RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 PRM3Q9NNZ6 103 aa15.47■□□□□ 0.07
LRFN1-201ENST00000248668 B4GALT6Q9UBX8 382 aa15.47■□□□□ 0.07
LRFN1-201ENST00000248668 LZTS1Q9Y250 596 aa15.47■□□□□ 0.07
LRFN1-201ENST00000248668 PCDHA9Q9Y5H5 950 aa15.47■□□□□ 0.07
LRFN1-201ENST00000248668 LOC730098B7Z3J9 87 aa15.46■□□□□ 0.07
LRFN1-201ENST00000248668 OTCP00480 354 aa15.46■□□□□ 0.07
LRFN1-201ENST00000248668 B4GALNT1Q00973 533 aa15.46■□□□□ 0.07
LRFN1-201ENST00000248668 GPRC6AQ5T6X5 926 aa15.46■□□□□ 0.07
LRFN1-201ENST00000248668 GRAMD4Q6IC98 578 aa15.46■□□□□ 0.07
LRFN1-201ENST00000248668 EFL1Q7Z2Z2 1120 aaKnown RBP15.46■□□□□ 0.07
LRFN1-201ENST00000248668 MARVELD2Q8N4S9 558 aa15.46■□□□□ 0.07
LRFN1-201ENST00000248668 TMEM199Q8N511 208 aa15.46■□□□□ 0.07
LRFN1-201ENST00000248668 ING5Q8WYH8 240 aa15.46■□□□□ 0.07
LRFN1-201ENST00000248668 GRIP2Q9C0E4 1043 aa15.46■□□□□ 0.07
LRFN1-201ENST00000248668 ACTL8Q9H568 366 aa15.46■□□□□ 0.07
LRFN1-201ENST00000248668 ARL15Q9NXU5 204 aa15.46■□□□□ 0.07
LRFN1-201ENST00000248668 LEF1Q9UJU2 399 aaPredicted RBP15.46■□□□□ 0.07
LRFN1-201ENST00000248668 PTBP2Q9UKA9 531 aaKnown RBP15.46■□□□□ 0.07
LRFN1-201ENST00000248668 RAB26Q9ULW5 256 aa15.46■□□□□ 0.07
LRFN1-201ENST00000248668 TNPO3Q9Y5L0 923 aaKnown RBP15.46■□□□□ 0.07
LRFN1-201ENST00000248668 PLOD2O00469 737 aa15.46■□□□□ 0.07
LRFN1-201ENST00000248668 LSM1O15116 133 aaKnown RBP15.46■□□□□ 0.07
LRFN1-201ENST00000248668 DENRO43583 198 aaKnown RBP15.46■□□□□ 0.07
LRFN1-201ENST00000248668 SOCS5O75159 536 aa15.46■□□□□ 0.07
LRFN1-201ENST00000248668 PRKG2Q13237 762 aa15.46■□□□□ 0.07
LRFN1-201ENST00000248668 PCBP2Q15366 365 aaKnown RBP eCLIP15.46■□□□□ 0.07
LRFN1-201ENST00000248668 COPS8Q99627 209 aa15.46■□□□□ 0.07
LRFN1-201ENST00000248668 BRD9Q9H8M2 597 aa15.46■□□□□ 0.07
LRFN1-201ENST00000248668 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.46■□□□□ 0.07
LRFN1-201ENST00000248668 A0A0J9YVX5 310 aa15.45■□□□□ 0.06
LRFN1-201ENST00000248668 CCR7P32248 378 aa15.45■□□□□ 0.06
LRFN1-201ENST00000248668 NEK2P51955 445 aa15.45■□□□□ 0.06
LRFN1-201ENST00000248668 PRKCQQ04759 706 aa15.45■□□□□ 0.06
LRFN1-201ENST00000248668 MAP7Q14244 749 aa15.45■□□□□ 0.06
LRFN1-201ENST00000248668 TPRG1Q6ZUI0 275 aa15.45■□□□□ 0.06
LRFN1-201ENST00000248668 USP45Q70EL2 814 aa15.45■□□□□ 0.06
LRFN1-201ENST00000248668 VRK3Q8IV63 474 aa15.45■□□□□ 0.06
LRFN1-201ENST00000248668 CBR4Q8N4T8 237 aa15.45■□□□□ 0.06
LRFN1-201ENST00000248668 VOPP1Q96AW1 172 aa15.45■□□□□ 0.06
LRFN1-201ENST00000248668 RHBDF1Q96CC6 855 aa15.45■□□□□ 0.06
LRFN1-201ENST00000248668 BRINP2Q9C0B6 783 aa15.45■□□□□ 0.06
LRFN1-201ENST00000248668 PAIP2BQ9ULR5 123 aaKnown RBP15.45■□□□□ 0.06
LRFN1-201ENST00000248668 SMIM18P0DKX4 95 aa15.45■□□□□ 0.06
LRFN1-201ENST00000248668 CD9P21926 228 aa15.45■□□□□ 0.06
LRFN1-201ENST00000248668 PSMA4P25789 261 aaKnown RBP15.45■□□□□ 0.06
LRFN1-201ENST00000248668 PPM1AP35813 382 aa15.45■□□□□ 0.06
LRFN1-201ENST00000248668 OR4D2P58180 307 aa15.45■□□□□ 0.06
LRFN1-201ENST00000248668 IMPG1Q17R60 797 aa15.45■□□□□ 0.06
LRFN1-201ENST00000248668 KRTCAP2Q8N6L1 136 aa15.45■□□□□ 0.06
LRFN1-201ENST00000248668 SCRN2Q96FV2 425 aa15.45■□□□□ 0.06
LRFN1-201ENST00000248668 ZNF490Q9ULM2 529 aaPredicted RBP15.45■□□□□ 0.06
LRFN1-201ENST00000248668 OARD1Q9Y530 152 aa15.45■□□□□ 0.06
LRFN1-201ENST00000248668 WNT6Q9Y6F9 365 aa15.45■□□□□ 0.06
LRFN1-201ENST00000248668 ADH1AP07327 375 aa15.45■□□□□ 0.06
LRFN1-201ENST00000248668 PRMT9Q6P2P2 845 aa15.45■□□□□ 0.06
LRFN1-201ENST00000248668 PDPRQ8NCN5 879 aa15.45■□□□□ 0.06
LRFN1-201ENST00000248668 PDLIM5Q96HC4 596 aaKnown RBP15.45■□□□□ 0.06
LRFN1-201ENST00000248668 PFDN4Q9NQP4 134 aa15.45■□□□□ 0.06
LRFN1-201ENST00000248668 SEC22BO75396 215 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 EEDO75530 441 aaKnown RBP15.44■□□□□ 0.06
LRFN1-201ENST00000248668 RPS3P23396 243 aaKnown RBP eCLIP15.44■□□□□ 0.06
LRFN1-201ENST00000248668 GRM2Q14416 872 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 INPP5AQ14642 412 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 LY6G5CQ5SRR4 150 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 SLC22A15Q8IZD6 547 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 CPXM2Q8N436 756 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 HTATIP2Q9BUP3 242 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 CD244Q9BZW8 370 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 CXXC1Q9P0U4 656 aaPredicted RBP15.44■□□□□ 0.06
LRFN1-201ENST00000248668 SLC25A13Q9UJS0 675 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 XIRP2A4UGR9 3374 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 TRBV5-4A0A0C4DH59 114 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 RNF103-CHMP3A0A140T963 221 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 FAM234BA2RU67 622 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 OR2AG2A6NM03 316 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 CLIC3O95833 236 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 GLUD1P00367 558 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 C1SP09871 688 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 TYRP14679 529 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 MAPK8P45983 427 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 RPIAP49247 311 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 PDCD4Q53EL6 469 aaKnown RBP15.44■□□□□ 0.06
LRFN1-201ENST00000248668 ZFAND4Q86XD8 727 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 RNF175Q8N4F7 328 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 FOXJ1Q92949 421 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 ACTR8Q9H981 624 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 OBSL1O75147 1896 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 CHD9Q3L8U1 2897 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 SEC24DO94855 1032 aaPredicted RBP15.44■□□□□ 0.06
LRFN1-201ENST00000248668 CLPTM1O96005 669 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 TIMP1P01033 207 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 FAM58BPP0C7Q3 252 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 HSD17B1P14061 328 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 IL10P22301 178 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 ITPKAP23677 461 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 RPL26P61254 145 aaKnown RBP15.44■□□□□ 0.06
LRFN1-201ENST00000248668 LILRA6Q6PI73 481 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 ERMP1Q7Z2K6 904 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 TRIM54Q9BYV2 358 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 ATG10Q9H0Y0 220 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms