RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 PTRHD1Q6GMV3 140 aaKnown RBP11.87□□□□□ -0.51
NIP7-201ENST00000254940 SNX31Q8N9S9 440 aa11.87□□□□□ -0.51
NIP7-201ENST00000254940 ZBTB44Q8NCP5 570 aa11.87□□□□□ -0.51
NIP7-201ENST00000254940 ATOH1Q92858 354 aaPredicted RBP11.87□□□□□ -0.51
NIP7-201ENST00000254940 PTCD3Q96EY7 689 aaKnown RBP11.87□□□□□ -0.51
NIP7-201ENST00000254940 KLHDC7BQ96G42 594 aa11.87□□□□□ -0.51
NIP7-201ENST00000254940 GPR21Q99679 349 aa11.87□□□□□ -0.51
NIP7-201ENST00000254940 CARS2Q9HA77 564 aaKnown RBP11.87□□□□□ -0.51
NIP7-201ENST00000254940 DNAJC28Q9NX36 388 aa11.87□□□□□ -0.51
NIP7-201ENST00000254940 ZDHHC3Q9NYG2 299 aa11.87□□□□□ -0.51
NIP7-201ENST00000254940 SUFUQ9UMX1 484 aa11.87□□□□□ -0.51
NIP7-201ENST00000254940 ASB1Q9Y576 335 aa11.87□□□□□ -0.51
NIP7-201ENST00000254940 ST14Q9Y5Y6 855 aa11.87□□□□□ -0.51
NIP7-201ENST00000254940 A8MT66 165 aa11.86□□□□□ -0.51
NIP7-201ENST00000254940 CAPN14A8MX76 684 aa11.86□□□□□ -0.51
NIP7-201ENST00000254940 CACNB4O00305 520 aaPredicted RBP11.86□□□□□ -0.51
NIP7-201ENST00000254940 CDC7O00311 574 aa11.86□□□□□ -0.51
NIP7-201ENST00000254940 LTA4HP09960 611 aaKnown RBP11.86□□□□□ -0.51
NIP7-201ENST00000254940 C7P10643 843 aa11.86□□□□□ -0.51
NIP7-201ENST00000254940 CHRM3P20309 590 aa11.86□□□□□ -0.51
NIP7-201ENST00000254940 AK4P27144 223 aaPredicted RBP11.86□□□□□ -0.51
NIP7-201ENST00000254940 CD38P28907 300 aa11.86□□□□□ -0.51
NIP7-201ENST00000254940 FAM83EQ2M2I3 478 aa11.86□□□□□ -0.51
NIP7-201ENST00000254940 ZNF547Q8IVP9 402 aa11.86□□□□□ -0.51
NIP7-201ENST00000254940 CADM4Q8NFZ8 388 aa11.86□□□□□ -0.51
NIP7-201ENST00000254940 RAB3IL1Q8TBN0 382 aa11.86□□□□□ -0.51
NIP7-201ENST00000254940 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.86□□□□□ -0.51
NIP7-201ENST00000254940 NSUN5Q96P11 429 aaKnown RBP11.86□□□□□ -0.51
NIP7-201ENST00000254940 TEX101Q9BY14 249 aa11.86□□□□□ -0.51
NIP7-201ENST00000254940 CLPBQ9H078 707 aa11.86□□□□□ -0.51
NIP7-201ENST00000254940 OSGEPL1Q9H4B0 414 aa11.86□□□□□ -0.51
NIP7-201ENST00000254940 IL21RQ9HBE5 538 aa11.86□□□□□ -0.51
NIP7-201ENST00000254940 PHPT1Q9NRX4 125 aaPredicted RBP11.86□□□□□ -0.51
NIP7-201ENST00000254940 GEMIN8Q9NWZ8 242 aaKnown RBP11.86□□□□□ -0.51
NIP7-201ENST00000254940 BAIAP2L1Q9UHR4 511 aa11.86□□□□□ -0.51
NIP7-201ENST00000254940 PSMD13Q9UNM6 376 aa11.86□□□□□ -0.51
NIP7-201ENST00000254940 ANKRD6Q9Y2G4 727 aa11.86□□□□□ -0.51
NIP7-201ENST00000254940 TNRC6BQ9UPQ9 1833 aaKnown RBP11.86□□□□□ -0.51
NIP7-201ENST00000254940 UBXN8O00124 270 aa11.86□□□□□ -0.51
NIP7-201ENST00000254940 UBFD1O14562 309 aaKnown RBP11.86□□□□□ -0.51
NIP7-201ENST00000254940 SGTAO43765 313 aa11.86□□□□□ -0.51
NIP7-201ENST00000254940 SNX2O60749 519 aa11.86□□□□□ -0.51
NIP7-201ENST00000254940 SKAP2O75563 359 aaPredicted RBP11.86□□□□□ -0.51
NIP7-201ENST00000254940 RHOBTB1O94844 696 aa11.86□□□□□ -0.51
NIP7-201ENST00000254940 WISP3O95389 354 aaPredicted RBP11.86□□□□□ -0.51
NIP7-201ENST00000254940 CEACAM5P06731 702 aa11.86□□□□□ -0.51
NIP7-201ENST00000254940 MYCLP1P12525 358 aaPredicted RBP11.86□□□□□ -0.51
NIP7-201ENST00000254940 ZNF37AP17032 561 aaPredicted RBP11.86□□□□□ -0.51
NIP7-201ENST00000254940 FDXRP22570 491 aa11.86□□□□□ -0.51
NIP7-201ENST00000254940 RPL10P27635 214 aaKnown RBP11.86□□□□□ -0.51
NIP7-201ENST00000254940 SPDYAQ5MJ70 313 aa11.86□□□□□ -0.51
NIP7-201ENST00000254940 ADAMTSL4Q6UY14 1074 aa11.86□□□□□ -0.51
NIP7-201ENST00000254940 CCDC91Q7Z6B0 441 aa11.86□□□□□ -0.51
NIP7-201ENST00000254940 RAVER1Q8IY67 606 aaKnown RBP11.86□□□□□ -0.51
NIP7-201ENST00000254940 C1orf216Q8TAB5 229 aa11.86□□□□□ -0.51
NIP7-201ENST00000254940 CLPTM1LQ96KA5 538 aa11.86□□□□□ -0.51
NIP7-201ENST00000254940 NRTNQ99748 197 aa11.86□□□□□ -0.51
NIP7-201ENST00000254940 MRPL57Q9BQC6 102 aaKnown RBP11.86□□□□□ -0.51
NIP7-201ENST00000254940 CCDC106Q9BWC9 280 aa11.86□□□□□ -0.51
NIP7-201ENST00000254940 WWP1Q9H0M0 922 aa11.86□□□□□ -0.51
NIP7-201ENST00000254940 TMEM168Q9H0V1 697 aa11.86□□□□□ -0.51
NIP7-201ENST00000254940 CDH19Q9H159 772 aa11.86□□□□□ -0.51
NIP7-201ENST00000254940 TAS2R1Q9NYW7 299 aa11.86□□□□□ -0.51
NIP7-201ENST00000254940 NCKIPSDQ9NZQ3 722 aa11.86□□□□□ -0.51
NIP7-201ENST00000254940 SNX11Q9Y5W9 270 aa11.86□□□□□ -0.51
NIP7-201ENST00000254940 CFAP20Q9Y6A4 193 aaKnown RBP11.86□□□□□ -0.51
NIP7-201ENST00000254940 ZFC3H1O60293 1989 aaKnown RBP11.86□□□□□ -0.51
NIP7-201ENST00000254940 TRBV5-4A0A0C4DH59 114 aa11.85□□□□□ -0.51
NIP7-201ENST00000254940 MYF5P13349 255 aa11.85□□□□□ -0.51
NIP7-201ENST00000254940 ATP1B2P14415 290 aaPredicted RBP11.85□□□□□ -0.51
NIP7-201ENST00000254940 CD1DP15813 335 aa11.85□□□□□ -0.51
NIP7-201ENST00000254940 TRIM23P36406 574 aa11.85□□□□□ -0.51
NIP7-201ENST00000254940 TTPAP49638 278 aa11.85□□□□□ -0.51
NIP7-201ENST00000254940 PFN3P60673 137 aa11.85□□□□□ -0.51
NIP7-201ENST00000254940 BNC1Q01954 994 aa11.85□□□□□ -0.51
NIP7-201ENST00000254940 PDAP1Q13442 181 aaKnown RBP11.85□□□□□ -0.51
NIP7-201ENST00000254940 FZD2Q14332 565 aa11.85□□□□□ -0.51
NIP7-201ENST00000254940 ALG11Q2TAA5 492 aa11.85□□□□□ -0.51
NIP7-201ENST00000254940 KIF19Q2TAC6 998 aa11.85□□□□□ -0.51
NIP7-201ENST00000254940 WDR45BQ5MNZ6 344 aa11.85□□□□□ -0.51
NIP7-201ENST00000254940 SH2D4BQ5SQS7 431 aa11.85□□□□□ -0.51
NIP7-201ENST00000254940 CLEC6AQ6EIG7 209 aa11.85□□□□□ -0.51
NIP7-201ENST00000254940 FAM83HQ6ZRV2 1179 aaPredicted RBP11.85□□□□□ -0.51
NIP7-201ENST00000254940 ZNF765Q7L2R6 523 aa11.85□□□□□ -0.51
NIP7-201ENST00000254940 DCBLD1Q8N8Z6 715 aa11.85□□□□□ -0.51
NIP7-201ENST00000254940 EEF1AKMT1Q8WVE0 214 aa11.85□□□□□ -0.51
NIP7-201ENST00000254940 NELL1Q92832 810 aa11.85□□□□□ -0.51
NIP7-201ENST00000254940 AARSD1Q9BTE6 412 aaKnown RBP11.85□□□□□ -0.51
NIP7-201ENST00000254940 GTPBP2Q9BX10 602 aaKnown RBP11.85□□□□□ -0.51
NIP7-201ENST00000254940 CADM1Q9BY67 442 aaKnown RBP11.85□□□□□ -0.51
NIP7-201ENST00000254940 DRC3Q9H069 523 aa11.85□□□□□ -0.51
NIP7-201ENST00000254940 TXLNGQ9NUQ3 528 aa11.85□□□□□ -0.51
NIP7-201ENST00000254940 UTP6Q9NYH9 597 aaKnown RBP11.85□□□□□ -0.51
NIP7-201ENST00000254940 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.85□□□□□ -0.51
NIP7-201ENST00000254940 RIMKLBQ9ULI2 386 aa11.85□□□□□ -0.51
NIP7-201ENST00000254940 PTGDR2Q9Y5Y4 395 aa11.85□□□□□ -0.51
NIP7-201ENST00000254940 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.85□□□□□ -0.51
NIP7-201ENST00000254940 A0A087X1B8 175 aa11.85□□□□□ -0.51
NIP7-201ENST00000254940 CCDC163A0A0D9SF12 145 aa11.85□□□□□ -0.51
NIP7-201ENST00000254940 A0A1W2PR77 199 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms