RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 OTOL1A6NHN0 477 aaPredicted RBP22.79■■□□□ 1.24
MSX2-201ENST00000239243 ATP6V1C1P21283 382 aa22.79■■□□□ 1.24
MSX2-201ENST00000239243 GDF5P43026 501 aa22.79■■□□□ 1.24
MSX2-201ENST00000239243 GRIN2CQ14957 1233 aa22.79■■□□□ 1.24
MSX2-201ENST00000239243 PPP3R2Q96LZ3 170 aa22.79■■□□□ 1.24
MSX2-201ENST00000239243 ZNF570Q96NI8 536 aa22.79■■□□□ 1.24
MSX2-201ENST00000239243 VCX3BQ9H321 246 aa22.79■■□□□ 1.24
MSX2-201ENST00000239243 HPS4Q9NQG7 708 aa22.79■■□□□ 1.24
MSX2-201ENST00000239243 MBD1Q9UIS9 605 aaPredicted RBP22.79■■□□□ 1.24
MSX2-201ENST00000239243 GFYI3L273 518 aa22.78■■□□□ 1.24
MSX2-201ENST00000239243 FCARP24071 287 aa22.78■■□□□ 1.24
MSX2-201ENST00000239243 EMX2Q04743 252 aa22.78■■□□□ 1.24
MSX2-201ENST00000239243 MESP2Q0VG99 397 aa22.78■■□□□ 1.24
MSX2-201ENST00000239243 RCAN2Q14206 197 aa22.78■■□□□ 1.24
MSX2-201ENST00000239243 ZNF234Q14588 700 aa22.78■■□□□ 1.24
MSX2-201ENST00000239243 SMU1Q2TAY7 513 aa22.78■■□□□ 1.24
MSX2-201ENST00000239243 SERPINA13PQ6UXR4 307 aa22.78■■□□□ 1.24
MSX2-201ENST00000239243 MCOLN3Q8TDD5 553 aa22.78■■□□□ 1.24
MSX2-201ENST00000239243 DTD2Q96FN9 168 aa22.78■■□□□ 1.24
MSX2-201ENST00000239243 PBX4Q9BYU1 374 aa22.78■■□□□ 1.24
MSX2-201ENST00000239243 HEBP1Q9NRV9 189 aa22.78■■□□□ 1.24
MSX2-201ENST00000239243 TMEM181Q9P2C4 612 aa22.78■■□□□ 1.24
MSX2-201ENST00000239243 KIF26AQ9ULI4 1882 aaPredicted RBP22.78■■□□□ 1.24
MSX2-201ENST00000239243 CHD9Q3L8U1 2897 aa22.78■■□□□ 1.24
MSX2-201ENST00000239243 KIAA1549LQ6ZVL6 1849 aa22.78■■□□□ 1.24
MSX2-201ENST00000239243 SGTAO43765 313 aa22.78■■□□□ 1.24
MSX2-201ENST00000239243 SLC22A3O75751 556 aa22.78■■□□□ 1.24
MSX2-201ENST00000239243 CAPN3P20807 821 aa22.78■■□□□ 1.24
MSX2-201ENST00000239243 HTR6P50406 440 aa22.78■■□□□ 1.24
MSX2-201ENST00000239243 FOXM1Q08050 763 aa22.78■■□□□ 1.24
MSX2-201ENST00000239243 TRIM25Q14258 630 aaKnown RBP22.78■■□□□ 1.24
MSX2-201ENST00000239243 NR6A1Q15406 480 aa22.78■■□□□ 1.24
MSX2-201ENST00000239243 VPS26BQ4G0F5 336 aa22.78■■□□□ 1.24
MSX2-201ENST00000239243 DSG4Q86SJ6 1040 aa22.78■■□□□ 1.24
MSX2-201ENST00000239243 RNF148Q8N7C7 305 aa22.78■■□□□ 1.24
MSX2-201ENST00000239243 SPDL1Q96EA4 605 aa22.78■■□□□ 1.24
MSX2-201ENST00000239243 COQ10AQ96MF6 247 aa22.78■■□□□ 1.24
MSX2-201ENST00000239243 SLC29A3Q9BZD2 475 aa22.78■■□□□ 1.24
MSX2-201ENST00000239243 TMEM245Q9H330 911 aa22.78■■□□□ 1.24
MSX2-201ENST00000239243 MSRAQ9UJ68 235 aa22.78■■□□□ 1.24
MSX2-201ENST00000239243 CDH7Q9ULB5 785 aa22.78■■□□□ 1.24
MSX2-201ENST00000239243 A0A1W2PP18 115 aa22.77■■□□□ 1.24
MSX2-201ENST00000239243 DYTNA2CJ06 578 aa22.77■■□□□ 1.24
MSX2-201ENST00000239243 SLC28A1O00337 649 aa22.77■■□□□ 1.24
MSX2-201ENST00000239243 RGS14O43566 566 aa22.77■■□□□ 1.24
MSX2-201ENST00000239243 ATG13O75143 517 aa22.77■■□□□ 1.24
MSX2-201ENST00000239243 HLA-EP13747 358 aa22.77■■□□□ 1.24
MSX2-201ENST00000239243 MAGEA10P43363 369 aaPredicted RBP22.77■■□□□ 1.24
MSX2-201ENST00000239243 MAPK9P45984 424 aa22.77■■□□□ 1.24
MSX2-201ENST00000239243 FCHO2Q0JRZ9 810 aa22.77■■□□□ 1.24
MSX2-201ENST00000239243 MAP7D1Q3KQU3 841 aa22.77■■□□□ 1.24
MSX2-201ENST00000239243 ZNF765Q7L2R6 523 aa22.77■■□□□ 1.24
MSX2-201ENST00000239243 NKX2-4Q9H2Z4 354 aa22.77■■□□□ 1.24
MSX2-201ENST00000239243 DYRK4Q9NR20 520 aa22.77■■□□□ 1.24
MSX2-201ENST00000239243 LSM1O15116 133 aaKnown RBP22.77■■□□□ 1.24
MSX2-201ENST00000239243 SLCO2B1O94956 709 aa22.77■■□□□ 1.24
MSX2-201ENST00000239243 TRAP1Q12931 704 aaKnown RBP22.77■■□□□ 1.24
MSX2-201ENST00000239243 MAD2L1Q13257 205 aaPredicted RBP22.77■■□□□ 1.24
MSX2-201ENST00000239243 TANGO2Q6ICL3 276 aa22.77■■□□□ 1.24
MSX2-201ENST00000239243 VITQ6UXI7 678 aa22.77■■□□□ 1.24
MSX2-201ENST00000239243 MBOAT1Q6ZNC8 495 aa22.77■■□□□ 1.24
MSX2-201ENST00000239243 RETREG3Q86VR2 466 aa22.77■■□□□ 1.24
MSX2-201ENST00000239243 VRK3Q8IV63 474 aa22.77■■□□□ 1.24
MSX2-201ENST00000239243 SFRP1Q8N474 314 aa22.77■■□□□ 1.24
MSX2-201ENST00000239243 MINDY1Q8N5J2 469 aa22.77■■□□□ 1.24
MSX2-201ENST00000239243 BHLHE22Q8NFJ8 381 aaPredicted RBP22.77■■□□□ 1.24
MSX2-201ENST00000239243 WRAP53Q9BUR4 548 aaKnown RBP22.77■■□□□ 1.24
MSX2-201ENST00000239243 IGFLR1Q9H665 355 aa22.77■■□□□ 1.24
MSX2-201ENST00000239243 ITM2BQ9Y287 266 aa22.77■■□□□ 1.24
MSX2-201ENST00000239243 TBC1D3BA6NDS4 549 aa22.76■■□□□ 1.23
MSX2-201ENST00000239243 OR2AG2A6NM03 316 aa22.76■■□□□ 1.23
MSX2-201ENST00000239243 ACOT8O14734 319 aa22.76■■□□□ 1.23
MSX2-201ENST00000239243 ULK1O75385 1050 aa22.76■■□□□ 1.23
MSX2-201ENST00000239243 CLDN9O95484 217 aa22.76■■□□□ 1.23
MSX2-201ENST00000239243 PRLHRP49683 370 aa22.76■■□□□ 1.23
MSX2-201ENST00000239243 MS4A2Q01362 244 aa22.76■■□□□ 1.23
MSX2-201ENST00000239243 RUNX3Q13761 415 aa22.76■■□□□ 1.23
MSX2-201ENST00000239243 ABRAXAS2Q15018 415 aa22.76■■□□□ 1.23
MSX2-201ENST00000239243 RAB30Q15771 203 aa22.76■■□□□ 1.23
MSX2-201ENST00000239243 SYTL3Q4VX76 610 aa22.76■■□□□ 1.23
MSX2-201ENST00000239243 LAYNQ6UX15 382 aa22.76■■□□□ 1.23
MSX2-201ENST00000239243 TMEM184AQ6ZMB5 413 aa22.76■■□□□ 1.23
MSX2-201ENST00000239243 YAF2Q8IY57 180 aa22.76■■□□□ 1.23
MSX2-201ENST00000239243 SUSD6Q92537 303 aa22.76■■□□□ 1.23
MSX2-201ENST00000239243 ARRDC3Q96B67 414 aa22.76■■□□□ 1.23
MSX2-201ENST00000239243 ZNF184Q99676 751 aaPredicted RBP22.76■■□□□ 1.23
MSX2-201ENST00000239243 C1orf50Q9BV19 199 aa22.76■■□□□ 1.23
MSX2-201ENST00000239243 ZCCHC2Q9C0B9 1178 aaKnown RBP22.76■■□□□ 1.23
MSX2-201ENST00000239243 PSMD13Q9UNM6 376 aa22.76■■□□□ 1.23
MSX2-201ENST00000239243 TMEM115Q12893 351 aaPredicted RBP22.76■■□□□ 1.23
MSX2-201ENST00000239243 GLMNQ92990 594 aa22.76■■□□□ 1.23
MSX2-201ENST00000239243 TMEM159Q96B96 161 aa22.76■■□□□ 1.23
MSX2-201ENST00000239243 MAGEB10Q96LZ2 347 aaPredicted RBP22.76■■□□□ 1.23
MSX2-201ENST00000239243 GPATCH1Q9BRR8 931 aaKnown RBP22.76■■□□□ 1.23
MSX2-201ENST00000239243 EPHX3Q9H6B9 360 aa22.76■■□□□ 1.23
MSX2-201ENST00000239243 C6orf203Q9P0P8 240 aaPredicted RBP22.76■■□□□ 1.23
MSX2-201ENST00000239243 MAP10Q9P2G4 905 aa22.76■■□□□ 1.23
MSX2-201ENST00000239243 CD300AQ9UGN4 299 aa22.76■■□□□ 1.23
MSX2-201ENST00000239243 FAM234BA2RU67 622 aa22.75■■□□□ 1.23
MSX2-201ENST00000239243 LOC730098B7Z3J9 87 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms