
C9orf3-201ENST00000277198 PCSK2P16519 638 aa12.68□□□□□ -0.38
C9orf3-201ENST00000277198 JUNBP17275 347 aaPredicted RBP12.68□□□□□ -0.38
C9orf3-201ENST00000277198 CLCN7P51798 805 aa12.68□□□□□ -0.38
C9orf3-201ENST00000277198 NTHL1P78549 312 aa12.68□□□□□ -0.38
C9orf3-201ENST00000277198 CACNG1Q06432 222 aa12.68□□□□□ -0.38
C9orf3-201ENST00000277198 TUBA3CQ13748 450 aa12.68□□□□□ -0.38
C9orf3-201ENST00000277198 LYSMD3Q7Z3D4 306 aa12.68□□□□□ -0.38
C9orf3-201ENST00000277198 SFRP1Q8N474 314 aa12.68□□□□□ -0.38
C9orf3-201ENST00000277198 TTC30BQ8N4P2 665 aa12.68□□□□□ -0.38
C9orf3-201ENST00000277198 GLB1L3Q8NCI6 653 aaPredicted RBP12.68□□□□□ -0.38
C9orf3-201ENST00000277198 AURKBQ96GD4 344 aaPredicted RBP12.68□□□□□ -0.38
C9orf3-201ENST00000277198 FBXL20Q96IG2 436 aa12.68□□□□□ -0.38
C9orf3-201ENST00000277198 NSMCE3Q96MG7 304 aa12.68□□□□□ -0.38
C9orf3-201ENST00000277198 TMEM74Q96NL1 305 aa12.68□□□□□ -0.38
C9orf3-201ENST00000277198 CGREF1Q99674 301 aa12.68□□□□□ -0.38
C9orf3-201ENST00000277198 SH3GL1Q99961 368 aa12.68□□□□□ -0.38
C9orf3-201ENST00000277198 UGT2B28Q9BY64 529 aa12.68□□□□□ -0.38
C9orf3-201ENST00000277198 SLAMF8Q9P0V8 285 aa12.68□□□□□ -0.38
C9orf3-201ENST00000277198 FKBPLQ9UIM3 349 aa12.68□□□□□ -0.38
C9orf3-201ENST00000277198 BPTFQ12830 3046 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 SH3PXD2BA1X283 911 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 PRMT5O14744 637 aaPredicted RBP12.67□□□□□ -0.38
C9orf3-201ENST00000277198 ANKRD28O15084 1053 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 LSM1O15116 133 aaKnown RBP12.67□□□□□ -0.38
C9orf3-201ENST00000277198 RAD51BO15315 384 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms