RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 CD36P16671 472 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 ALOX12P18054 663 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 ITIH1P19827 911 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 SERPINB10P48595 397 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 CYP4F3Q08477 520 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 ILF2Q12905 390 aaKnown RBP12.7□□□□□ -0.38
COL8A1-202ENST00000273342 XKR7Q5GH72 579 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 THOC7Q6I9Y2 204 aaKnown RBP12.7□□□□□ -0.38
COL8A1-202ENST00000273342 SCD5Q86SK9 330 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 PIANPQ8IYJ0 282 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 IGSF8Q969P0 613 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 ZBED2Q9BTP6 218 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 BRINP2Q9C0B6 783 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 TP63Q9H3D4 680 aaPredicted RBP12.7□□□□□ -0.38
COL8A1-202ENST00000273342 MAGEE1Q9HCI5 957 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 IL37Q9NZH6 218 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 SPO11Q9Y5K1 396 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 COL1A2P08123 1366 aa12.69□□□□□ -0.38
COL8A1-202ENST00000273342 PLXNA1Q9UIW2 1896 aa12.69□□□□□ -0.38
COL8A1-202ENST00000273342 ELOVL7A1L3X0 281 aa12.69□□□□□ -0.38
COL8A1-202ENST00000273342 MOXD2PA6NHM9 499 aa12.69□□□□□ -0.38
COL8A1-202ENST00000273342 TTC34A8MYJ7 566 aa12.69□□□□□ -0.38
COL8A1-202ENST00000273342 GPR182O15218 404 aa12.69□□□□□ -0.38
COL8A1-202ENST00000273342 FAM20BO75063 409 aa12.69□□□□□ -0.38
COL8A1-202ENST00000273342 RPP40O75818 363 aaKnown RBP12.69□□□□□ -0.38
COL8A1-202ENST00000273342 RECQL5O94762 991 aaPredicted RBP12.69□□□□□ -0.38
COL8A1-202ENST00000273342 GABARAPO95166 117 aa12.69□□□□□ -0.38
COL8A1-202ENST00000273342 IGFBP5P24593 272 aa12.69□□□□□ -0.38
COL8A1-202ENST00000273342 CYP4F2P78329 520 aa12.69□□□□□ -0.38
COL8A1-202ENST00000273342 PON2Q15165 354 aa12.69□□□□□ -0.38
COL8A1-202ENST00000273342 DDR2Q16832 855 aa12.69□□□□□ -0.38
COL8A1-202ENST00000273342 VARS2Q5ST30 1063 aaKnown RBP12.69□□□□□ -0.38
COL8A1-202ENST00000273342 ZNF691Q5VV52 312 aa12.69□□□□□ -0.38
COL8A1-202ENST00000273342 UBE2UQ5VVX9 321 aa12.69□□□□□ -0.38
COL8A1-202ENST00000273342 Q6ZPB1 254 aaPredicted RBP12.69□□□□□ -0.38
COL8A1-202ENST00000273342 CEP68Q76N32 757 aa12.69□□□□□ -0.38
COL8A1-202ENST00000273342 OR4F6Q8NGB9 312 aa12.69□□□□□ -0.38
COL8A1-202ENST00000273342 RHEBL1Q8TAI7 183 aa12.69□□□□□ -0.38
COL8A1-202ENST00000273342 GIPC2Q8TF65 315 aa12.69□□□□□ -0.38
COL8A1-202ENST00000273342 MROH8Q9H579 483 aa12.69□□□□□ -0.38
COL8A1-202ENST00000273342 SYTL2Q9HCH5 934 aa12.69□□□□□ -0.38
COL8A1-202ENST00000273342 ABI2Q9NYB9 513 aaPredicted RBP12.69□□□□□ -0.38
COL8A1-202ENST00000273342 TMEFF2Q9UIK5 374 aaPredicted RBP12.69□□□□□ -0.38
COL8A1-202ENST00000273342 CDH9Q9ULB4 789 aa12.69□□□□□ -0.38
COL8A1-202ENST00000273342 SCN4AP35499 1836 aa12.69□□□□□ -0.38
COL8A1-202ENST00000273342 ITGB1P05556 798 aa12.69□□□□□ -0.38
COL8A1-202ENST00000273342 ALOX5P09917 674 aa12.69□□□□□ -0.38
COL8A1-202ENST00000273342 ST13P50502 369 aaKnown RBP12.69□□□□□ -0.38
COL8A1-202ENST00000273342 MLLT6P55198 1093 aaPredicted RBP12.69□□□□□ -0.38
COL8A1-202ENST00000273342 ZNF33AQ06730 810 aa12.69□□□□□ -0.38
COL8A1-202ENST00000273342 PWP1Q13610 501 aa12.69□□□□□ -0.38
COL8A1-202ENST00000273342 ZNF235Q14590 738 aa12.69□□□□□ -0.38
COL8A1-202ENST00000273342 STEAP3Q658P3 488 aa12.69□□□□□ -0.38
COL8A1-202ENST00000273342 CES5AQ6NT32 575 aa12.69□□□□□ -0.38
COL8A1-202ENST00000273342 PSAPL1Q6NUJ1 521 aa12.69□□□□□ -0.38
COL8A1-202ENST00000273342 CCDC117Q8IWD4 279 aaPredicted RBP12.69□□□□□ -0.38
COL8A1-202ENST00000273342 SLC13A3Q8WWT9 602 aa12.69□□□□□ -0.38
COL8A1-202ENST00000273342 SLC10A4Q96EP9 437 aa12.69□□□□□ -0.38
COL8A1-202ENST00000273342 RPRD1AQ96P16 312 aaPredicted RBP12.69□□□□□ -0.38
COL8A1-202ENST00000273342 APOL5Q9BWW9 433 aa12.69□□□□□ -0.38
COL8A1-202ENST00000273342 SLC25A37Q9NYZ2 338 aa12.69□□□□□ -0.38
COL8A1-202ENST00000273342 ZIM2Q9NZV7 527 aa12.69□□□□□ -0.38
COL8A1-202ENST00000273342 E5RI56 91 aa12.68□□□□□ -0.38
COL8A1-202ENST00000273342 SLC22A1O15245 554 aa12.68□□□□□ -0.38
COL8A1-202ENST00000273342 SSX4O60224 188 aa12.68□□□□□ -0.38
COL8A1-202ENST00000273342 KCNK2O95069 426 aa12.68□□□□□ -0.38
COL8A1-202ENST00000273342 CYP11A1P05108 521 aa12.68□□□□□ -0.38
COL8A1-202ENST00000273342 PCSK1P29120 753 aa12.68□□□□□ -0.38
COL8A1-202ENST00000273342 SLC26A3P40879 764 aa12.68□□□□□ -0.38
COL8A1-202ENST00000273342 TRPC1P48995 793 aa12.68□□□□□ -0.38
COL8A1-202ENST00000273342 ZRANB3Q5FWF4 1079 aa12.68□□□□□ -0.38
COL8A1-202ENST00000273342 MANEALQ5VSG8 457 aa12.68□□□□□ -0.38
COL8A1-202ENST00000273342 TAS2R42Q7RTR8 314 aa12.68□□□□□ -0.38
COL8A1-202ENST00000273342 GATAD2AQ86YP4 633 aa12.68□□□□□ -0.38
COL8A1-202ENST00000273342 ZNF548Q8NEK5 533 aaPredicted RBP12.68□□□□□ -0.38
COL8A1-202ENST00000273342 DYNC2LI1Q8TCX1 351 aa12.68□□□□□ -0.38
COL8A1-202ENST00000273342 RHBDF1Q96CC6 855 aa12.68□□□□□ -0.38
COL8A1-202ENST00000273342 MYEOVQ96EZ4 313 aa12.68□□□□□ -0.38
COL8A1-202ENST00000273342 PSD2Q9BQI7 771 aa12.68□□□□□ -0.38
COL8A1-202ENST00000273342 SPON2Q9BUD6 331 aa12.68□□□□□ -0.38
COL8A1-202ENST00000273342 ATP13A1Q9HD20 1204 aa12.68□□□□□ -0.38
COL8A1-202ENST00000273342 VTA1Q9NP79 307 aa12.68□□□□□ -0.38
COL8A1-202ENST00000273342 PKP3Q9Y446 797 aa12.68□□□□□ -0.38
COL8A1-202ENST00000273342 GMPPBQ9Y5P6 360 aa12.68□□□□□ -0.38
COL8A1-202ENST00000273342 EFCAB9A8MZ26 197 aa12.68□□□□□ -0.38
COL8A1-202ENST00000273342 UPK3BL1B0FP48 263 aa12.68□□□□□ -0.38
COL8A1-202ENST00000273342 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.68□□□□□ -0.38
COL8A1-202ENST00000273342 UPK3BL2E5RIL1 263 aa12.68□□□□□ -0.38
COL8A1-202ENST00000273342 E2F3O00716 465 aa12.68□□□□□ -0.38
COL8A1-202ENST00000273342 LRATO95237 230 aa12.68□□□□□ -0.38
COL8A1-202ENST00000273342 FAM189BP81408 668 aa12.68□□□□□ -0.38
COL8A1-202ENST00000273342 CARD16Q5EG05 197 aa12.68□□□□□ -0.38
COL8A1-202ENST00000273342 DESI1Q6ICB0 168 aa12.68□□□□□ -0.38
COL8A1-202ENST00000273342 ADHFE1Q8IWW8 467 aa12.68□□□□□ -0.38
COL8A1-202ENST00000273342 CCDC97Q96F63 343 aaPredicted RBP12.68□□□□□ -0.38
COL8A1-202ENST00000273342 ABCC13Q9NSE7 274 aa12.68□□□□□ -0.38
COL8A1-202ENST00000273342 TRMT6Q9UJA5 497 aaKnown RBP12.68□□□□□ -0.38
COL8A1-202ENST00000273342 ABCG2Q9UNQ0 655 aa12.68□□□□□ -0.38
COL8A1-202ENST00000273342 PTCH2Q9Y6C5 1203 aa12.68□□□□□ -0.38
COL8A1-202ENST00000273342 RAD51BO15315 384 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms