RNA–Protein interactions for RNA: ENST00000261875.9

HACD3-201, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HACD3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-201ENST00000261875 MED21Q13503 144 aa12.9□□□□□ -0.34
HACD3-201ENST00000261875 BLMHQ13867 455 aa12.9□□□□□ -0.34
HACD3-201ENST00000261875 STARD3Q14849 445 aa12.9□□□□□ -0.34
HACD3-201ENST00000261875 CDKN3Q16667 212 aa12.9□□□□□ -0.34
HACD3-201ENST00000261875 FAM174BQ3ZCQ3 159 aa12.9□□□□□ -0.34
HACD3-201ENST00000261875 FAM180BQ6P0A1 224 aa12.9□□□□□ -0.34
HACD3-201ENST00000261875 ELMSAN1Q6PJG2 1045 aa12.9□□□□□ -0.34
HACD3-201ENST00000261875 PHACTR4Q8IZ21 702 aa12.9□□□□□ -0.34
HACD3-201ENST00000261875 CPXM2Q8N436 756 aa12.9□□□□□ -0.34
HACD3-201ENST00000261875 GPR156Q8NFN8 814 aa12.9□□□□□ -0.34
HACD3-201ENST00000261875 PNPT1Q8TCS8 783 aaKnown RBP12.9□□□□□ -0.34
HACD3-201ENST00000261875 SELENOMQ8WWX9 145 aa12.9□□□□□ -0.34
HACD3-201ENST00000261875 LRRC58Q96CX6 371 aa12.9□□□□□ -0.34
HACD3-201ENST00000261875 EGLN2Q96KS0 407 aa12.9□□□□□ -0.34
HACD3-201ENST00000261875 P2RY13Q9BPV8 354 aa12.9□□□□□ -0.34
HACD3-201ENST00000261875 NUDT4Q9NZJ9 180 aa12.9□□□□□ -0.34
HACD3-201ENST00000261875 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.9□□□□□ -0.34
HACD3-201ENST00000261875 VPS4AQ9UN37 437 aa12.9□□□□□ -0.34
HACD3-201ENST00000261875 HS3ST2Q9Y278 367 aa12.9□□□□□ -0.34
HACD3-201ENST00000261875 AP4S1Q9Y587 144 aa12.9□□□□□ -0.34
HACD3-201ENST00000261875 KIAA1671Q9BY89 1806 aa12.9□□□□□ -0.34
HACD3-201ENST00000261875 ASPDHA6ND91 283 aa12.9□□□□□ -0.34
HACD3-201ENST00000261875 CCDC160A6NGH7 325 aa12.9□□□□□ -0.34
HACD3-201ENST00000261875 H7C0S8 307 aa12.9□□□□□ -0.34
HACD3-201ENST00000261875 MMP20O60882 483 aa12.9□□□□□ -0.34
HACD3-201ENST00000261875 SOCS5O75159 536 aa12.9□□□□□ -0.34
HACD3-201ENST00000261875 XYLBO75191 536 aa12.9□□□□□ -0.34
HACD3-201ENST00000261875 STK16O75716 305 aa12.9□□□□□ -0.34
HACD3-201ENST00000261875 EPB42P16452 691 aa12.9□□□□□ -0.34
HACD3-201ENST00000261875 NFKBIAP25963 317 aa12.9□□□□□ -0.34
HACD3-201ENST00000261875 MEF2AQ02078 507 aaPredicted RBP12.9□□□□□ -0.34
HACD3-201ENST00000261875 CYP20A1Q6UW02 462 aa12.9□□□□□ -0.34
HACD3-201ENST00000261875 LIX1Q8N485 282 aa12.9□□□□□ -0.34
HACD3-201ENST00000261875 AP2M1Q96CW1 435 aa12.9□□□□□ -0.34
HACD3-201ENST00000261875 APOLD1Q96LR9 279 aa12.9□□□□□ -0.34
HACD3-201ENST00000261875 ZDHHC3Q9NYG2 299 aa12.9□□□□□ -0.34
HACD3-201ENST00000261875 PLAGL1Q9UM63 463 aa12.9□□□□□ -0.34
HACD3-201ENST00000261875 VPS13AQ96RL7 3174 aa12.89□□□□□ -0.35
HACD3-201ENST00000261875 C16orf96A6NNT2 1141 aa12.89□□□□□ -0.35
HACD3-201ENST00000261875 FXYD1O00168 92 aa12.89□□□□□ -0.35
HACD3-201ENST00000261875 ACOT8O14734 319 aa12.89□□□□□ -0.35
HACD3-201ENST00000261875 LATO43561 262 aa12.89□□□□□ -0.35
HACD3-201ENST00000261875 ULK1O75385 1050 aa12.89□□□□□ -0.35
HACD3-201ENST00000261875 HIST1H2AGP0C0S8 130 aaPredicted RBP12.89□□□□□ -0.35
HACD3-201ENST00000261875 OR56A5P0C7T3 313 aa12.89□□□□□ -0.35
HACD3-201ENST00000261875 ADH5P11766 374 aa12.89□□□□□ -0.35
HACD3-201ENST00000261875 HIST1H2ADP20671 130 aa12.89□□□□□ -0.35
HACD3-201ENST00000261875 SOX9P48436 509 aa12.89□□□□□ -0.35
HACD3-201ENST00000261875 CDKL1Q00532 357 aa12.89□□□□□ -0.35
HACD3-201ENST00000261875 CYP51A1Q16850 503 aa12.89□□□□□ -0.35
HACD3-201ENST00000261875 ZXDCQ2QGD7 858 aaPredicted RBP12.89□□□□□ -0.35
HACD3-201ENST00000261875 PGS1Q32NB8 556 aa12.89□□□□□ -0.35
HACD3-201ENST00000261875 TTLL9Q3SXZ7 439 aa12.89□□□□□ -0.35
HACD3-201ENST00000261875 TBCELQ5QJ74 424 aa12.89□□□□□ -0.35
HACD3-201ENST00000261875 GALNT10Q86SR1 603 aa12.89□□□□□ -0.35
HACD3-201ENST00000261875 RHBDF1Q96CC6 855 aa12.89□□□□□ -0.35
HACD3-201ENST00000261875 HIST1H2AHQ96KK5 128 aa12.89□□□□□ -0.35
HACD3-201ENST00000261875 CEP295NLQ96MC4 621 aa12.89□□□□□ -0.35
HACD3-201ENST00000261875 HIST1H2AJQ99878 128 aa12.89□□□□□ -0.35
HACD3-201ENST00000261875 H2AFJQ9BTM1 129 aa12.89□□□□□ -0.35
HACD3-201ENST00000261875 THUMPD3Q9BV44 507 aaKnown RBP12.89□□□□□ -0.35
HACD3-201ENST00000261875 RIC8BQ9NVN3 520 aa12.89□□□□□ -0.35
HACD3-201ENST00000261875 GPR45Q9Y5Y3 372 aa12.89□□□□□ -0.35
HACD3-201ENST00000261875 SAP18O00422 153 aaKnown RBP12.89□□□□□ -0.35
HACD3-201ENST00000261875 BCAS2O75934 225 aaPredicted RBP12.89□□□□□ -0.35
HACD3-201ENST00000261875 IDO1P14902 403 aa12.89□□□□□ -0.35
HACD3-201ENST00000261875 GPM6BQ13491 265 aa12.89□□□□□ -0.35
HACD3-201ENST00000261875 SPANXN4Q5MJ08 99 aa12.89□□□□□ -0.35
HACD3-201ENST00000261875 RAET1GQ6H3X3 334 aa12.89□□□□□ -0.35
HACD3-201ENST00000261875 PARS2Q7L3T8 475 aaKnown RBP12.89□□□□□ -0.35
HACD3-201ENST00000261875 PDSS2Q86YH6 399 aa12.89□□□□□ -0.35
HACD3-201ENST00000261875 RGL4Q8IZJ4 473 aa12.89□□□□□ -0.35
HACD3-201ENST00000261875 CLP1Q92989 425 aaKnown RBP12.89□□□□□ -0.35
HACD3-201ENST00000261875 MOSPD1Q9UJG1 213 aa12.89□□□□□ -0.35
HACD3-201ENST00000261875 RIMKLBQ9ULI2 386 aa12.89□□□□□ -0.35
HACD3-201ENST00000261875 EFCAB14O75071 495 aa12.88□□□□□ -0.35
HACD3-201ENST00000261875 OTCP00480 354 aa12.88□□□□□ -0.35
HACD3-201ENST00000261875 LYNP07948 512 aa12.88□□□□□ -0.35
HACD3-201ENST00000261875 SLC6A2P23975 617 aa12.88□□□□□ -0.35
HACD3-201ENST00000261875 SEC13P55735 322 aa12.88□□□□□ -0.35
HACD3-201ENST00000261875 HTRA4P83105 476 aaPredicted RBP12.88□□□□□ -0.35
HACD3-201ENST00000261875 PLOD1Q02809 727 aaPredicted RBP12.88□□□□□ -0.35
HACD3-201ENST00000261875 LIPEQ05469 1076 aa12.88□□□□□ -0.35
HACD3-201ENST00000261875 TLR1Q15399 786 aa12.88□□□□□ -0.35
HACD3-201ENST00000261875 ZNF77Q15935 545 aa12.88□□□□□ -0.35
HACD3-201ENST00000261875 PROKR1Q8TCW9 393 aa12.88□□□□□ -0.35
HACD3-201ENST00000261875 FIG4Q92562 907 aa12.88□□□□□ -0.35
HACD3-201ENST00000261875 VOPP1Q96AW1 172 aa12.88□□□□□ -0.35
HACD3-201ENST00000261875 MYCBPQ99417 103 aaPredicted RBP12.88□□□□□ -0.35
HACD3-201ENST00000261875 KCTD14Q9BQ13 255 aaPredicted RBP12.88□□□□□ -0.35
HACD3-201ENST00000261875 HTATIP2Q9BUP3 242 aa12.88□□□□□ -0.35
HACD3-201ENST00000261875 OR2AG1Q9H205 316 aa12.88□□□□□ -0.35
HACD3-201ENST00000261875 ELOVL6Q9H5J4 265 aa12.88□□□□□ -0.35
HACD3-201ENST00000261875 COQ10BQ9H8M1 238 aa12.88□□□□□ -0.35
HACD3-201ENST00000261875 CNOT6Q9ULM6 557 aaKnown RBP12.88□□□□□ -0.35
HACD3-201ENST00000261875 ZNF510Q9Y2H8 683 aa12.88□□□□□ -0.35
HACD3-201ENST00000261875 TMEM98Q9Y2Y6 226 aa12.88□□□□□ -0.35
HACD3-201ENST00000261875 STX16O14662 325 aa12.88□□□□□ -0.35
HACD3-201ENST00000261875 LZTS3O60299 673 aaPredicted RBP12.88□□□□□ -0.35
HACD3-201ENST00000261875 DFNA5O60443 496 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms