RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 FKTNO75072 461 aa19.16■□□□□ 0.66
CDC42EP1-201ENST00000249014 CLIC3O95833 236 aa19.16■□□□□ 0.66
CDC42EP1-201ENST00000249014 ALDH3B2P48448 385 aa19.16■□□□□ 0.66
CDC42EP1-201ENST00000249014 DYNC1I2Q13409 638 aaKnown RBP19.16■□□□□ 0.66
CDC42EP1-201ENST00000249014 PWP1Q13610 501 aa19.16■□□□□ 0.66
CDC42EP1-201ENST00000249014 MPPE1Q53F39 396 aa19.16■□□□□ 0.66
CDC42EP1-201ENST00000249014 RFLNAQ6ZTI6 216 aa19.16■□□□□ 0.66
CDC42EP1-201ENST00000249014 UBTD2Q8WUN7 234 aa19.16■□□□□ 0.66
CDC42EP1-201ENST00000249014 LYSMD1Q96S90 227 aa19.16■□□□□ 0.66
CDC42EP1-201ENST00000249014 CHID1Q9BWS9 393 aa19.16■□□□□ 0.66
CDC42EP1-201ENST00000249014 K7EPI3 171 aa19.15■□□□□ 0.66
CDC42EP1-201ENST00000249014 SRCP12931 536 aa19.15■□□□□ 0.66
CDC42EP1-201ENST00000249014 CDH2P19022 906 aaPredicted RBP19.15■□□□□ 0.66
CDC42EP1-201ENST00000249014 MPP7Q5T2T1 576 aa19.15■□□□□ 0.66
CDC42EP1-201ENST00000249014 LRRC66Q68CR7 880 aa19.15■□□□□ 0.66
CDC42EP1-201ENST00000249014 PRR23BQ6ZRT6 265 aa19.15■□□□□ 0.66
CDC42EP1-201ENST00000249014 CHCHD4Q8N4Q1 142 aa19.15■□□□□ 0.66
CDC42EP1-201ENST00000249014 MRPS31Q92665 395 aaKnown RBP19.15■□□□□ 0.66
CDC42EP1-201ENST00000249014 NSMCE2Q96MF7 247 aa19.15■□□□□ 0.66
CDC42EP1-201ENST00000249014 RNF145Q96MT1 663 aa19.15■□□□□ 0.66
CDC42EP1-201ENST00000249014 NTMT1Q9BV86 223 aa19.15■□□□□ 0.66
CDC42EP1-201ENST00000249014 SMG9Q9H0W8 520 aaKnown RBP19.15■□□□□ 0.66
CDC42EP1-201ENST00000249014 GPBP1L1Q9HC44 474 aaPredicted RBP19.15■□□□□ 0.66
CDC42EP1-201ENST00000249014 ZFP14Q9HCL3 533 aa19.15■□□□□ 0.66
CDC42EP1-201ENST00000249014 SLC8A2Q9UPR5 921 aa19.15■□□□□ 0.66
CDC42EP1-201ENST00000249014 DOCK6Q96HP0 2047 aa19.15■□□□□ 0.66
CDC42EP1-201ENST00000249014 IFRD1O00458 451 aaPredicted RBP19.15■□□□□ 0.66
CDC42EP1-201ENST00000249014 RGS14O43566 566 aa19.15■□□□□ 0.66
CDC42EP1-201ENST00000249014 DFNA5O60443 496 aa19.15■□□□□ 0.66
CDC42EP1-201ENST00000249014 SLC7A9P82251 487 aa19.15■□□□□ 0.66
CDC42EP1-201ENST00000249014 B4GALNT1Q00973 533 aa19.15■□□□□ 0.66
CDC42EP1-201ENST00000249014 SGO1Q5FBB7 561 aa19.15■□□□□ 0.66
CDC42EP1-201ENST00000249014 TMC8Q8IU68 726 aa19.15■□□□□ 0.66
CDC42EP1-201ENST00000249014 RIMKLAQ8IXN7 391 aa19.15■□□□□ 0.66
CDC42EP1-201ENST00000249014 HM13Q8TCT9 377 aa19.15■□□□□ 0.66
CDC42EP1-201ENST00000249014 FBXL20Q96IG2 436 aa19.15■□□□□ 0.66
CDC42EP1-201ENST00000249014 RDH14Q9HBH5 336 aa19.15■□□□□ 0.66
CDC42EP1-201ENST00000249014 PCDH10Q9P2E7 1040 aa19.15■□□□□ 0.66
CDC42EP1-201ENST00000249014 MAGEL2Q9UJ55 1249 aa19.15■□□□□ 0.66
CDC42EP1-201ENST00000249014 ZNF490Q9ULM2 529 aaPredicted RBP19.15■□□□□ 0.66
CDC42EP1-201ENST00000249014 TRIM17Q9Y577 477 aa19.15■□□□□ 0.66
CDC42EP1-201ENST00000249014 ULK1O75385 1050 aa19.14■□□□□ 0.65
CDC42EP1-201ENST00000249014 LDLRP01130 860 aa19.14■□□□□ 0.65
CDC42EP1-201ENST00000249014 LHCGRP22888 699 aa19.14■□□□□ 0.65
CDC42EP1-201ENST00000249014 PCSK6P29122 969 aa19.14■□□□□ 0.65
CDC42EP1-201ENST00000249014 PTSQ03393 145 aa19.14■□□□□ 0.65
CDC42EP1-201ENST00000249014 ARHGEF7Q14155 803 aa19.14■□□□□ 0.65
CDC42EP1-201ENST00000249014 FAM174BQ3ZCQ3 159 aa19.14■□□□□ 0.65
CDC42EP1-201ENST00000249014 TBPL2Q6SJ96 375 aa19.14■□□□□ 0.65
CDC42EP1-201ENST00000249014 TRIM46Q7Z4K8 759 aa19.14■□□□□ 0.65
CDC42EP1-201ENST00000249014 RGL4Q8IZJ4 473 aa19.14■□□□□ 0.65
CDC42EP1-201ENST00000249014 CMTM8Q8IZV2 173 aa19.14■□□□□ 0.65
CDC42EP1-201ENST00000249014 BPIFB1Q8TDL5 484 aa19.14■□□□□ 0.65
CDC42EP1-201ENST00000249014 CYGBQ8WWM9 190 aa19.14■□□□□ 0.65
CDC42EP1-201ENST00000249014 SLC13A3Q8WWT9 602 aa19.14■□□□□ 0.65
CDC42EP1-201ENST00000249014 SCRN2Q96FV2 425 aa19.14■□□□□ 0.65
CDC42EP1-201ENST00000249014 LMLNQ96KR4 655 aa19.14■□□□□ 0.65
CDC42EP1-201ENST00000249014 ZNF583Q96ND8 569 aa19.14■□□□□ 0.65
CDC42EP1-201ENST00000249014 OGDHLQ9ULD0 1010 aa19.14■□□□□ 0.65
CDC42EP1-201ENST00000249014 LTBP2Q14767 1821 aa19.14■□□□□ 0.65
CDC42EP1-201ENST00000249014 TGM5O43548 720 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 EBLN1P0CF75 366 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 EPB42P16452 691 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 EPORP19235 508 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 SLC5A2P31639 672 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 NSG1P42857 185 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 LAMA3Q16787 3333 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 ATP13A5Q4VNC0 1218 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 TPRG1Q6ZUI0 275 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 ZNF786Q8N393 782 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 LIX1Q8N485 282 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 MAGEE2Q8TD90 523 aaPredicted RBP19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 GTF2H4Q92759 462 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 ECHDC3Q96DC8 303 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 VPS50Q96JG6 964 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 TRPS1Q9UHF7 1281 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 ZNF639Q9UID6 485 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 MBD1Q9UIS9 605 aaPredicted RBP19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 EIF3LQ9Y262 564 aaKnown RBP19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 A0A1B0GVG6 124 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 A0A1W2PRU2 124 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 SLC28A1O00337 649 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 MANBAO00462 879 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 LILRB3O75022 631 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 SEC24DO94855 1032 aaPredicted RBP19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 KCNH1O95259 989 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 C7P10643 843 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 CDH1P12830 882 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 GGT1P19440 569 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 HLA-FP30511 346 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 CCR7P32248 378 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 CA8P35219 290 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 TUBA4AP68366 448 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 MAP7Q14244 749 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 ZXDCQ2QGD7 858 aaPredicted RBP19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 CYBRD1Q53TN4 286 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 TTC33Q6PID6 262 aaPredicted RBP19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 SUSD1Q6UWL2 747 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 RNF165Q6ZSG1 346 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 EP400NLQ6ZTU2 488 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms