RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 TEX28O15482 410 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 USP17L7P0C7H9 530 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 CPOXP36551 454 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 RHOAP61586 193 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 SNIP1Q8TAD8 396 aaKnown RBP11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 MYRFLQ96LU7 910 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 ZNF382Q96SR6 550 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 ARPC4-TTLL3A0A0A6YYG9 625 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 B8ZZF3 427 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 TRBC1P01850 177 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 PSKH1P11801 424 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 GRSF1Q12849 480 aaKnown RBP eCLIP11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 ADAM15Q13444 863 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 UGCGQ16739 394 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 KCTD19Q17RG1 926 aaPredicted RBP11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 TFAP2DQ7Z6R9 452 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 OR10A6Q8NH74 314 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 NPLQ9BXD5 320 aaPredicted RBP11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 MROQ9BYG7 248 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 QTRT2Q9H974 415 aaKnown RBP11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 I3L521 148 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 PROM1O43490 865 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 GSTM3P21266 225 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 NIPAL4Q0D2K0 466 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 EIF4HQ15056 248 aaKnown RBP11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 PTF1AQ7RTS3 328 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 SLC34A3Q8N130 599 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 GEMIN6Q8WXD5 167 aaKnown RBP11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 C11orf24Q96F05 449 aaPredicted RBP11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 MAGEB17A8MXT2 336 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 C9IYK1 514 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 HOXA2O43364 376 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 CYP4F2P78329 520 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 CYP20A1Q6UW02 462 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 CLHC1Q8NHS4 586 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 C1GALT1C1Q96EU7 318 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 LINGO1Q96FE5 620 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 TXNDC15Q96J42 360 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 PARK7Q99497 189 aaKnown RBP11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 LIN28AQ9H9Z2 209 aaKnown RBP11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 COL20A1Q9P218 1284 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 SNX4O95219 450 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 ACSL1P33121 698 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 EIF5AP63241 154 aaKnown RBP11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 EMX2Q04743 252 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 SMARCB1Q12824 385 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 USP30Q70CQ3 517 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 FAM35AQ86V20 835 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 OR4A15Q8NGL6 344 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 TPK1Q9H3S4 243 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 KCNE2Q9Y6J6 123 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 ICAM3P32942 547 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 MAGEA2P43356 314 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 SLC36A3Q495N2 470 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 DPY19L3Q6ZPD9 716 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 SPERTQ8NA61 448 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 AGO3Q9H9G7 860 aaKnown RBP11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 SDR39U1Q9NRG7 319 aaPredicted RBP11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 MIOSQ9NXC5 875 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 UXTQ9UBK9 157 aaPredicted RBP11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 ZNF232Q9UNY5 417 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 HSPB11Q9Y547 144 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 WDR81Q562E7 1941 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 OR14I1A6ND48 311 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 BMP1P13497 986 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 PRPS1L1P21108 318 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 IRF8Q02556 426 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 ANKRD49Q8WVL7 239 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 MUS81Q96NY9 551 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 MCCC1Q96RQ3 725 aaPredicted RBP11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 BTRCQ9Y297 605 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 PCDHGB1Q9Y5G3 927 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 SH3D21A4FU49 640 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 H0Y858 1186 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 GPR182O15218 404 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 CCNB2O95067 398 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 PGLSO95336 258 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 WSCD2Q2TBF2 565 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 DACT2Q5SW24 774 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 SYVN1Q86TM6 617 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 HAVCR1Q96D42 359 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 RETREG1Q9H6L5 497 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 XPNPEP1Q9NQW7 623 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 STOX2Q9P2F5 926 aaPredicted RBP11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 ZDHHC2Q9UIJ5 367 aa11.5□□□□□ -0.57
DNMT3A-201ENST00000264709 A0A1B0GVG6 124 aa11.49□□□□□ -0.57
DNMT3A-201ENST00000264709 SLC1A7O00341 560 aa11.49□□□□□ -0.57
DNMT3A-201ENST00000264709 NDST2P52849 883 aa11.49□□□□□ -0.57
DNMT3A-201ENST00000264709 ZNF280DQ6N043 979 aa11.49□□□□□ -0.57
DNMT3A-201ENST00000264709 GALNT7Q86SF2 657 aa11.49□□□□□ -0.57
DNMT3A-201ENST00000264709 HS6ST3Q8IZP7 471 aa11.49□□□□□ -0.57
DNMT3A-201ENST00000264709 GPRC5AQ8NFJ5 357 aa11.49□□□□□ -0.57
DNMT3A-201ENST00000264709 DNAJA4Q8WW22 397 aaPredicted RBP11.49□□□□□ -0.57
DNMT3A-201ENST00000264709 ELMO3Q96BJ8 720 aa11.49□□□□□ -0.57
DNMT3A-201ENST00000264709 AXIN1O15169 862 aa11.49□□□□□ -0.57
DNMT3A-201ENST00000264709 TRAPPC2P0DI81 140 aa11.49□□□□□ -0.57
DNMT3A-201ENST00000264709 TRAPPC2BP0DI82 140 aa11.49□□□□□ -0.57
DNMT3A-201ENST00000264709 PAFAH1B3Q15102 231 aaKnown RBP11.49□□□□□ -0.57
DNMT3A-201ENST00000264709 ATG9BQ674R7 924 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms