RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 SLC24A5Q71RS6 500 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 RNF180Q86T96 592 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 HEATR4Q86WZ0 1026 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 ZDHHC21Q8IVQ6 265 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 SLC15A4Q8N697 577 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 SETD9Q8NE22 299 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 OR52J3Q8NH60 311 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 SOCS4Q8WXH5 440 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 TAMM41Q96BW9 452 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 MS4A4AQ96JQ5 239 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 PTPN18Q99952 460 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 APOL4Q9BPW4 351 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 MAGEH1Q9H213 219 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 MUC13Q9H3R2 512 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 FARSBQ9NSD9 589 aaKnown RBP4.66□□□□□ -1.66
USP44-201ENST00000258499 ATAD3AQ9NVI7 634 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.66□□□□□ -1.66
USP44-201ENST00000258499 USE1Q9NZ43 259 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 ZIM2Q9NZV7 527 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 PDP1Q9P0J1 537 aaPredicted RBP4.66□□□□□ -1.66
USP44-201ENST00000258499 VAPAQ9P0L0 249 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 DNAJB9Q9UBS3 223 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 GNPTGQ9UJJ9 305 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 PCTPQ9UKL6 214 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 FAM32AQ9Y421 112 aaKnown RBP4.66□□□□□ -1.66
USP44-201ENST00000258499 OAS3Q9Y6K5 1087 aaKnown RBP4.66□□□□□ -1.66
USP44-201ENST00000258499 ANKRD33BA6NCL7 494 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 MGAT4DA6NG13 374 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 LOC730098B7Z3J9 87 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 CLDN25C9JDP6 229 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 ZSCAN9O15535 394 aaPredicted RBP4.66□□□□□ -1.66
USP44-201ENST00000258499 NDUFS2O75306 463 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 MTX2O75431 263 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 EPN2O95208 641 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 GJB5O95377 273 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 GLUD1P00367 558 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 FGF4P08620 206 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 PTGER3P43115 390 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 ALDH3B2P48448 385 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 HLCSP50747 726 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 FOXM1Q08050 763 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 ACSM2AQ08AH3 577 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 EPS8Q12929 822 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 PWP1Q13610 501 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 INAQ16352 499 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 ACSM2BQ68CK6 577 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 RETSATQ6NUM9 610 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 TBPL2Q6SJ96 375 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 DEFB128Q7Z7B8 93 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 RBFAQ8N0V3 343 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 FRS2Q8WU20 508 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 SGCDQ92629 289 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 ZHX1-C8orf76Q96EF9 292 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 C1orf74Q96LT6 269 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 FAM210AQ96ND0 272 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 TDRD1Q9BXT4 1180 aaKnown RBP4.66□□□□□ -1.66
USP44-201ENST00000258499 LHPPQ9H008 270 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 ARNT2Q9HBZ2 717 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 KRT84Q9NSB2 600 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 TUBA8Q9NY65 449 aaPredicted RBP4.66□□□□□ -1.66
USP44-201ENST00000258499 NUDT4Q9NZJ9 180 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 HSFX1Q9UBD0 423 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 SH3BP1Q9Y3L3 701 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 ARIH1Q9Y4X5 557 aaPredicted RBP4.66□□□□□ -1.66
USP44-201ENST00000258499 TRIM17Q9Y577 477 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 SNX8Q9Y5X2 465 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 LOC100130705A0A1B0GUX0 176 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 MITFO75030 526 aaPredicted RBP4.66□□□□□ -1.66
USP44-201ENST00000258499 EEDO75530 441 aaKnown RBP4.66□□□□□ -1.66
USP44-201ENST00000258499 MATN4O95460 622 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 CD247P20963 164 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 RPIAP49247 311 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 FAM189BP81408 668 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 CYP2A13Q16696 494 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 CYBRD1Q53TN4 286 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 C6orf141Q5SZD1 244 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 GPR153Q6NV75 609 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 ANKS3Q6ZW76 656 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 SLC22A15Q8IZD6 547 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 STX19Q8N4C7 294 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 MFSD2AQ8NA29 543 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 POC5Q8NA72 575 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 VPS37AQ8NEZ2 397 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 OR2T11Q8NH01 316 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 PROKR1Q8TCW9 393 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 MYO19Q96H55 970 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 FUBP3Q96I24 572 aaKnown RBP eCLIP4.66□□□□□ -1.66
USP44-201ENST00000258499 BIRC8Q96P09 236 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 BOCQ9BWV1 1114 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 GPR62Q9BZJ7 368 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 RBM38Q9H0Z9 239 aaKnown RBP4.66□□□□□ -1.66
USP44-201ENST00000258499 ZNF556Q9HAH1 456 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 RRAGCQ9HB90 399 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 C8orf4Q9NR00 106 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 POLE4Q9NR33 117 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 NLE1Q9NVX2 485 aaPredicted RBP4.66□□□□□ -1.66
USP44-201ENST00000258499 TMEM161AQ9NX61 479 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 ASB1Q9Y576 335 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 NUP214P35658 2090 aaPredicted RBP4.65□□□□□ -1.66
USP44-201ENST00000258499 A0A1B0GVM2 712 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms