RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 KCTD5Q9NXV2 234 aa13.66□□□□□ -0.22
TARDBP-201ENST00000240185 HACL1Q9UJ83 578 aa13.66□□□□□ -0.22
TARDBP-201ENST00000240185 ABCA6Q8N139 1617 aa13.66□□□□□ -0.22
TARDBP-201ENST00000240185 C13orf42A0A1B0GVH6 325 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 IQCF5A8MTL0 148 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 GADD45AP24522 165 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 ENTPD1P49961 510 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 AIMP2Q13155 320 aaKnown RBP13.65□□□□□ -0.22
TARDBP-201ENST00000240185 TEX44Q53QW1 395 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 RANBP3LQ86VV4 465 aaPredicted RBP13.65□□□□□ -0.22
TARDBP-201ENST00000240185 PACRGLQ8N7B6 248 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 NXPE2Q96DL1 559 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 PPM1HQ9ULR3 514 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 PNPLA6Q8IY17 1366 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 SMAD9O15198 467 aaKnown RBP13.65□□□□□ -0.22
TARDBP-201ENST00000240185 TBL1XO60907 577 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 INMTO95050 263 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 GJA1P17302 382 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 PSMA6P60900 246 aaKnown RBP13.65□□□□□ -0.22
TARDBP-201ENST00000240185 FAM174BQ3ZCQ3 159 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 FBXO43Q4G163 708 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 PABPC1LQ4VXU2 614 aaKnown RBP13.65□□□□□ -0.22
TARDBP-201ENST00000240185 KIAA1161Q6NSJ0 714 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 LRRN1Q6UXK5 716 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 TMED4Q7Z7H5 227 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 TDRPQ86YL5 185 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 OR4K2Q8NGD2 314 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 SNIP1Q8TAD8 396 aaKnown RBP13.65□□□□□ -0.22
TARDBP-201ENST00000240185 PORCNQ9H237 461 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 TMEM134Q9H6X4 195 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 PCDHB1Q9Y5F3 818 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 CDC42BPGQ6DT37 1551 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 TCRBV7S2A1N4TA0A589 114 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 ARL5CA6NH57 179 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 NUAK1O60285 661 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 ITGA10O75578 1167 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 OR4F21O95013 312 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 PRAMEF12O95522 483 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 CYB5AP00167 134 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 CES1P23141 567 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 GBX2P52951 348 aaPredicted RBP13.65□□□□□ -0.22
TARDBP-201ENST00000240185 PAMR1Q6UXH9 720 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 LRRC70Q7Z2Q7 622 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 CANT1Q8WVQ1 401 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 SAV1Q9H4B6 383 aaPredicted RBP13.65□□□□□ -0.22
TARDBP-201ENST00000240185 NKX1-2Q9UD57 310 aaPredicted RBP13.65□□□□□ -0.22
TARDBP-201ENST00000240185 ST14Q9Y5Y6 855 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 MEN1O00255 615 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 GMFGO60234 142 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 TSPAN1O60635 241 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 CSF2P04141 144 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 CREB1P16220 341 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 PVALBP20472 110 aaPredicted RBP13.65□□□□□ -0.22
TARDBP-201ENST00000240185 RAB5BP61020 215 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 TGFB2P61812 414 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 RASGEF1BQ0VAM2 473 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 OR10G2Q8NGC3 310 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 OR6K6Q8NGW6 343 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 C15orf40Q8WUR7 153 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 C10orf82Q8WW14 230 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 EBF4Q9BQW3 602 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 HCN2Q9UL51 889 aa13.65□□□□□ -0.22
TARDBP-201ENST00000240185 OVOS2A0A0J9YW53 1432 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 OVOS2Q6IE36 1432 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 APOC3P02656 99 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 PRPS2P11908 318 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 MLLT6P55198 1093 aaPredicted RBP13.64□□□□□ -0.23
TARDBP-201ENST00000240185 GFOD2Q3B7J2 385 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 SNX29P2Q8IUI4 249 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 PCSK9Q8NBP7 692 aaKnown RBP13.64□□□□□ -0.23
TARDBP-201ENST00000240185 NUDT4Q9NZJ9 180 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 CDH7Q9ULB5 785 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 ENTPD6O75354 484 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 RP2O75695 350 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 ZNF823P16415 610 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 CBX2Q14781 532 aaPredicted RBP13.64□□□□□ -0.23
TARDBP-201ENST00000240185 PDE12Q6L8Q7 609 aaKnown RBP13.64□□□□□ -0.23
TARDBP-201ENST00000240185 RHBDF2Q6PJF5 856 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 ADGRG6Q86SQ4 1221 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 SLC9A9Q8IVB4 645 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 ZNF676Q8N7Q3 588 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 POGLUT1Q8NBL1 392 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 DNAJC19Q96DA6 116 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 PRMT6Q96LA8 375 aaPredicted RBP13.64□□□□□ -0.23
TARDBP-201ENST00000240185 SCGB3A2Q96PL1 93 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 IL4I1Q96RQ9 567 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 LRRC3Q9BY71 257 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 PRRG4Q9BZD6 226 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 UBQLN2Q9UHD9 624 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 A0A1B0GVC2 190 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 SLC22A2O15244 555 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 EPCAMP16422 314 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 F8A1P23610 371 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 APLP1P51693 650 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 GTF2A2P52657 109 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 TGFBIQ15582 683 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 TSTQ16762 297 aaKnown RBP13.64□□□□□ -0.23
TARDBP-201ENST00000240185 ALG10Q5BKT4 473 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 RAVER1Q8IY67 606 aaKnown RBP13.64□□□□□ -0.23
TARDBP-201ENST00000240185 SLC7A6OSQ96CW6 309 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms