RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 TSGA13Q96PP4 275 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 MIPEPQ99797 713 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 SLITRK2Q9H156 845 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 CCNA2P20248 432 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 TM4SF4P48230 202 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 PITRM1Q5JRX3 1037 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 RALGPS1Q5JS13 557 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 TRIQKQ629K1 86 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 SLC13A3Q8WWT9 602 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 IGSF8Q969P0 613 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 R3HDMLQ9H3Y0 253 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 USP29Q9HBJ7 922 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 HMG20AQ9NP66 347 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 CCNB1IP1Q9NPC3 277 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 TRPS1Q9UHF7 1281 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 CITO14578 2027 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 UPK3BL1B0FP48 263 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 UPK3BL2E5RIL1 263 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 KERAO60938 352 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 GKP32189 559 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 TOMM20Q15388 145 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 RAB6CQ53S08 254 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 PIM3Q86V86 326 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 ZSCAN5AQ9BUG6 496 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 KIFC1Q9BW19 673 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 RAB6CQ9H0N0 254 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 IL23AQ9NPF7 189 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 ITM2CQ9NQX7 267 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 CENPXA8MT69 81 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 CHURC1-FNTBB4DL54 471 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 SLC22A2O15244 555 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 HLA-DQA2P01906 255 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 HLA-EP13747 358 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 AKT2P31751 481 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 AP1S2P56377 157 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 ERVK-8P63133 956 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 SRSF11Q05519 484 aaKnown RBP15.15■□□□□ 0.02
TIMP3-201ENST00000266085 MARCH8Q5T0T0 291 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 TMEM198Q66K66 360 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 COMMD2Q86X83 199 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 HIPK1Q86Z02 1210 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 CMTR2Q8IYT2 770 aaKnown RBP15.15■□□□□ 0.02
TIMP3-201ENST00000266085 UMODL1-AS1Q8N2C9 162 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 EBPLQ9BY08 206 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 DLX3O60479 287 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 DLDP09622 509 aaKnown RBP15.15■□□□□ 0.02
TIMP3-201ENST00000266085 CCNFP41002 786 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 MTHFRP42898 656 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 SLC18A2Q05940 514 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 LRRC66Q68CR7 880 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 MRPL10Q7Z7H8 261 aaKnown RBP15.15■□□□□ 0.02
TIMP3-201ENST00000266085 LRRTM3Q86VH5 581 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 IGDCC3Q8IVU1 814 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 ADGRG2Q8IZP9 1017 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 TEX47Q8TBZ9 253 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 BRINP2Q9C0B6 783 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 CARS2Q9HA77 564 aaKnown RBP15.15■□□□□ 0.02
TIMP3-201ENST00000266085 TMLHEQ9NVH6 421 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 OSER1Q9NX31 292 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 MTRRQ9UBK8 725 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 BACE2Q9Y5Z0 518 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 MT-ND1P03886 318 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 EDN1P05305 212 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 TAS2R41P59536 307 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 MAPK11Q15759 364 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 DPY19L1Q2PZI1 675 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 CAND1Q86VP6 1230 aaKnown RBP15.15■□□□□ 0.02
TIMP3-201ENST00000266085 PRDM8Q9NQV8 689 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 MAP4K5Q9Y4K4 846 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 ECI2O75521 394 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 UGT2B17O75795 530 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 SCELO95171 688 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 CYP4B1P13584 511 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 NDUFA9Q16795 377 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 SLC9B1Q4ZJI4 515 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 GCNT6Q5T4J0 391 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 RELL1Q8IUW5 271 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 SMYD1Q8NB12 490 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 OR10A6Q8NH74 314 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 PSKH2Q96QS6 385 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 MRPS26Q9BYN8 205 aaKnown RBP15.15■□□□□ 0.02
TIMP3-201ENST00000266085 HDHD2Q9H0R4 259 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 FBXL12Q9NXK8 326 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 POMPQ9Y244 141 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 PSAT1Q9Y617 370 aa15.15■□□□□ 0.02
TIMP3-201ENST00000266085 EDDM13A0A1B0GTR0 161 aa15.14■□□□□ 0.01
TIMP3-201ENST00000266085 C2orf78A6NCI8 922 aa15.14■□□□□ 0.01
TIMP3-201ENST00000266085 KLF11O14901 512 aa15.14■□□□□ 0.01
TIMP3-201ENST00000266085 NELFEP18615 380 aaKnown RBP15.14■□□□□ 0.01
TIMP3-201ENST00000266085 DGKEP52429 567 aa15.14■□□□□ 0.01
TIMP3-201ENST00000266085 PLA2G16P53816 162 aa15.14■□□□□ 0.01
TIMP3-201ENST00000266085 GRM2Q14416 872 aa15.14■□□□□ 0.01
TIMP3-201ENST00000266085 KHDC1Q4VXA5 237 aaKnown RBP15.14■□□□□ 0.01
TIMP3-201ENST00000266085 RSBN1Q5VWQ0 802 aaPredicted RBP15.14■□□□□ 0.01
TIMP3-201ENST00000266085 CYP2U1Q7Z449 544 aa15.14■□□□□ 0.01
TIMP3-201ENST00000266085 B4GALT6Q9UBX8 382 aa15.14■□□□□ 0.01
TIMP3-201ENST00000266085 ITGB4P16144 1822 aa15.14■□□□□ 0.01
TIMP3-201ENST00000266085 MMP20O60882 483 aa15.14■□□□□ 0.01
TIMP3-201ENST00000266085 SLC25A12O75746 678 aa15.14■□□□□ 0.01
TIMP3-201ENST00000266085 VIPR1P32241 457 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms