RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 HIST1H2AGP0C0S8 130 aaPredicted RBP12.65□□□□□ -0.38
LSM8-201ENST00000249299 MTHFD2P13995 350 aa12.65□□□□□ -0.38
LSM8-201ENST00000249299 HIST1H2ADP20671 130 aa12.65□□□□□ -0.38
LSM8-201ENST00000249299 BCKDHBP21953 392 aa12.65□□□□□ -0.38
LSM8-201ENST00000249299 ACADLP28330 430 aa12.65□□□□□ -0.38
LSM8-201ENST00000249299 ALDH3A1P30838 453 aa12.65□□□□□ -0.38
LSM8-201ENST00000249299 HSD17B2P37059 387 aa12.65□□□□□ -0.38
LSM8-201ENST00000249299 GLRBP48167 497 aa12.65□□□□□ -0.38
LSM8-201ENST00000249299 PGGT1BP53609 377 aa12.65□□□□□ -0.38
LSM8-201ENST00000249299 ALDH18A1P54886 795 aaKnown RBP12.65□□□□□ -0.38
LSM8-201ENST00000249299 GUCY1A3Q02108 690 aa12.65□□□□□ -0.38
LSM8-201ENST00000249299 GALNT1Q10472 559 aaPredicted RBP12.65□□□□□ -0.38
LSM8-201ENST00000249299 FZD2Q14332 565 aa12.65□□□□□ -0.38
LSM8-201ENST00000249299 PCLAFQ15004 111 aa12.65□□□□□ -0.38
LSM8-201ENST00000249299 TGFBIQ15582 683 aa12.65□□□□□ -0.38
LSM8-201ENST00000249299 OR4D1Q15615 310 aa12.65□□□□□ -0.38
LSM8-201ENST00000249299 ALG11Q2TAA5 492 aa12.65□□□□□ -0.38
LSM8-201ENST00000249299 LYSMD4Q5XG99 296 aa12.65□□□□□ -0.38
LSM8-201ENST00000249299 CAPRIN2Q6IMN6 1127 aaKnown RBP12.65□□□□□ -0.38
LSM8-201ENST00000249299 ABRAXAS1Q6UWZ7 409 aa12.65□□□□□ -0.38
LSM8-201ENST00000249299 RAB44Q7Z6P3 723 aaPredicted RBP12.65□□□□□ -0.38
LSM8-201ENST00000249299 PDZD3Q86UT5 571 aa12.65□□□□□ -0.38
LSM8-201ENST00000249299 TAX1BP1Q86VP1 789 aa12.65□□□□□ -0.38
LSM8-201ENST00000249299 SLC22A18ASQ8N1D0 253 aa12.65□□□□□ -0.38
LSM8-201ENST00000249299 SPATA6LQ8N4H0 392 aa12.65□□□□□ -0.38
LSM8-201ENST00000249299 PDPRQ8NCN5 879 aa12.65□□□□□ -0.38
LSM8-201ENST00000249299 MGARPQ8TDB4 240 aa12.65□□□□□ -0.38
LSM8-201ENST00000249299 LRRC8CQ8TDW0 803 aa12.65□□□□□ -0.38
LSM8-201ENST00000249299 ATL1Q8WXF7 558 aa12.65□□□□□ -0.38
LSM8-201ENST00000249299 OR1E3Q8WZA6 343 aa12.65□□□□□ -0.38
LSM8-201ENST00000249299 ZNF75CPQ92670 426 aaPredicted RBP12.65□□□□□ -0.38
LSM8-201ENST00000249299 HIST1H2AHQ96KK5 128 aa12.65□□□□□ -0.38
LSM8-201ENST00000249299 SLC6A18Q96N87 628 aa12.65□□□□□ -0.38
LSM8-201ENST00000249299 HIST1H2AJQ99878 128 aa12.65□□□□□ -0.38
LSM8-201ENST00000249299 MYOCQ99972 504 aa12.65□□□□□ -0.38
LSM8-201ENST00000249299 PAIP2Q9BPZ3 127 aaKnown RBP12.65□□□□□ -0.38
LSM8-201ENST00000249299 H2AFJQ9BTM1 129 aa12.65□□□□□ -0.38
LSM8-201ENST00000249299 MANSC1Q9H8J5 431 aa12.65□□□□□ -0.38
LSM8-201ENST00000249299 CARS2Q9HA77 564 aaKnown RBP12.65□□□□□ -0.38
LSM8-201ENST00000249299 CYP4F12Q9HCS2 524 aa12.65□□□□□ -0.38
LSM8-201ENST00000249299 NCKIPSDQ9NZQ3 722 aa12.65□□□□□ -0.38
LSM8-201ENST00000249299 CPSF2Q9P2I0 782 aaKnown RBP12.65□□□□□ -0.38
LSM8-201ENST00000249299 HEBP2Q9Y5Z4 205 aa12.65□□□□□ -0.38
LSM8-201ENST00000249299 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.64□□□□□ -0.39
LSM8-201ENST00000249299 A0A1B0GTW7 788 aa12.64□□□□□ -0.39
LSM8-201ENST00000249299 TMEM114B3SHH9 223 aa12.64□□□□□ -0.39
LSM8-201ENST00000249299 TNFRSF10AO00220 468 aa12.64□□□□□ -0.39
LSM8-201ENST00000249299 CDC7O00311 574 aa12.64□□□□□ -0.39
LSM8-201ENST00000249299 FFAR2O15552 330 aa12.64□□□□□ -0.39
LSM8-201ENST00000249299 S100BP04271 92 aaPredicted RBP12.64□□□□□ -0.39
LSM8-201ENST00000249299 NEFHP12036 1026 aa12.64□□□□□ -0.39
LSM8-201ENST00000249299 IMPDH1P20839 514 aa12.64□□□□□ -0.39
LSM8-201ENST00000249299 MAP4P27816 1152 aaKnown RBP12.64□□□□□ -0.39
LSM8-201ENST00000249299 NDUFS1P28331 727 aa12.64□□□□□ -0.39
LSM8-201ENST00000249299 LSP1P33241 339 aa12.64□□□□□ -0.39
LSM8-201ENST00000249299 GGT5P36269 586 aa12.64□□□□□ -0.39
LSM8-201ENST00000249299 GNPDA1P46926 289 aa12.64□□□□□ -0.39
LSM8-201ENST00000249299 KCNC1P48547 511 aa12.64□□□□□ -0.39
LSM8-201ENST00000249299 ILF3Q12906 894 aaKnown RBP eCLIP12.64□□□□□ -0.39
LSM8-201ENST00000249299 PLK5Q496M5 336 aa12.64□□□□□ -0.39
LSM8-201ENST00000249299 PEAR1Q5VY43 1037 aaPredicted RBP12.64□□□□□ -0.39
LSM8-201ENST00000249299 SULT1C3Q6IMI6 304 aa12.64□□□□□ -0.39
LSM8-201ENST00000249299 TSSK4Q6SA08 328 aa12.64□□□□□ -0.39
LSM8-201ENST00000249299 XKR5Q6UX68 686 aa12.64□□□□□ -0.39
LSM8-201ENST00000249299 FRA10AC1Q70Z53 315 aa12.64□□□□□ -0.39
LSM8-201ENST00000249299 CHST15Q7LFX5 561 aaPredicted RBP12.64□□□□□ -0.39
LSM8-201ENST00000249299 VRK3Q8IV63 474 aa12.64□□□□□ -0.39
LSM8-201ENST00000249299 TMEFF1Q8IYR6 380 aa12.64□□□□□ -0.39
LSM8-201ENST00000249299 GPBAR1Q8TDU6 330 aa12.64□□□□□ -0.39
LSM8-201ENST00000249299 ZFPM2Q8WW38 1151 aa12.64□□□□□ -0.39
LSM8-201ENST00000249299 L3HYPDHQ96EM0 354 aa12.64□□□□□ -0.39
LSM8-201ENST00000249299 KLC4Q9NSK0 619 aa12.64□□□□□ -0.39
LSM8-201ENST00000249299 THAP1Q9NVV9 213 aa12.64□□□□□ -0.39
LSM8-201ENST00000249299 SLC23A2Q9UGH3 650 aa12.64□□□□□ -0.39
LSM8-201ENST00000249299 INVSQ9Y283 1065 aa12.64□□□□□ -0.39
LSM8-201ENST00000249299 CA5BQ9Y2D0 317 aa12.64□□□□□ -0.39
LSM8-201ENST00000249299 GPSM3Q9Y4H4 160 aa12.64□□□□□ -0.39
LSM8-201ENST00000249299 NPEPPSL1A6NEC2 478 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 OR5K4A6NMS3 321 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 A8MT66 165 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 PRR33A8MZF0 331 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 KDM1AO60341 852 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 NPHS1O60500 1241 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 SNX2O60749 519 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 GPR37L1O60883 481 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 CSF2P04141 144 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 ANXA5P08758 320 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 SLC35G4P0C7Q5 338 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 SP9P0CG40 484 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 ACP5P13686 325 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 GFAPP14136 432 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 SLC2A4P14672 509 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 NME1P15531 152 aaKnown RBP12.63□□□□□ -0.39
LSM8-201ENST00000249299 GMPRP36959 345 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 RPIAP49247 311 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 NXPH1P58417 271 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 HERVK_113P63132 956 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 EIF2B5Q13144 721 aaKnown RBP12.63□□□□□ -0.39
LSM8-201ENST00000249299 NFE2L1Q14494 772 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 ARHGAP19Q14CB8 494 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms