RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 LGR4Q9BXB1 951 aa18.33■□□□□ 0.52
TNFSF9-201ENST00000245817 ACTR5Q9H9F9 607 aaPredicted RBP18.33■□□□□ 0.52
TNFSF9-201ENST00000245817 TCF7L2Q9NQB0 619 aa18.33■□□□□ 0.52
TNFSF9-201ENST00000245817 ITM2CQ9NQX7 267 aa18.33■□□□□ 0.52
TNFSF9-201ENST00000245817 OPTCQ9UBM4 332 aa18.33■□□□□ 0.52
TNFSF9-201ENST00000245817 DNMT3AQ9Y6K1 912 aaPredicted RBP18.33■□□□□ 0.52
TNFSF9-201ENST00000245817 LRRK1Q38SD2 2015 aa18.33■□□□□ 0.52
TNFSF9-201ENST00000245817 PIKFYVEQ9Y2I7 2098 aa18.33■□□□□ 0.52
TNFSF9-201ENST00000245817 MGAT4DA6NG13 374 aa18.32■□□□□ 0.52
TNFSF9-201ENST00000245817 TMEM233B4DJY2 109 aa18.32■□□□□ 0.52
TNFSF9-201ENST00000245817 CHURC1-FNTBB4DL54 471 aa18.32■□□□□ 0.52
TNFSF9-201ENST00000245817 ATP5HO75947 161 aa18.32■□□□□ 0.52
TNFSF9-201ENST00000245817 FGF4P08620 206 aa18.32■□□□□ 0.52
TNFSF9-201ENST00000245817 MYCLP1P12525 358 aaPredicted RBP18.32■□□□□ 0.52
TNFSF9-201ENST00000245817 NCF2P19878 526 aaPredicted RBP18.32■□□□□ 0.52
TNFSF9-201ENST00000245817 HSPA7P48741 367 aa18.32■□□□□ 0.52
TNFSF9-201ENST00000245817 ARHGAP8P85298 464 aa18.32■□□□□ 0.52
TNFSF9-201ENST00000245817 PLA2G4EQ3MJ16 856 aa18.32■□□□□ 0.52
TNFSF9-201ENST00000245817 NXNQ6DKJ4 435 aa18.32■□□□□ 0.52
TNFSF9-201ENST00000245817 TTC23LQ6PF05 361 aa18.32■□□□□ 0.52
TNFSF9-201ENST00000245817 AMZ2Q86W34 360 aa18.32■□□□□ 0.52
TNFSF9-201ENST00000245817 NECAB3Q96P71 396 aaPredicted RBP18.32■□□□□ 0.52
TNFSF9-201ENST00000245817 UHRF1Q96T88 793 aaPredicted RBP18.32■□□□□ 0.52
TNFSF9-201ENST00000245817 CD244Q9BZW8 370 aa18.32■□□□□ 0.52
TNFSF9-201ENST00000245817 NMUR2Q9GZQ4 415 aa18.32■□□□□ 0.52
TNFSF9-201ENST00000245817 TXLNGQ9NUQ3 528 aa18.32■□□□□ 0.52
TNFSF9-201ENST00000245817 GOLGA8QA0A0J9YX86 632 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 KANSL1LA0AUZ9 987 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 GOLGA8OA6NCC3 632 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 KLHL33A6NCF5 533 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 GOLGA8NF8WBI6 632 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 CACNB4O00305 520 aaPredicted RBP18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 AZIN1O14977 448 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 CHUKO15111 745 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 KMOO15229 486 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 SKAP2O75563 359 aaPredicted RBP18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 MATN4O95460 622 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 CHEK2O96017 543 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 TARSP26639 723 aaKnown RBP18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 ACSL1P33121 698 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 BNIP1Q12981 228 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 GTF2H2Q13888 395 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 METTL21CQ5VZV1 264 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 GTF2H2CQ6P1K8 395 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 TRIM69Q86WT6 500 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 ZNF547Q8IVP9 402 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 LILRA3Q8N6C8 439 aaPredicted RBP18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 TEX9Q8N6V9 391 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 TSTD1Q8NFU3 115 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 MAPK15Q8TD08 544 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 AGAP11Q8TF27 550 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 UBTD2Q8WUN7 234 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 STON2Q8WXE9 905 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 FOXJ1Q92949 421 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 CD320Q9NPF0 282 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 ZNHIT2Q9UHR6 403 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 TRPM6Q9BX84 2022 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 FAM170BA6NMN3 283 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 FPGTO14772 594 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 TAPBPO15533 448 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 PSIP1O75475 530 aaKnown RBP18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 STK16O75716 305 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 ESRRBO95718 433 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 EPHA3P29320 983 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 PIK3CGP48736 1102 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 PKNOX1P55347 436 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 PPP2CBP62714 309 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 PPP2CAP67775 309 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 TBCCQ15814 346 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 C18orf21Q32NC0 220 aaPredicted RBP18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 CLEC6AQ6EIG7 209 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 GPRIN3Q6ZVF9 776 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 EFL1Q7Z2Z2 1120 aaKnown RBP18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 GOLGA7Q7Z5G4 137 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 CCDC28BQ9BUN5 200 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 APOOQ9BUR5 198 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 DPEP2Q9H4A9 486 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 WDR55Q9H6Y2 383 aaPredicted RBP18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 NOL11Q9H8H0 719 aaKnown RBP18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 ZBTB26Q9HCK0 441 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 LTB4R2Q9NPC1 389 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 FZD3Q9NPG1 666 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 PFDN4Q9NQP4 134 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 SAR1AQ9NR31 198 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 PRKAB1Q9Y478 270 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 A0A0C4DFX4 3053 aa18.31■□□□□ 0.52
TNFSF9-201ENST00000245817 ANKRD65E5RJM6 399 aa18.3■□□□□ 0.52
TNFSF9-201ENST00000245817 K7EPI3 171 aa18.3■□□□□ 0.52
TNFSF9-201ENST00000245817 STK25O00506 426 aa18.3■□□□□ 0.52
TNFSF9-201ENST00000245817 PPP6CO00743 305 aa18.3■□□□□ 0.52
TNFSF9-201ENST00000245817 SEMA4FO95754 770 aa18.3■□□□□ 0.52
TNFSF9-201ENST00000245817 OTCP00480 354 aa18.3■□□□□ 0.52
TNFSF9-201ENST00000245817 PDHA2P29803 388 aa18.3■□□□□ 0.52
TNFSF9-201ENST00000245817 IGFALSP35858 605 aa18.3■□□□□ 0.52
TNFSF9-201ENST00000245817 STARD6P59095 220 aa18.3■□□□□ 0.52
TNFSF9-201ENST00000245817 BTKQ06187 659 aa18.3■□□□□ 0.52
TNFSF9-201ENST00000245817 TUBB3Q13509 450 aa18.3■□□□□ 0.52
TNFSF9-201ENST00000245817 MBOAT1Q6ZNC8 495 aa18.3■□□□□ 0.52
TNFSF9-201ENST00000245817 SIX5Q8N196 739 aa18.3■□□□□ 0.52
TNFSF9-201ENST00000245817 DENND6BQ8NEG7 585 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms