RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 PRKCDQ05655 676 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 ZNF460Q14592 562 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 PCBP1Q15365 356 aaKnown RBP eCLIP14.08□□□□□ -0.16
CUX2-201ENST00000261726 GXYLT1Q4G148 440 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 KLHL26Q53HC5 615 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 HERVK_113Q902F9 699 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 RFT1Q96AA3 541 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 TBATAQ96M53 351 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 GPATCH1Q9BRR8 931 aaKnown RBP14.08□□□□□ -0.16
CUX2-201ENST00000261726 SLC39A3Q9BRY0 314 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 NMUR2Q9GZQ4 415 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 DNAAF2Q9NVR5 837 aaKnown RBP14.08□□□□□ -0.16
CUX2-201ENST00000261726 PITPNM1O00562 1244 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 TRMUO75648 421 aaKnown RBP14.08□□□□□ -0.16
CUX2-201ENST00000261726 UBXN7O94888 489 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 GADD45GO95257 159 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 RENP00797 406 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 RPS9P46781 194 aaKnown RBP14.08□□□□□ -0.16
CUX2-201ENST00000261726 HSDL1Q3SXM5 330 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 ZNF311Q5JNZ3 666 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 TMEM220Q6QAJ8 160 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 HFE2Q6ZVN8 426 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 ILDR1Q86SU0 546 aaPredicted RBP14.08□□□□□ -0.16
CUX2-201ENST00000261726 TBC1D14Q9P2M4 693 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 MEMO1Q9Y316 297 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 PCDHGB5Q9Y5G0 923 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 MAGEB17A8MXT2 336 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 TRAFD1O14545 582 aaPredicted RBP14.08□□□□□ -0.16
CUX2-201ENST00000261726 PRNPP04156 253 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 GSTT2BP0CG30 244 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 MYCLP1P12525 358 aaPredicted RBP14.08□□□□□ -0.16
CUX2-201ENST00000261726 S100A2P29034 98 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 ARCN1P48444 511 aaKnown RBP14.08□□□□□ -0.16
CUX2-201ENST00000261726 RIN1Q13671 783 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 YTHDF3Q7Z739 585 aaKnown RBP14.08□□□□□ -0.16
CUX2-201ENST00000261726 SYVN1Q86TM6 617 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 GRHL3Q8TE85 626 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 IL12RB2Q99665 862 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 DNAJC28Q9NX36 388 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 DKK3Q9UBP4 350 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 PCDHGC4Q9Y5F7 938 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 A8MUA0 341 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 OR4F21O95013 312 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 AIF1P55008 147 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 DDR1Q08345 913 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 RUNDC3AQ59EK9 446 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 RNF220Q5VTB9 566 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 ZYG11AQ6WRX3 759 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 SERPINA9Q86WD7 417 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 ZNF280BQ86YH2 543 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 CBR4Q8N4T8 237 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 PRICKLE1Q96MT3 831 aaPredicted RBP14.08□□□□□ -0.16
CUX2-201ENST00000261726 MPZL2O60487 215 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 GOT2P00505 430 aaKnown RBP14.07□□□□□ -0.16
CUX2-201ENST00000261726 TARDBPQ13148 414 aaKnown RBP eCLIP14.07□□□□□ -0.16
CUX2-201ENST00000261726 SLC26A9Q7LBE3 791 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 OTOP2Q7RTS6 562 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 P4HA3Q7Z4N8 544 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 IL31RAQ8NI17 732 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 HAS1Q92839 578 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 IL1RAPQ9NPH3 570 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 FABP12A6NFH5 140 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 TOR1BO14657 336 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 CPN2P22792 545 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 VITQ6UXI7 678 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 LRRC70Q7Z2Q7 622 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 ECHDC2Q86YB7 292 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 HMCESQ96FZ2 354 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 ZSCAN5AQ9BUG6 496 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 GBA3Q9H227 469 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 FAM83DQ9H4H8 585 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 PARPBPQ9NWS1 579 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 EIF2B4Q9UI10 523 aaKnown RBP14.07□□□□□ -0.16
CUX2-201ENST00000261726 SNX10Q9Y5X0 201 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 H3BSH0 61 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 CPNE3O75131 537 aaKnown RBP14.07□□□□□ -0.16
CUX2-201ENST00000261726 DEFA5Q01523 94 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 TEAD4Q15561 434 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 SPATA22Q8NHS9 363 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 METTL8Q9H825 291 aaKnown RBP14.07□□□□□ -0.16
CUX2-201ENST00000261726 ERVK-5Q9HDB9 667 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 ATXN10Q9UBB4 475 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 UBIAD1Q9Y5Z9 338 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 GRIN2DO15399 1336 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 DAPL1A0PJW8 107 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 NUDT17P0C025 328 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 SPIN3Q5JUX0 258 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 XYLT1Q86Y38 959 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 GJD3Q8N144 294 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 RBM15BQ8NDT2 890 aaKnown RBP14.07□□□□□ -0.16
CUX2-201ENST00000261726 TNFRSF25Q93038 417 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 ERMAPQ96PL5 475 aaPredicted RBP14.07□□□□□ -0.16
CUX2-201ENST00000261726 YIPF4Q9BSR8 244 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 SMURF1Q9HCE7 757 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 PDCD5O14737 125 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 ADAMDEC1O15204 470 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 NDST3O95803 873 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 CYP17A1P05093 508 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 SRCP12931 536 aa14.07□□□□□ -0.16
CUX2-201ENST00000261726 KCNJ5P48544 419 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms