RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 SOCS2O14508 198 aa18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 CBX2Q14781 532 aaPredicted RBP18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 SGO1Q5FBB7 561 aa18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 LCN8Q6JVE9 175 aa18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 NANOGP8Q6NSW7 305 aa18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 CYP20A1Q6UW02 462 aa18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 TPRG1Q6ZUI0 275 aa18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 Q6ZVU0 165 aa18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 DET1Q7L5Y6 550 aa18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 ERMP1Q7Z2K6 904 aa18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 TSPEARQ8WU66 669 aa18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 ING5Q8WYH8 240 aa18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 ZNF597Q96LX8 424 aa18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 KCTD14Q9BQ13 255 aaPredicted RBP18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 EFHD1Q9BUP0 239 aa18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 CD244Q9BZW8 370 aa18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 FAM192AQ9GZU8 254 aa18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 NKX2-4Q9H2Z4 354 aa18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 NANOGQ9H9S0 305 aa18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 PFDN4Q9NQP4 134 aa18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 HEBP1Q9NRV9 189 aa18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 TDP1Q9NUW8 608 aa18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 ARMC1Q9NVT9 282 aa18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 ACTR3BQ9P1U1 418 aa18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 DPP7Q9UHL4 492 aa18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 CNOT11Q9UKZ1 510 aaKnown RBP18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 ANGPTL3Q9Y5C1 460 aa18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 NELFEP18615 380 aaKnown RBP18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 DDX6P26196 483 aaKnown RBP eCLIP18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 HMGCS1Q01581 520 aa18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 BNIP2Q12982 314 aa18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 GPR33Q49SQ1 333 aa18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 ZNF707Q96C28 371 aaPredicted RBP18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 ECHDC3Q96DC8 303 aa18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 ZSWIM3Q96MP5 696 aa18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 LYSMD1Q96S90 227 aa18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 CCT7Q99832 543 aa18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 OPTCQ9UBM4 332 aa18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 HS3ST2Q9Y278 367 aa18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 RNF11Q9Y3C5 154 aa18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 CCL27Q9Y4X3 112 aa18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 KRT87PA6NCN2 255 aa18.33■□□□□ 0.53
PDLIM4-201ENST00000253754 AQP12BA6NM10 295 aa18.33■□□□□ 0.53
PDLIM4-201ENST00000253754 INPP4BO15327 924 aa18.33■□□□□ 0.53
PDLIM4-201ENST00000253754 CCR7P32248 378 aa18.33■□□□□ 0.53
PDLIM4-201ENST00000253754 NRIP1P48552 1158 aa18.33■□□□□ 0.53
PDLIM4-201ENST00000253754 HSPA13P48723 471 aa18.33■□□□□ 0.53
PDLIM4-201ENST00000253754 RPL38P63173 70 aaKnown RBP18.33■□□□□ 0.53
PDLIM4-201ENST00000253754 EMX2Q04743 252 aa18.33■□□□□ 0.53
PDLIM4-201ENST00000253754 PRKCQQ04759 706 aa18.33■□□□□ 0.53
PDLIM4-201ENST00000253754 PRKG2Q13237 762 aa18.33■□□□□ 0.53
PDLIM4-201ENST00000253754 SELPLGQ14242 412 aa18.33■□□□□ 0.53
PDLIM4-201ENST00000253754 PTGR1Q14914 329 aa18.33■□□□□ 0.53
PDLIM4-201ENST00000253754 SLC44A4Q53GD3 710 aa18.33■□□□□ 0.53
PDLIM4-201ENST00000253754 LYPLAL1Q5VWZ2 237 aa18.33■□□□□ 0.53
PDLIM4-201ENST00000253754 PPP2R2DQ66LE6 453 aa18.33■□□□□ 0.53
PDLIM4-201ENST00000253754 AQP12AQ8IXF9 295 aa18.33■□□□□ 0.53
PDLIM4-201ENST00000253754 ADGRG5Q8IZF4 528 aa18.33■□□□□ 0.53
PDLIM4-201ENST00000253754 CBARPQ8N350 705 aaPredicted RBP18.33■□□□□ 0.53
PDLIM4-201ENST00000253754 CENPKQ9BS16 269 aa18.33■□□□□ 0.53
PDLIM4-201ENST00000253754 SLC2A11Q9BYW1 496 aa18.33■□□□□ 0.53
PDLIM4-201ENST00000253754 KLQ9UEF7 1012 aa18.33■□□□□ 0.53
PDLIM4-201ENST00000253754 ANKRD28O15084 1053 aa18.33■□□□□ 0.52
PDLIM4-201ENST00000253754 OR6B1O95007 311 aa18.33■□□□□ 0.52
PDLIM4-201ENST00000253754 C1SP09871 688 aa18.33■□□□□ 0.52
PDLIM4-201ENST00000253754 ARHGEF7Q14155 803 aa18.33■□□□□ 0.52
PDLIM4-201ENST00000253754 PRSS36Q5K4E3 855 aa18.33■□□□□ 0.52
PDLIM4-201ENST00000253754 TMC5Q6UXY8 1006 aa18.33■□□□□ 0.52
PDLIM4-201ENST00000253754 USP45Q70EL2 814 aa18.33■□□□□ 0.52
PDLIM4-201ENST00000253754 RALGPS2Q86X27 583 aaPredicted RBP18.33■□□□□ 0.52
PDLIM4-201ENST00000253754 LEMD2Q8NC56 503 aa18.33■□□□□ 0.52
PDLIM4-201ENST00000253754 PIP4K2CQ8TBX8 421 aa18.33■□□□□ 0.52
PDLIM4-201ENST00000253754 PPM1MQ96MI6 270 aa18.33■□□□□ 0.52
PDLIM4-201ENST00000253754 TRIM15Q9C019 465 aa18.33■□□□□ 0.52
PDLIM4-201ENST00000253754 B4GALT6Q9UBX8 382 aa18.33■□□□□ 0.52
PDLIM4-201ENST00000253754 V9GYQ6 96 aa18.33■□□□□ 0.52
PDLIM4-201ENST00000253754 ATG2AQ2TAZ0 1938 aa18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 AGAP14A8MT82 685 aa18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 PDLIM1O00151 329 aa18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 MTX2O75431 263 aa18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 SLC2A4P14672 509 aa18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 ATP6V1B1P15313 513 aa18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 NSG1P42857 185 aa18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 POLE2P56282 527 aa18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 INPP5AQ14642 412 aa18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 CYP51A1Q16850 503 aa18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 CNPY1Q3B7I2 92 aa18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 ZBTB49Q6ZSB9 765 aa18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 EPHX4Q8IUS5 362 aa18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 CHERPQ8IWX8 916 aaKnown RBP18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 ANKFN1Q8N957 763 aa18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 COPS8Q99627 209 aa18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 PRPF18Q99633 342 aaKnown RBP18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 GDF15Q99988 308 aa18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 SPATA16Q9BXB7 569 aa18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 LINC00597Q9H2U6 94 aa18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 ZDHHC3Q9NYG2 299 aa18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 TMPRSS11EQ9UL52 423 aa18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 ZNF106Q9H2Y7 1883 aaKnown RBP18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms