RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 NVLO15381 856 aaKnown RBP9.39□□□□□ -0.91
TRIM55-201ENST00000276573 SLCO2B1O94956 709 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 EBLN1P0CF75 366 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 CAPN3P20807 821 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 GJA4P35212 333 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 MSX2P35548 267 aaPredicted RBP9.39□□□□□ -0.91
TRIM55-201ENST00000276573 PIK3CGP48736 1102 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 EMX2Q04743 252 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 ELP6Q0PNE2 266 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 HYAL1Q12794 435 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 ELAVL3Q14576 367 aaKnown RBP9.39□□□□□ -0.91
TRIM55-201ENST00000276573 ABRAXAS2Q15018 415 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 TAF11Q15544 211 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 ZXDCQ2QGD7 858 aaPredicted RBP9.39□□□□□ -0.91
TRIM55-201ENST00000276573 VPS26BQ4G0F5 336 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 PDCD4Q53EL6 469 aaKnown RBP9.39□□□□□ -0.91
TRIM55-201ENST00000276573 ANKRD54Q6NXT1 300 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 LAYNQ6UX15 382 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 RNF111Q6ZNA4 994 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 RNF165Q6ZSG1 346 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 CYP2U1Q7Z449 544 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 RETREG3Q86VR2 466 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 NLRP8Q86W28 1048 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 HOMEZQ8IX15 550 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 BEND7Q8N7W2 519 aaPredicted RBP9.39□□□□□ -0.91
TRIM55-201ENST00000276573 PPFIBP2Q8ND30 876 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 HIPK4Q8NE63 616 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 MCOLN3Q8TDD5 553 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 UCMAQ8WVF2 138 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 PPP2R3CQ969Q6 453 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 ROPN1LQ96C74 230 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 DTD2Q96FN9 168 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 SLC28A3Q9HAS3 691 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 TMEM181Q9P2C4 612 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 THAP10Q9P2Z0 257 aaPredicted RBP9.39□□□□□ -0.91
TRIM55-201ENST00000276573 CD300AQ9UGN4 299 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 TRPS1Q9UHF7 1281 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 BCAP29Q9UHQ4 241 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 CNOT6Q9ULM6 557 aaKnown RBP9.39□□□□□ -0.91
TRIM55-201ENST00000276573 COQ6Q9Y2Z9 468 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 RNF11Q9Y3C5 154 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 CCL27Q9Y4X3 112 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 PLXNA2O75051 1894 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 LAMA2P24043 3122 aaKnown RBP9.38□□□□□ -0.91
TRIM55-201ENST00000276573 PRRC2BQ5JSZ5 2229 aaKnown RBP9.38□□□□□ -0.91
TRIM55-201ENST00000276573 ANTXRLA6NF34 631 aa9.38□□□□□ -0.91
TRIM55-201ENST00000276573 PLK4O00444 970 aa9.38□□□□□ -0.91
TRIM55-201ENST00000276573 ACOT8O14734 319 aa9.38□□□□□ -0.91
TRIM55-201ENST00000276573 SLC22A3O75751 556 aa9.38□□□□□ -0.91
TRIM55-201ENST00000276573 BCAS2O75934 225 aaPredicted RBP9.38□□□□□ -0.91
TRIM55-201ENST00000276573 WDR47O94967 919 aa9.38□□□□□ -0.91
TRIM55-201ENST00000276573 RPSAP08865 295 aaKnown RBP9.38□□□□□ -0.91
TRIM55-201ENST00000276573 ZFP36L2P47974 494 aaKnown RBP9.38□□□□□ -0.91
TRIM55-201ENST00000276573 HNMTP50135 292 aa9.38□□□□□ -0.91
TRIM55-201ENST00000276573 CTSCP53634 463 aa9.38□□□□□ -0.91
TRIM55-201ENST00000276573 UFM1P61960 85 aa9.38□□□□□ -0.91
TRIM55-201ENST00000276573 SP140Q13342 867 aa9.38□□□□□ -0.91
TRIM55-201ENST00000276573 RAB30Q15771 203 aa9.38□□□□□ -0.91
TRIM55-201ENST00000276573 TMEM52BQ4KMG9 183 aa9.38□□□□□ -0.91
TRIM55-201ENST00000276573 ATP6AP1LQ52LC2 224 aa9.38□□□□□ -0.91
TRIM55-201ENST00000276573 COQ5Q5HYK3 327 aa9.38□□□□□ -0.91
TRIM55-201ENST00000276573 TMEM220Q6QAJ8 160 aa9.38□□□□□ -0.91
TRIM55-201ENST00000276573 YAF2Q8IY57 180 aa9.38□□□□□ -0.91
TRIM55-201ENST00000276573 FNDC5Q8NAU1 212 aa9.38□□□□□ -0.91
TRIM55-201ENST00000276573 SKA2Q8WVK7 121 aaPredicted RBP9.38□□□□□ -0.91
TRIM55-201ENST00000276573 SUSD6Q92537 303 aa9.38□□□□□ -0.91
TRIM55-201ENST00000276573 TEX37Q96LM6 180 aa9.38□□□□□ -0.91
TRIM55-201ENST00000276573 ZNF570Q96NI8 536 aa9.38□□□□□ -0.91
TRIM55-201ENST00000276573 MYADMQ96S97 322 aa9.38□□□□□ -0.91
TRIM55-201ENST00000276573 P2RY13Q9BPV8 354 aa9.38□□□□□ -0.91
TRIM55-201ENST00000276573 HOPXQ9BPY8 73 aaPredicted RBP9.38□□□□□ -0.91
TRIM55-201ENST00000276573 GPATCH1Q9BRR8 931 aaKnown RBP9.38□□□□□ -0.91
TRIM55-201ENST00000276573 CCM2Q9BSQ5 444 aa9.38□□□□□ -0.91
TRIM55-201ENST00000276573 TMEM45AQ9NWC5 275 aa9.38□□□□□ -0.91
TRIM55-201ENST00000276573 NMRK1Q9NWW6 199 aa9.38□□□□□ -0.91
TRIM55-201ENST00000276573 ZIM2Q9NZV7 527 aa9.38□□□□□ -0.91
TRIM55-201ENST00000276573 MCM8Q9UJA3 840 aa9.38□□□□□ -0.91
TRIM55-201ENST00000276573 HCN2Q9UL51 889 aa9.38□□□□□ -0.91
TRIM55-201ENST00000276573 CHD7Q9P2D1 2997 aa9.38□□□□□ -0.91
TRIM55-201ENST00000276573 A0A1W2PP18 115 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 SLC5A10A0PJK1 596 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 TMEM202A6NGA9 273 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 H3BNX3 289 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 SLC28A1O00337 649 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 LSM1O15116 133 aaKnown RBP9.37□□□□□ -0.91
TRIM55-201ENST00000276573 ANGPT2O15123 496 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 INPP4BO15327 924 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 RECQL5O94762 991 aaPredicted RBP9.37□□□□□ -0.91
TRIM55-201ENST00000276573 ADRB3P13945 408 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 EPORP19235 508 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 CYP2A7P20853 494 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 IL12RB1P42701 662 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 SLC6A12P48065 614 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 AP1S2P56377 157 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 ABRQ12979 859 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 FLOT2Q14254 428 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 TRIM25Q14258 630 aaKnown RBP9.37□□□□□ -0.91
TRIM55-201ENST00000276573 GRM2Q14416 872 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 SMU1Q2TAY7 513 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 AP5B1Q2VPB7 878 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms