RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 IRGCQ6NXR0 463 aa23.71■■□□□ 1.39
SDF2L1-201ENST00000248958 FAM129CQ86XR2 697 aa23.71■■□□□ 1.39
SDF2L1-201ENST00000248958 TBC1D21Q8IYX1 336 aa23.71■■□□□ 1.39
SDF2L1-201ENST00000248958 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.71■■□□□ 1.39
SDF2L1-201ENST00000248958 DDA1Q9BW61 102 aa23.71■■□□□ 1.39
SDF2L1-201ENST00000248958 ZNF768Q9H5H4 540 aaKnown RBP23.71■■□□□ 1.39
SDF2L1-201ENST00000248958 TFB2MQ9H5Q4 396 aaKnown RBP23.71■■□□□ 1.39
SDF2L1-201ENST00000248958 HRASLS2Q9NWW9 162 aa23.71■■□□□ 1.39
SDF2L1-201ENST00000248958 POLG2Q9UHN1 485 aa23.71■■□□□ 1.39
SDF2L1-201ENST00000248958 WDFY3Q8IZQ1 3526 aa23.71■■□□□ 1.39
SDF2L1-201ENST00000248958 EFCAB7A8K855 629 aa23.7■■□□□ 1.38
SDF2L1-201ENST00000248958 EFCAB8A8MWE9 144 aa23.7■■□□□ 1.38
SDF2L1-201ENST00000248958 AGRPO00253 132 aa23.7■■□□□ 1.38
SDF2L1-201ENST00000248958 TUBB4AP04350 444 aa23.7■■□□□ 1.38
SDF2L1-201ENST00000248958 ITGB6P18564 788 aa23.7■■□□□ 1.38
SDF2L1-201ENST00000248958 ABCG1P45844 678 aa23.7■■□□□ 1.38
SDF2L1-201ENST00000248958 MC2RQ01718 297 aa23.7■■□□□ 1.38
SDF2L1-201ENST00000248958 DHX9Q08211 1270 aaKnown RBP23.7■■□□□ 1.38
SDF2L1-201ENST00000248958 PRKAA1Q13131 559 aa23.7■■□□□ 1.38
SDF2L1-201ENST00000248958 CACHD1Q5VU97 1274 aa23.7■■□□□ 1.38
SDF2L1-201ENST00000248958 SLC22A15Q8IZD6 547 aa23.7■■□□□ 1.38
SDF2L1-201ENST00000248958 CARFQ8N187 725 aa23.7■■□□□ 1.38
SDF2L1-201ENST00000248958 AGGF1Q8N302 714 aaeCLIP23.7■■□□□ 1.38
SDF2L1-201ENST00000248958 UBXN4Q92575 508 aa23.7■■□□□ 1.38
SDF2L1-201ENST00000248958 LPGAT1Q92604 370 aa23.7■■□□□ 1.38
SDF2L1-201ENST00000248958 LRRC39Q96DD0 335 aa23.7■■□□□ 1.38
SDF2L1-201ENST00000248958 TEFMQ96QE5 360 aaKnown RBP23.7■■□□□ 1.38
SDF2L1-201ENST00000248958 EBNA1BP2Q99848 306 aaKnown RBP23.7■■□□□ 1.38
SDF2L1-201ENST00000248958 TRIM56Q9BRZ2 755 aaKnown RBP23.7■■□□□ 1.38
SDF2L1-201ENST00000248958 TRIM51Q9BSJ1 452 aa23.7■■□□□ 1.38
SDF2L1-201ENST00000248958 ASPSCR1Q9BZE9 553 aa23.7■■□□□ 1.38
SDF2L1-201ENST00000248958 TRIT1Q9H3H1 467 aaKnown RBP23.7■■□□□ 1.38
SDF2L1-201ENST00000248958 FBXO8Q9NRD0 319 aa23.7■■□□□ 1.38
SDF2L1-201ENST00000248958 OCIAD1Q9NX40 245 aa23.7■■□□□ 1.38
SDF2L1-201ENST00000248958 SLC39A1Q9NY26 324 aa23.7■■□□□ 1.38
SDF2L1-201ENST00000248958 ASF1AQ9Y294 204 aa23.7■■□□□ 1.38
SDF2L1-201ENST00000248958 IQCF5A8MTL0 148 aa23.69■■□□□ 1.38
SDF2L1-201ENST00000248958 BHMG1C9JSJ3 638 aaPredicted RBP23.69■■□□□ 1.38
SDF2L1-201ENST00000248958 PRAMEF10O60809 474 aa23.69■■□□□ 1.38
SDF2L1-201ENST00000248958 RASSF9O75901 435 aa23.69■■□□□ 1.38
SDF2L1-201ENST00000248958 SEC31AO94979 1220 aaKnown RBP23.69■■□□□ 1.38
SDF2L1-201ENST00000248958 AOAHP28039 575 aa23.69■■□□□ 1.38
SDF2L1-201ENST00000248958 LEPRP48357 1165 aaKnown RBP23.69■■□□□ 1.38
SDF2L1-201ENST00000248958 ITGA8P53708 1063 aa23.69■■□□□ 1.38
SDF2L1-201ENST00000248958 HSPA14Q0VDF9 509 aa23.69■■□□□ 1.38
SDF2L1-201ENST00000248958 SPANXN3Q5MJ09 141 aa23.69■■□□□ 1.38
SDF2L1-201ENST00000248958 ZNF470Q6ECI4 717 aa23.69■■□□□ 1.38
SDF2L1-201ENST00000248958 CYB5D1Q6P9G0 228 aa23.69■■□□□ 1.38
SDF2L1-201ENST00000248958 BMPERQ8N8U9 685 aa23.69■■□□□ 1.38
SDF2L1-201ENST00000248958 PHC3Q8NDX5 983 aa23.69■■□□□ 1.38
SDF2L1-201ENST00000248958 GSDMBQ8TAX9 411 aa23.69■■□□□ 1.38
SDF2L1-201ENST00000248958 LCN9Q8WX39 176 aa23.69■■□□□ 1.38
SDF2L1-201ENST00000248958 JPH3Q8WXH2 748 aaPredicted RBP23.69■■□□□ 1.38
SDF2L1-201ENST00000248958 BIRC8Q96P09 236 aa23.69■■□□□ 1.38
SDF2L1-201ENST00000248958 ZPBPQ9BS86 351 aa23.69■■□□□ 1.38
SDF2L1-201ENST00000248958 FAM167BQ9BTA0 163 aa23.69■■□□□ 1.38
SDF2L1-201ENST00000248958 SRMSQ9H3Y6 488 aa23.69■■□□□ 1.38
SDF2L1-201ENST00000248958 C20orf96Q9NUD7 363 aaPredicted RBP23.69■■□□□ 1.38
SDF2L1-201ENST00000248958 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.69■■□□□ 1.38
SDF2L1-201ENST00000248958 SEMA5BQ9P283 1151 aa23.69■■□□□ 1.38
SDF2L1-201ENST00000248958 C9orf172C9J069 976 aa23.68■■□□□ 1.38
SDF2L1-201ENST00000248958 SLCO2B1O94956 709 aa23.68■■□□□ 1.38
SDF2L1-201ENST00000248958 RPN2P04844 631 aa23.68■■□□□ 1.38
SDF2L1-201ENST00000248958 FMO4P31512 558 aa23.68■■□□□ 1.38
SDF2L1-201ENST00000248958 ARL4CP56559 192 aa23.68■■□□□ 1.38
SDF2L1-201ENST00000248958 CKAP4Q07065 602 aaKnown RBP23.68■■□□□ 1.38
SDF2L1-201ENST00000248958 BBS9Q3SYG4 887 aa23.68■■□□□ 1.38
SDF2L1-201ENST00000248958 PLEKHS1Q5SXH7 462 aa23.68■■□□□ 1.38
SDF2L1-201ENST00000248958 DCAF12Q5T6F0 453 aa23.68■■□□□ 1.38
SDF2L1-201ENST00000248958 BROXQ5VW32 411 aa23.68■■□□□ 1.38
SDF2L1-201ENST00000248958 CEACAM20Q6UY09 585 aa23.68■■□□□ 1.38
SDF2L1-201ENST00000248958 NAPRTQ6XQN6 538 aa23.68■■□□□ 1.38
SDF2L1-201ENST00000248958 CENPUQ71F23 418 aa23.68■■□□□ 1.38
SDF2L1-201ENST00000248958 OTOAQ7RTW8 1153 aa23.68■■□□□ 1.38
SDF2L1-201ENST00000248958 KMT5CQ86Y97 462 aa23.68■■□□□ 1.38
SDF2L1-201ENST00000248958 KRT222Q8N1A0 295 aa23.68■■□□□ 1.38
SDF2L1-201ENST00000248958 OR4E2Q8NGC2 313 aa23.68■■□□□ 1.38
SDF2L1-201ENST00000248958 OR52E1Q8NGJ3 308 aa23.68■■□□□ 1.38
SDF2L1-201ENST00000248958 OR5K2Q8NHB8 316 aa23.68■■□□□ 1.38
SDF2L1-201ENST00000248958 LKAAEAR1Q8TD35 194 aa23.68■■□□□ 1.38
SDF2L1-201ENST00000248958 KLHL6Q8WZ60 621 aa23.68■■□□□ 1.38
SDF2L1-201ENST00000248958 ART4Q93070 314 aa23.68■■□□□ 1.38
SDF2L1-201ENST00000248958 C16orf45Q96MC5 204 aaPredicted RBP23.68■■□□□ 1.38
SDF2L1-201ENST00000248958 CDYLQ9Y232 598 aa23.68■■□□□ 1.38
SDF2L1-201ENST00000248958 PCDHB11Q9Y5F2 797 aa23.68■■□□□ 1.38
SDF2L1-201ENST00000248958 MRFAP1Q9Y605 127 aa23.68■■□□□ 1.38
SDF2L1-201ENST00000248958 OR6C74A6NCV1 312 aa23.67■■□□□ 1.38
SDF2L1-201ENST00000248958 TLCD2A6NGC4 264 aa23.67■■□□□ 1.38
SDF2L1-201ENST00000248958 LIPCP11150 499 aa23.67■■□□□ 1.38
SDF2L1-201ENST00000248958 PKMP14618 531 aaKnown RBP23.67■■□□□ 1.38
SDF2L1-201ENST00000248958 CRYMQ14894 314 aa23.67■■□□□ 1.38
SDF2L1-201ENST00000248958 HIF1AQ16665 826 aa23.67■■□□□ 1.38
SDF2L1-201ENST00000248958 CTSL3PQ5NE16 218 aa23.67■■□□□ 1.38
SDF2L1-201ENST00000248958 DNTTIP2Q5QJE6 756 aaKnown RBP23.67■■□□□ 1.38
SDF2L1-201ENST00000248958 FAM92BQ6ZTR7 304 aa23.67■■□□□ 1.38
SDF2L1-201ENST00000248958 ZNF572Q7Z3I7 529 aaPredicted RBP23.67■■□□□ 1.38
SDF2L1-201ENST00000248958 SPACA3Q8IXA5 215 aa23.67■■□□□ 1.38
SDF2L1-201ENST00000248958 HNRNPLLQ8WVV9 542 aaKnown RBP23.67■■□□□ 1.38
SDF2L1-201ENST00000248958 HGH1Q9BTY7 390 aa23.67■■□□□ 1.38
SDF2L1-201ENST00000248958 TRIM31Q9BZY9 425 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms