RNA–Protein interactions for RNA: ENST00000264638.8

CNTNAP1-201, Transcript of contactin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP1, Length 5,276 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1-201ENST00000264638 RAB30Q15771 203 aa13.14□□□□□ -0.31
CNTNAP1-201ENST00000264638 FAM171BQ6P995 826 aa13.14□□□□□ -0.31
CNTNAP1-201ENST00000264638 GPALPP1Q8IXQ4 340 aa13.14□□□□□ -0.31
CNTNAP1-201ENST00000264638 PYROXD2Q8N2H3 581 aa13.14□□□□□ -0.31
CNTNAP1-201ENST00000264638 AARSD1Q9BTE6 412 aaKnown RBP13.14□□□□□ -0.31
CNTNAP1-201ENST00000264638 SGK2Q9HBY8 427 aa13.14□□□□□ -0.31
CNTNAP1-201ENST00000264638 SIX2Q9NPC8 291 aa13.14□□□□□ -0.31
CNTNAP1-201ENST00000264638 CD320Q9NPF0 282 aa13.14□□□□□ -0.31
CNTNAP1-201ENST00000264638 IQCMA0A1B0GVH7 501 aa13.14□□□□□ -0.31
CNTNAP1-201ENST00000264638 ATP6AP2A0A1C7CYW4 349 aa13.14□□□□□ -0.31
CNTNAP1-201ENST00000264638 RBM47A0AV96 593 aaKnown RBP13.14□□□□□ -0.31
CNTNAP1-201ENST00000264638 NPEPPSL1A6NEC2 478 aa13.14□□□□□ -0.31
CNTNAP1-201ENST00000264638 SLC7A4O43246 635 aa13.14□□□□□ -0.31
CNTNAP1-201ENST00000264638 AOC2O75106 756 aa13.14□□□□□ -0.31
CNTNAP1-201ENST00000264638 ATP6AP2O75787 350 aa13.14□□□□□ -0.31
CNTNAP1-201ENST00000264638 ESR1P03372 595 aa13.14□□□□□ -0.31
CNTNAP1-201ENST00000264638 GSTT2BP0CG30 244 aa13.14□□□□□ -0.31
CNTNAP1-201ENST00000264638 BEND5Q7L4P6 421 aa13.14□□□□□ -0.31
CNTNAP1-201ENST00000264638 ACAT2Q9BWD1 397 aa13.14□□□□□ -0.31
CNTNAP1-201ENST00000264638 SLC6A15Q9H2J7 730 aa13.14□□□□□ -0.31
CNTNAP1-201ENST00000264638 ELL3Q9HB65 397 aaPredicted RBP13.14□□□□□ -0.31
CNTNAP1-201ENST00000264638 SEMA3GQ9NS98 782 aa13.14□□□□□ -0.31
CNTNAP1-201ENST00000264638 MIOSQ9NXC5 875 aa13.14□□□□□ -0.31
CNTNAP1-201ENST00000264638 MRTO4Q9UKD2 239 aaKnown RBP13.14□□□□□ -0.31
CNTNAP1-201ENST00000264638 YIPF1Q9Y548 306 aa13.14□□□□□ -0.31
CNTNAP1-201ENST00000264638 ROBO1Q9Y6N7 1651 aa13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 H3BNH8 94 aa13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 SNAPC5O75971 98 aa13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 ASMTP46597 345 aa13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 PNLIPRP1P54315 467 aa13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 PITPNAQ00169 270 aa13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 DLK2Q6UY11 383 aa13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 PSMG2Q969U7 264 aa13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 CLIP3Q96DZ5 547 aa13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 C12orf66Q96MD2 445 aa13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 GPR21Q99679 349 aa13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 GULP1Q9UBP9 304 aa13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 FADS2P1A8MWK0 482 aa13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 AGPSO00116 658 aa13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 SLC22A2O15244 555 aa13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 PTGER3P43115 390 aa13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 POLR2JP52435 117 aaKnown RBP13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 CYP4F8P98187 520 aa13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 TOMM20Q15388 145 aa13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 AHSA2Q719I0 299 aa13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 DRAXINQ8NBI3 349 aaPredicted RBP13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 IPCEF1Q8WWN9 437 aaPredicted RBP13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 CADM1Q9BY67 442 aaKnown RBP13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 EBF3Q9H4W6 596 aa13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 ANKRA2Q9H9E1 313 aa13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 GPN3Q9UHW5 284 aaPredicted RBP13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 POLR3HQ9Y535 204 aaPredicted RBP13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 ELOVL7A1L3X0 281 aa13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 TRIM64CA6NLI5 447 aa13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 MAGEB3O15480 346 aa13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 TAS2R41P59536 307 aa13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 CTU1Q7Z7A3 348 aaKnown RBP13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 PCDH19Q8TAB3 1148 aa13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 OSBPL2Q9H1P3 480 aa13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 FCF1Q9Y324 198 aaKnown RBP13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 PCDHGB3Q9Y5G1 929 aa13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 AKAP8O43823 692 aaKnown RBP13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 CD48P09326 243 aa13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 AQP4P55087 323 aa13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 CBFBQ13951 182 aa13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 CAMK1Q14012 370 aa13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 PRR23CQ6ZRP0 262 aa13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 TMEM110Q86TL2 294 aa13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 GPR65Q8IYL9 337 aa13.13□□□□□ -0.31
CNTNAP1-201ENST00000264638 GRIN2DO15399 1336 aa13.12□□□□□ -0.31
CNTNAP1-201ENST00000264638 AXIN1O15169 862 aa13.12□□□□□ -0.31
CNTNAP1-201ENST00000264638 PIAS1O75925 651 aa13.12□□□□□ -0.31
CNTNAP1-201ENST00000264638 PEPDP12955 493 aa13.12□□□□□ -0.31
CNTNAP1-201ENST00000264638 MPSTP25325 297 aa13.12□□□□□ -0.31
CNTNAP1-201ENST00000264638 ACAP2Q15057 778 aa13.12□□□□□ -0.31
CNTNAP1-201ENST00000264638 TAF1AQ15573 450 aaPredicted RBP13.12□□□□□ -0.31
CNTNAP1-201ENST00000264638 ADGRF1Q5T601 910 aa13.12□□□□□ -0.31
CNTNAP1-201ENST00000264638 GALNT5Q7Z7M9 940 aa13.12□□□□□ -0.31
CNTNAP1-201ENST00000264638 ZNF248Q8NDW4 579 aa13.12□□□□□ -0.31
CNTNAP1-201ENST00000264638 SPATA22Q8NHS9 363 aa13.12□□□□□ -0.31
CNTNAP1-201ENST00000264638 SH3RF2Q8TEC5 729 aa13.12□□□□□ -0.31
CNTNAP1-201ENST00000264638 TLCD1Q96CP7 247 aa13.12□□□□□ -0.31
CNTNAP1-201ENST00000264638 GDAP2Q9NXN4 497 aa13.12□□□□□ -0.31
CNTNAP1-201ENST00000264638 NALCNQ8IZF0 1738 aa13.12□□□□□ -0.31
CNTNAP1-201ENST00000264638 FABP12A6NFH5 140 aa13.12□□□□□ -0.31
CNTNAP1-201ENST00000264638 S100A2P29034 98 aa13.12□□□□□ -0.31
CNTNAP1-201ENST00000264638 CDH5P33151 784 aaPredicted RBP13.12□□□□□ -0.31
CNTNAP1-201ENST00000264638 BUD31P41223 144 aaPredicted RBP13.12□□□□□ -0.31
CNTNAP1-201ENST00000264638 TEAD4Q15561 434 aa13.12□□□□□ -0.31
CNTNAP1-201ENST00000264638 CPTPQ5TA50 214 aa13.12□□□□□ -0.31
CNTNAP1-201ENST00000264638 ADGRD1Q6QNK2 874 aa13.12□□□□□ -0.31
CNTNAP1-201ENST00000264638 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.12□□□□□ -0.31
CNTNAP1-201ENST00000264638 OR4A15Q8NGL6 344 aa13.12□□□□□ -0.31
CNTNAP1-201ENST00000264638 DMRTB1Q96MA1 342 aa13.12□□□□□ -0.31
CNTNAP1-201ENST00000264638 GFM1Q96RP9 751 aaKnown RBP13.12□□□□□ -0.31
CNTNAP1-201ENST00000264638 WDR55Q9H6Y2 383 aaPredicted RBP13.12□□□□□ -0.31
CNTNAP1-201ENST00000264638 SMURF2Q9HAU4 748 aa13.12□□□□□ -0.31
CNTNAP1-201ENST00000264638 TAS2R1Q9NYW7 299 aa13.12□□□□□ -0.31
CNTNAP1-201ENST00000264638 U3KQV3 271 aa13.12□□□□□ -0.31
CNTNAP1-201ENST00000264638 MID1O15344 667 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms